Miyakogusa Predicted Gene

Lj5g3v1696930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1696930.1 Non Characterized Hit- tr|C0PRG5|C0PRG5_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,31.63,0.0001,coiled-coil,NULL; seg,NULL,CUFF.55739.1
         (372 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g089980.1 | hypothetical protein | HC | chr1:40300374-4029...   435   e-122
Medtr7g094470.1 | transmembrane protein, putative | HC | chr7:37...   339   3e-93

>Medtr1g089980.1 | hypothetical protein | HC |
           chr1:40300374-40296904 | 20130731
          Length = 413

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/374 (60%), Positives = 268/374 (71%), Gaps = 15/374 (4%)

Query: 1   MLQKLCLMTSHGCPPGLALQQELAMMGSIMKACQCQXXXXXXXXXXEILRYQSPSLRLNP 60
           M QKLC+M SHG P      QE AM G       CQ          +I+RYQSP+LRLN 
Sbjct: 2   MSQKLCVMASHGFP-----SQEYAMKG-------CQQLVPCYAPKPDIVRYQSPNLRLNS 49

Query: 61  YETRMM--QDEWFSWNPFVNLDMSTLRPVFPVIQETFPRTVLFSLGVVKQFNEHDQFLQS 118
           +E   M    EWF+ N FV+ D+S L+P+   +Q T P TVLFS GVV Q  EHD+    
Sbjct: 50  FEESRMTTSKEWFNSNQFVDFDLSALKPMVIDVQATCPSTVLFSFGVVGQCTEHDKTSLC 109

Query: 119 ITSDTAEAGLGGAHIDLLSNLMDLQLSGIDERQQLFPSLVYPNSKLYISKPLLDIFQSSA 178
           ITS+TAEA + G    LLS+LM LQLSGI+  Q     L+YPN   YISKPLLDIFQ SA
Sbjct: 110 ITSETAEAVVDGVRKALLSDLMGLQLSGINIPQMSLHPLIYPNRTFYISKPLLDIFQDSA 169

Query: 179 FSSKITVHPDGQVTFMGTTIEMKNLLSLVAESYSSECTMHMGEKRSMVIPYFTRLKIKKV 238
            SSK TVH +GQVTFMGT IEMK+ L++VAESY S+ T H GEK+SM++P+F+RL I +V
Sbjct: 170 LSSKFTVHLNGQVTFMGTEIEMKDFLAIVAESYVSKRT-HNGEKQSMLVPHFSRLNINEV 228

Query: 239 EARSLSSTLDINSTLAVPLRSPXXXXXXXXXXXXXXXARERDLYKKNYVHACESLLFLMV 298
           EARS+S TLDI+STL VPL+SP               ARERDL+KKNY+HACESLLFLM 
Sbjct: 229 EARSISPTLDIHSTLTVPLKSPEKVKAKPSRKKKKKVARERDLFKKNYIHACESLLFLMA 288

Query: 299 DKRQNRKTAILSLKKSGPELPDLLTQFSAGIAGTGLAVLLTVVCKLATGRVPFCTSKLFS 358
           DKR +R+TAILSLKKSGPELP+LLTQFSAGIAGTGLAV+L+V+CKLA GRVPFC SK+F+
Sbjct: 289 DKRHHRETAILSLKKSGPELPELLTQFSAGIAGTGLAVVLSVICKLACGRVPFCASKVFN 348

Query: 359 TGFGFGLVWLSWAV 372
           TG GFGLVWLSW V
Sbjct: 349 TGLGFGLVWLSWGV 362


>Medtr7g094470.1 | transmembrane protein, putative | HC |
           chr7:37605011-37600190 | 20130731
          Length = 417

 Score =  339 bits (869), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 195/374 (52%), Positives = 243/374 (64%), Gaps = 10/374 (2%)

Query: 1   MLQKLCLMTSHGCPPGLALQQELAMMGSIMKACQCQXXXXXXXXXXEILRYQSPSLRLN- 59
           M+Q+LC M SH  PPGL LQQ+   +         Q          ++L YQ P L+ + 
Sbjct: 1   MVQRLCPMASHIYPPGLVLQQQQLHLKDY------QTFLPSSLAKPDVLSYQCPFLKPSL 54

Query: 60  PYETRMMQDEWFSWNPFVNLDMSTLRPVFPVIQETFPRTVLFSLGVVKQFNEHDQFLQSI 119
             E+   Q++WF  N FVN++ S   PV    QE+    VL   G+V+Q  +HD+  + +
Sbjct: 55  SAESMETQNKWFDDNQFVNVNSSPQWPVSVDAQESCSNAVLLGFGIVEQCTKHDKISKHL 114

Query: 120 TSDTAEAGLGGAHIDLLSNLMDLQLSGIDERQQLFPS-LVYPNSKLYISKPLLDIFQSSA 178
            S TAE+    A+I L+ +LM LQLSGIDE QQ F S L+YPN K  I KPLL   Q SA
Sbjct: 115 KSGTAESRKDSANISLMLDLMKLQLSGIDEPQQPFSSSLLYPNDKFDIKKPLLYFLQDSA 174

Query: 179 FSSKITVHPDGQVTFMGTTIEMKNLLSLVAESYSSECTMHMGEKRSMVIPYFTRLKIKKV 238
           FSSKITV  DGQ+TFMGT I+MK+LLS+VAESY S+ ++H  EK SM++PYF+R+ I + 
Sbjct: 175 FSSKITVDLDGQITFMGTEIQMKDLLSVVAESYLSK-SLHKVEKHSMLVPYFSRVDINEA 233

Query: 239 EARSLSSTLDINSTLAVPLRSPXXXXXXXXXXXXXXXARERDLYKKNYVHACESLLFLMV 298
           E +S  ST+ + STL  PLRSP                RERDLYK NY HACESLL LMV
Sbjct: 234 EGQSRPSTVKMQSTLIAPLRSPKKVKFKPSQKKNKKIDRERDLYK-NYSHACESLLSLMV 292

Query: 299 DKRQNRKTAILSLKKSGPELPDLLTQFSAGIAGTGLAVLLTVVCKLATGRVPFCTSKLFS 358
           +K+++RKT I SLKKSGPEL + LTQ SAGIAGTGLAVLL+V+CK A GRV    S LF+
Sbjct: 293 NKKKSRKTMIPSLKKSGPELSEFLTQISAGIAGTGLAVLLSVICKQACGRVLLSASSLFN 352

Query: 359 TGFGFGLVWLSWAV 372
           TG GFGLVWLSWAV
Sbjct: 353 TGLGFGLVWLSWAV 366