Miyakogusa Predicted Gene
- Lj5g3v1696900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1696900.1 Non Characterized Hit- tr|F6TM98|F6TM98_HORSE
Uncharacterized protein OS=Equus caballus GN=MUL1
PE=4,29.19,1e-18,seg,NULL; RING/U-box,NULL; UNCHARACTERIZED RING ZINC
FINGER-CONTAINING PROTEIN,NULL; GIDE,E3 Ubiquit,CUFF.55729.1
(340 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g089900.1 | E3 ubiquitin ligase-like protein | HC | chr1:4... 545 e-155
Medtr1g089900.2 | E3 ubiquitin ligase-like protein | HC | chr1:4... 473 e-133
Medtr7g094290.1 | E3 ubiquitin ligase-like protein | LC | chr7:3... 302 3e-82
Medtr1g089940.1 | E3 ubiquitin ligase-like protein | LC | chr1:4... 242 3e-64
Medtr1g089910.1 | E3 ubiquitin ligase-like protein | LC | chr1:4... 231 1e-60
Medtr1g089910.2 | E3 ubiquitin ligase-like protein | LC | chr1:4... 229 2e-60
Medtr1g089960.1 | E3 ubiquitin ligase-like protein | LC | chr1:4... 221 9e-58
Medtr1g089920.1 | E3 ubiquitin ligase-like protein | HC | chr1:4... 207 2e-53
Medtr8g020850.1 | E3 ubiquitin ligase | HC | chr8:7360874-735521... 68 1e-11
Medtr4g056600.1 | RING/U-box protein | HC | chr4:20801849-207945... 57 3e-08
Medtr4g056600.3 | RING/U-box protein | HC | chr4:20802079-207946... 57 3e-08
Medtr4g056600.4 | RING/U-box protein | HC | chr4:20802079-207945... 57 3e-08
Medtr4g056600.2 | RING/U-box protein | HC | chr4:20801849-207946... 57 3e-08
Medtr1g037310.1 | zinc finger, C3HC4 type (RING finger) protein ... 54 2e-07
Medtr1g064680.1 | E3 ubiquitin-protein ligase | HC | chr1:284641... 53 5e-07
Medtr1g090803.1 | RING/U-box protein | HC | chr1:40822523-408290... 51 2e-06
Medtr1g090803.2 | RING/U-box protein | HC | chr1:40822523-408290... 51 2e-06
Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 2e-06
Medtr4g094795.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 3e-06
Medtr7g101150.1 | E3 ubiquitin-protein ligase, putative | HC | c... 50 4e-06
Medtr2g084475.4 | RING/U-box protein, putative | HC | chr2:35641... 49 5e-06
Medtr2g084475.2 | RING/U-box protein, putative | HC | chr2:35641... 49 5e-06
Medtr7g101150.2 | E3 ubiquitin-protein ligase, putative | HC | c... 49 5e-06
Medtr2g084475.3 | RING/U-box protein, putative | HC | chr2:35641... 49 5e-06
Medtr2g084475.5 | RING/U-box protein, putative | HC | chr2:35641... 49 5e-06
Medtr2g084475.1 | RING/U-box protein, putative | HC | chr2:35641... 49 5e-06
Medtr7g068580.1 | ubiquitin-protein ligase, putative | HC | chr7... 49 5e-06
Medtr1g018650.1 | ubiquitin-protein ligase, putative | HC | chr1... 49 6e-06
>Medtr1g089900.1 | E3 ubiquitin ligase-like protein | HC |
chr1:40259713-40254728 | 20130731
Length = 341
Score = 545 bits (1404), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/340 (76%), Positives = 289/340 (85%), Gaps = 1/340 (0%)
Query: 1 MIPWGGIXXXXXXXXXXXXGRSSGRDAELLKSVTRVNQLKELAQLLDADILPLVVSISGR 60
M+PW G+ GR+SGRD ++LKSV RVNQL+ELAQLLD +I PLVV+ISGR
Sbjct: 3 MVPWRGVGCCLSAAALYLLGRTSGRDVDILKSVNRVNQLRELAQLLDEEIFPLVVAISGR 62
Query: 61 VGSENPINCEFSSLRGAIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLEDGTDR 120
VGSE PI+CEFS LRG I+EETAEQHFLKH+DAGSWIQDSALM S S EVPWYL+DGT R
Sbjct: 63 VGSETPISCEFSGLRGVIIEETAEQHFLKHSDAGSWIQDSALMQSRSNEVPWYLDDGTGR 122
Query: 121 VHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVV 180
V VVGA+GATGFVLPVGSEAFEESGR VRGT DY+QGLKMLGVKRIERVLP+GTSLTVV
Sbjct: 123 VRVVGAQGATGFVLPVGSEAFEESGRLPVRGTSDYVQGLKMLGVKRIERVLPVGTSLTVV 182
Query: 181 GEAAKDDIGTVRIQRPYKGPFYVTPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKH 240
GEAAKDD+GT+RIQRP KGPFYV+PKTID+LIAN+G+WARWYKYAS GLTV Y+IA H
Sbjct: 183 GEAAKDDVGTIRIQRPSKGPFYVSPKTIDELIANIGRWARWYKYASAGLTVLSVYMIANH 242
Query: 241 AIRYILERQRRNEMQRRVLXXXXXKRLGHDNEGEKADGLVDSAKRERLIPDLCVICLEKE 300
A+RYILER+RRNE+++RVL K G DN GE D L D AKRER +P+LCVICLE+E
Sbjct: 243 AVRYILERRRRNELEKRVL-AAAAKISGQDNGGEMDDSLSDGAKRERAMPNLCVICLEQE 301
Query: 301 YNSVFVPCGHMCCCTGCSSHLTSCPLCRRQIEKVVKTFRH 340
YNSVFVPCGHMCCCT CSSHLTSCPLCRRQIEK VKTFRH
Sbjct: 302 YNSVFVPCGHMCCCTACSSHLTSCPLCRRQIEKAVKTFRH 341
>Medtr1g089900.2 | E3 ubiquitin ligase-like protein | HC |
chr1:40259713-40255724 | 20130731
Length = 308
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/307 (74%), Positives = 258/307 (84%), Gaps = 1/307 (0%)
Query: 1 MIPWGGIXXXXXXXXXXXXGRSSGRDAELLKSVTRVNQLKELAQLLDADILPLVVSISGR 60
M+PW G+ GR+SGRD ++LKSV RVNQL+ELAQLLD +I PLVV+ISGR
Sbjct: 3 MVPWRGVGCCLSAAALYLLGRTSGRDVDILKSVNRVNQLRELAQLLDEEIFPLVVAISGR 62
Query: 61 VGSENPINCEFSSLRGAIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLEDGTDR 120
VGSE PI+CEFS LRG I+EETAEQHFLKH+DAGSWIQDSALM S S EVPWYL+DGT R
Sbjct: 63 VGSETPISCEFSGLRGVIIEETAEQHFLKHSDAGSWIQDSALMQSRSNEVPWYLDDGTGR 122
Query: 121 VHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVV 180
V VVGA+GATGFVLPVGSEAFEESGR VRGT DY+QGLKMLGVKRIERVLP+GTSLTVV
Sbjct: 123 VRVVGAQGATGFVLPVGSEAFEESGRLPVRGTSDYVQGLKMLGVKRIERVLPVGTSLTVV 182
Query: 181 GEAAKDDIGTVRIQRPYKGPFYVTPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKH 240
GEAAKDD+GT+RIQRP KGPFYV+PKTID+LIAN+G+WARWYKYAS GLTV Y+IA H
Sbjct: 183 GEAAKDDVGTIRIQRPSKGPFYVSPKTIDELIANIGRWARWYKYASAGLTVLSVYMIANH 242
Query: 241 AIRYILERQRRNEMQRRVLXXXXXKRLGHDNEGEKADGLVDSAKRERLIPDLCVICLEKE 300
A+RYILER+RRNE+++RVL K G DN GE D L D AKRER +P+LCVICLE+E
Sbjct: 243 AVRYILERRRRNELEKRVL-AAAAKISGQDNGGEMDDSLSDGAKRERAMPNLCVICLEQE 301
Query: 301 YNSVFVP 307
YNSVFVP
Sbjct: 302 YNSVFVP 308
>Medtr7g094290.1 | E3 ubiquitin ligase-like protein | LC |
chr7:37531823-37528138 | 20130731
Length = 305
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/308 (54%), Positives = 207/308 (67%), Gaps = 4/308 (1%)
Query: 1 MIPWGGIXXXXXXXXXXXXGRSSGRDAELLKSVTRVNQLKELAQLLDADILPLVVSISGR 60
MIPW GI G + +DAE+LKSVTRVNQLKEL QLLD LVV+ISG+
Sbjct: 1 MIPWDGIGCYFSGIALYCLGITICKDAEILKSVTRVNQLKELEQLLDTQNSALVVAISGK 60
Query: 61 VGSENPINCEFSSLRGAIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLEDGTDR 120
V SE+ I CE S L+G IVEE EQHFLKH SWI+DSAL SKE+PWYLED TDR
Sbjct: 61 VASESTIECELSGLKGVIVEEAVEQHFLKHKHNDSWIKDSALTSFTSKEIPWYLEDSTDR 120
Query: 121 VHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVV 180
V VVGA+ A FVLPV E F+ S L+ L Y++GLK LG R ER LPIGT++TVV
Sbjct: 121 VDVVGAQSAKDFVLPVKHEVFKPSNPRLISKALHYIRGLKELGFNRTERTLPIGTTVTVV 180
Query: 181 GEAAKDDIGTVRIQRPYKGPFYVTPKTIDQL-IANLGKWARWYKYASMGLTVFGAYLIAK 239
GE KDD G +RIQ+P GPFYV+PKTIDQL IAN G RW+K+AS+GL + G+ LIA
Sbjct: 181 GEVTKDDAGAIRIQQPRTGPFYVSPKTIDQLIIANNGNLLRWFKHASIGLAIVGSCLIAN 240
Query: 240 HAIRYILERQRRNEMQRRVLXXXXXKRLGHDNEGEKADGLVDSAKRERLIPDLCVICLEK 299
I+YIL R R+ ++ +RVL K+ EGE D + + + +PDLCVICL++
Sbjct: 241 RTIQYILLRWRQCKLLKRVL-DAAAKKSKQGIEGEIDDNFLAGGQGD--LPDLCVICLDE 297
Query: 300 EYNSVFVP 307
+YN+ F+P
Sbjct: 298 KYNAAFLP 305
>Medtr1g089940.1 | E3 ubiquitin ligase-like protein | LC |
chr1:40285550-40283507 | 20130731
Length = 273
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 170/264 (64%), Gaps = 18/264 (6%)
Query: 5 GGIXXXXXXXXXXXXGRSSGRDAELLKSVTRVNQLKELAQLLDADILPLVVSISGRVGSE 64
GG+ R + R E L+S+ R N+LKEL QLLD + LPL+V+ISG V SE
Sbjct: 7 GGVSYCLAAAAVNFFNRDNVRHVETLESIPRFNELKELEQLLDVERLPLLVAISGNVVSE 66
Query: 65 NPINCEFSSLRGAIVEETAEQHFLKHN-------DAGS----------WIQDSALMLSMS 107
PI CE + LRG IVEE E+H+L+ + DA + W S+L+ S
Sbjct: 67 TPIKCEITGLRGVIVEEREERHYLQRDISIGQCKDAATQTQNGKIDIYWKNHSSLLSSNR 126
Query: 108 KEVPWYLEDGTDRVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRI 167
KEVPWYL+DGT RV VVGARG T FVLP G+ FE+ ++ + T D++Q +K+ G+KRI
Sbjct: 127 KEVPWYLDDGTGRVLVVGARGGTDFVLPAGTSTFEKLEQTQINETSDHIQLIKVKGLKRI 186
Query: 168 ERVLPIGTSLTVVGEAAKDDIGTVRIQRPYKGPFYVTPKTIDQLIANLGKWARWYKYASM 227
ERVLP+GT+LTVVG+A+KDD GT+RIQRP KGPFYV+ K ID+ A +AR +Y S
Sbjct: 187 ERVLPVGTALTVVGQASKDDDGTIRIQRPPKGPFYVSSKAIDEHAAKFVNYARSCEYTST 246
Query: 228 GLTVFGAYLIAKHAIRYILERQRR 251
GL V GA+ IA I Y+L R+RR
Sbjct: 247 GLIVLGAFQIAAR-IYYLLHRRRR 269
>Medtr1g089910.1 | E3 ubiquitin ligase-like protein | LC |
chr1:40267305-40262737 | 20130731
Length = 288
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 168/260 (64%), Gaps = 34/260 (13%)
Query: 5 GGIXXXXXXXXXXXXGRSSGRDAELLKSVTRVNQLKELAQLLDADILPLVVSISGRVGSE 64
GG+ + + R+AE+LKSVT+VN+L ++ QLLD + LVV+ISG V SE
Sbjct: 7 GGVVFCSAAAVLYTCSKYNHRNAEILKSVTQVNKLMDIEQLLDGERSHLVVAISGCVVSE 66
Query: 65 NPINCEFSSLRGAIVEETAEQHFLKH----------NDAGSWIQDSALMLSMSKEVPWYL 114
PI CE + LRG +VEET QH+L+ ND GSW+Q+S L L EVPWYL
Sbjct: 67 TPIKCELTGLRGVVVEETVVQHYLRECDANKLIMKCNDNGSWLQNSPLTLYTRNEVPWYL 126
Query: 115 EDGTDRVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKM------------L 162
+DGT RV L VGSE FE+SG + TL++LQG+K+ +
Sbjct: 127 DDGTGRV------------LVVGSETFEDSGWARACKTLNHLQGVKVGVSAPLSASVSVV 174
Query: 163 GVKRIERVLPIGTSLTVVGEAAKDDIGTVRIQRPYKGPFYVTPKTIDQLIANLGKWARWY 222
G+KRIE LP GTSLTVVGEA++D GTVRIQRP KGPFYV+ KTID+ IA+L +AR +
Sbjct: 175 GLKRIEWALPFGTSLTVVGEASRDGDGTVRIQRPPKGPFYVSRKTIDEQIADLTYFARRF 234
Query: 223 KYASMGLTVFGAYLIAKHAI 242
KYAS+GLT+FGA+LIA+ AI
Sbjct: 235 KYASVGLTLFGAWLIAEFAI 254
>Medtr1g089910.2 | E3 ubiquitin ligase-like protein | LC |
chr1:40267034-40262741 | 20130731
Length = 281
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/240 (53%), Positives = 163/240 (67%), Gaps = 34/240 (14%)
Query: 25 RDAELLKSVTRVNQLKELAQLLDADILPLVVSISGRVGSENPINCEFSSLRGAIVEETAE 84
R+AE+LKSVT+VN+L ++ QLLD + LVV+ISG V SE PI CE + LRG +VEET
Sbjct: 20 RNAEILKSVTQVNKLMDIEQLLDGERSHLVVAISGCVVSETPIKCELTGLRGVVVEETVV 79
Query: 85 QHFLKH----------NDAGSWIQDSALMLSMSKEVPWYLEDGTDRVHVVGARGATGFVL 134
QH+L+ ND GSW+Q+S L L EVPWYL+DGT RV L
Sbjct: 80 QHYLRECDANKLIMKCNDNGSWLQNSPLTLYTRNEVPWYLDDGTGRV------------L 127
Query: 135 PVGSEAFEESGRSLVRGTLDYLQGLKM------------LGVKRIERVLPIGTSLTVVGE 182
VGSE FE+SG + TL++LQG+K+ +G+KRIE LP GTSLTVVGE
Sbjct: 128 VVGSETFEDSGWARACKTLNHLQGVKVGVSAPLSASVSVVGLKRIEWALPFGTSLTVVGE 187
Query: 183 AAKDDIGTVRIQRPYKGPFYVTPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKHAI 242
A++D GTVRIQRP KGPFYV+ KTID+ IA+L +AR +KYAS+GLT+FGA+LIA+ AI
Sbjct: 188 ASRDGDGTVRIQRPPKGPFYVSRKTIDEQIADLTYFARRFKYASVGLTLFGAWLIAEFAI 247
>Medtr1g089960.1 | E3 ubiquitin ligase-like protein | LC |
chr1:40294389-40290678 | 20130731
Length = 442
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 156/255 (61%), Gaps = 35/255 (13%)
Query: 20 GRSSGRDAELLKSVTRVNQLKELAQLLDADILPLVVSISGRVGSENPINCEFSSLRGAIV 79
R+S +DAE+LKSVTRVNQLK+LAQLLDA+ LP+VVSISG V E PI C+ S L G IV
Sbjct: 140 ARTSDKDAEILKSVTRVNQLKDLAQLLDAEKLPMVVSISGEVAFETPIKCKISGLSGVIV 199
Query: 80 EETAEQHFLK--------------------------HNDAGSWIQDSALMLSMSKEVPWY 113
+E+ E+H+LK ND SW Q S L+ S+ KEVPWY
Sbjct: 200 DESVEEHYLKKVERKEKCECAIEHKKTCSYADSFFDKNDVFSWTQHSRLISSIPKEVPWY 259
Query: 114 LEDGTDRVHVVGARGATGFVLPVGSEAFEESGRSLVR------GTLDYLQGLKMLGVKRI 167
L+DGTDRVHVV + L R++ + D ++LG+KRI
Sbjct: 260 LDDGTDRVHVV---PLILYYLLKDQNLSRLKYRAISKMKSTDHAYFDMKSYFQILGLKRI 316
Query: 168 ERVLPIGTSLTVVGEAAKDDIGTVRIQRPYKGPFYVTPKTIDQLIANLGKWARWYKYASM 227
ERVL +GTSL VVGEA+KDD GTVRIQRP KGPFYV+ KTID+ IAN +AR+ K S+
Sbjct: 317 ERVLLVGTSLNVVGEASKDDDGTVRIQRPLKGPFYVSGKTIDENIANFVDYARYCKDNSV 376
Query: 228 GLTVFGAYLIAKHAI 242
LT+ GA L+A +
Sbjct: 377 ALTMIGACLLAASTV 391
>Medtr1g089920.1 | E3 ubiquitin ligase-like protein | HC |
chr1:40273125-40270841 | 20130731
Length = 290
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 149/250 (59%), Gaps = 31/250 (12%)
Query: 20 GRSSGRDAELLKSVTRVNQLKELAQLLDADILPLVVSISGRVGSENPINCEFSSLRGAIV 79
G+S R+AE+L+SV R +L++LA L+DA+ILP VV+ISGRV E PI E S L GAIV
Sbjct: 22 GKSPNRNAEILQSVPRC-KLEDLAHLMDANILPRVVTISGRVVCEAPITGELSGLGGAIV 80
Query: 80 EETAEQHFLKHN---------------------DAGSWIQDSALMLSMSKEVPWYLEDGT 118
EE E+H LK + +A SW L KE WYL+DGT
Sbjct: 81 EERVEEHHLKRDVEIKGKKESKGSVEPVTKKCGEADSWTPGYELKSVNHKEALWYLDDGT 140
Query: 119 DRVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLD---------YLQGLKMLGVKRIER 169
R VV A G TGF LPVGS FE S + D + Q +K+LG KRIER
Sbjct: 141 GRALVVRAWGGTGFELPVGSSTFENSTETRFHEKSDRIPFHEKSEHFQLIKILGFKRIER 200
Query: 170 VLPIGTSLTVVGEAAKDDIGTVRIQRPYKGPFYVTPKTIDQLIANLGKWARWYKYASMGL 229
VLP+GTSLTVVG+ +D G +RIQRP+ GPFYV+ +TID+ I NL ARW + S+GL
Sbjct: 201 VLPVGTSLTVVGQPVRDSAGAIRIQRPHNGPFYVSQQTIDEHIENLKSVARWCQCVSVGL 260
Query: 230 TVFGAYLIAK 239
TVFG LIA
Sbjct: 261 TVFGVSLIAN 270
>Medtr8g020850.1 | E3 ubiquitin ligase | HC | chr8:7360874-7355214 |
20130731
Length = 383
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 162 LGVKRIERVLPIGTSLTVVGEAAKDDIGTVRIQRPYKGPFYVTPKTIDQLIANLGKWARW 221
+G+ E++LP+G ++ VG + + G I+ P+Y++ + DQ+I +L +
Sbjct: 210 VGLLDEEKILPLGKDVSAVGLCSLRN-GIAEIKACNDLPYYLSDLSKDQMIVDLSFKTKL 268
Query: 222 YKYASMGLTVFGAYLIAKHAIRYILERQRRNEMQRRVLXXXXXKRLGHDNEGEKADGLVD 281
++ + L +I +R + ++ + ++ + E D
Sbjct: 269 LFWSGILLGSMSVGIIGYAVVRNWNKWKQWKQQRQLQQRRQQPIEPVPPTDDEIED---- 324
Query: 282 SAKRERLIPD--LCVICLEKEYNSVFVPCGHMCCCTGCSSHLTS-----CPLCRRQIEKV 334
+PD LCVICL + SVF+PCGH+ CC GC+ + S CP+CR+++
Sbjct: 325 -------VPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVESEVAPKCPVCRQEVRDS 377
Query: 335 VKTF 338
V+ F
Sbjct: 378 VRIF 381
>Medtr4g056600.1 | RING/U-box protein | HC | chr4:20801849-20794537
| 20130731
Length = 818
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 275 KADGLVDSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQ 330
+ D L D++K E + LC IC E +S+ CGH+C C+GC++ L +CP+C
Sbjct: 748 ECDSLDDNSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHAP 807
Query: 331 IEKVVKTF 338
+ +V++T+
Sbjct: 808 VLEVIRTY 815
>Medtr4g056600.3 | RING/U-box protein | HC | chr4:20802079-20794612
| 20130731
Length = 818
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 275 KADGLVDSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQ 330
+ D L D++K E + LC IC E +S+ CGH+C C+GC++ L +CP+C
Sbjct: 748 ECDSLDDNSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHAP 807
Query: 331 IEKVVKTF 338
+ +V++T+
Sbjct: 808 VLEVIRTY 815
>Medtr4g056600.4 | RING/U-box protein | HC | chr4:20802079-20794537
| 20130731
Length = 818
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 275 KADGLVDSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQ 330
+ D L D++K E + LC IC E +S+ CGH+C C+GC++ L +CP+C
Sbjct: 748 ECDSLDDNSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHAP 807
Query: 331 IEKVVKTF 338
+ +V++T+
Sbjct: 808 VLEVIRTY 815
>Medtr4g056600.2 | RING/U-box protein | HC | chr4:20801849-20794612
| 20130731
Length = 818
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 275 KADGLVDSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQ 330
+ D L D++K E + LC IC E +S+ CGH+C C+GC++ L +CP+C
Sbjct: 748 ECDSLDDNSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHAP 807
Query: 331 IEKVVKTF 338
+ +V++T+
Sbjct: 808 VLEVIRTY 815
>Medtr1g037310.1 | zinc finger, C3HC4 type (RING finger) protein | HC
| chr1:13760639-13736857 | 20130731
Length = 4760
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 293 CVICLEKEYNSVFVPCGHMCCCTGCSSHLTSCPLCRRQIEKVVKTFR 339
C +CL E + VPCGH+ C CSS ++ CP CR Q+ K ++ FR
Sbjct: 4714 CRVCLSSEVDITIVPCGHVLC-RKCSSAVSKCPFCRLQVTKAIRIFR 4759
>Medtr1g064680.1 | E3 ubiquitin-protein ligase | HC |
chr1:28464133-28468044 | 20130731
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 293 CVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 336
CVICL + N+ +PC HMC C+GC+ L CP+CR+ +E++++
Sbjct: 292 CVICLSEPRNTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLE 339
>Medtr1g090803.1 | RING/U-box protein | HC | chr1:40822523-40829027
| 20130731
Length = 851
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 293 CVICLEKEYNSVFVPCGHMCCCTGCSSHLT----SCPLCRRQIEKVVKTF 338
C +C + +S+ CGHMC C+ C+S L CPLCR I +VV+ +
Sbjct: 799 CCVCCDNHIDSLLYRCGHMCTCSKCASELIRGGGKCPLCRAPIVEVVRAY 848
>Medtr1g090803.2 | RING/U-box protein | HC | chr1:40822523-40829027
| 20130731
Length = 851
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 293 CVICLEKEYNSVFVPCGHMCCCTGCSSHLT----SCPLCRRQIEKVVKTF 338
C +C + +S+ CGHMC C+ C+S L CPLCR I +VV+ +
Sbjct: 799 CCVCCDNHIDSLLYRCGHMCTCSKCASELIRGGGKCPLCRAPIVEVVRAY 848
>Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:14865351-14860695 | 20130731
Length = 915
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 293 CVICLEKEYNSVFVPCGHMCCCTGCSSHLT----SCPLCRRQIEKVVKTF 338
C IC E + +SV CGHMC C C++ L CP+CR I+ VV+ +
Sbjct: 863 CCICNEMKVDSVLYRCGHMCACLKCANDLRWNNGKCPICRANIDDVVRVY 912
>Medtr4g094795.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:39016144-39012687 | 20130731
Length = 817
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 292 LCVICLEKEYNSVFVPCGHMCCCTGCSSHLT----SCPLCRRQIEKVVK 336
+C IC E + NSV CGHMC C C++ L CP+C+ I VVK
Sbjct: 764 MCCICNENKVNSVLYRCGHMCACLNCANELQWKSGKCPICQVAIIDVVK 812
>Medtr7g101150.1 | E3 ubiquitin-protein ligase, putative | HC |
chr7:40818341-40812981 | 20130731
Length = 352
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 293 CVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 336
CVICL + +++ PC HMC C+GC+ L CP+CR+ +E++++
Sbjct: 298 CVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLE 345
>Medtr2g084475.4 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 860
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 281 DSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 336
D +K E + LC IC E + + CGHMC C+ C++ L CP+CR + +V++
Sbjct: 797 DESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIR 856
Query: 337 TF 338
+
Sbjct: 857 AY 858
>Medtr2g084475.2 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 860
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 281 DSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 336
D +K E + LC IC E + + CGHMC C+ C++ L CP+CR + +V++
Sbjct: 797 DESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIR 856
Query: 337 TF 338
+
Sbjct: 857 AY 858
>Medtr7g101150.2 | E3 ubiquitin-protein ligase, putative | HC |
chr7:40818051-40813135 | 20130731
Length = 328
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 293 CVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 336
CVICL + +++ PC HMC C+GC+ L CP+CR+ +E++++
Sbjct: 274 CVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLE 321
>Medtr2g084475.3 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 835
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 281 DSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 336
D +K E + LC IC E + + CGHMC C+ C++ L CP+CR + +V++
Sbjct: 772 DESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIR 831
Query: 337 TF 338
+
Sbjct: 832 AY 833
>Medtr2g084475.5 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 835
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 281 DSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 336
D +K E + LC IC E + + CGHMC C+ C++ L CP+CR + +V++
Sbjct: 772 DESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIR 831
Query: 337 TF 338
+
Sbjct: 832 AY 833
>Medtr2g084475.1 | RING/U-box protein, putative | HC |
chr2:35641571-35646787 | 20130731
Length = 835
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 281 DSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCSSHL----TSCPLCRRQIEKVVK 336
D +K E + LC IC E + + CGHMC C+ C++ L CP+CR + +V++
Sbjct: 772 DESKWECVRKGLCCICCEGSIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVIR 831
Query: 337 TF 338
+
Sbjct: 832 AY 833
>Medtr7g068580.1 | ubiquitin-protein ligase, putative | HC |
chr7:25129211-25135611 | 20130731
Length = 447
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 292 LCVICLEKEYNSVFVPCGHMCCCTGCSSHLTS----CPLCRRQIEKVVKTF 338
LC IC + + F+PCGH C C S + CP+CRR ++KV + F
Sbjct: 395 LCAICFDAPRDCFFLPCGHCVACFACGSRIAEAAGICPVCRRNMKKVRRIF 445
>Medtr1g018650.1 | ubiquitin-protein ligase, putative | HC |
chr1:5422995-5420514 | 20130731
Length = 401
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 23/91 (25%)
Query: 266 RLGHDNEGEKADGLVDSAKRERLIPDLCVICLEKEYNSVFVPCGHMCCCTGCS------- 318
+ H+ E +D E LC+IC +++ N FVPCGH C C+
Sbjct: 316 NIFHEKEETNSD-----VSEELYDEKLCIICFDEQRNCFFVPCGHCATCYDCAQRIMDEE 370
Query: 319 --SHLTS---------CPLCRRQIEKVVKTF 338
S LT CP+CRR I KV + F
Sbjct: 371 SNSTLTDQIANPKSKVCPVCRRVINKVKRLF 401