Miyakogusa Predicted Gene

Lj5g3v1696800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1696800.1 Non Characterized Hit- tr|I0YUY1|I0YUY1_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,31.21,2e-16,SUBFAMILY NOT NAMED,NULL; SYNAPSE-ASSOCIATED
PROTEIN,NULL; coiled-coil,NULL; BSD domain-like,NULL; B,CUFF.55720.1
         (481 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g089850.1 | synapse-associated protein, putative | HC | ch...   366   e-101
Medtr7g094240.2 | synapse-associated protein, putative | HC | ch...   238   1e-62
Medtr7g094240.1 | synapse-associated protein, putative | HC | ch...   238   1e-62
Medtr2g021070.1 | synapse-associated protein, putative | HC | ch...   196   5e-50

>Medtr1g089850.1 | synapse-associated protein, putative | HC |
           chr1:40216982-40218744 | 20130731
          Length = 459

 Score =  366 bits (939), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 247/474 (52%), Positives = 283/474 (59%), Gaps = 47/474 (9%)

Query: 1   MNFFNSVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTWNFGGLIKTLTAKSESII 60
           MNFF SVF                                 TWNFGGL+KTL +KSESII
Sbjct: 1   MNFFKSVFSDDPDPPQPESEPKPNNVDQDPNSGAGDGD---TWNFGGLMKTLASKSESII 57

Query: 61  ETYRRDLQEFSTGLKTEIEVAQGSVGHVIDEFGNTVIKGTAQIISHGKDAILAVNLXXXX 120
           ETYRRDLQEFSTGLK EIEVAQ SVG    E G TVIKGTAQIIS GK+AILAVNL    
Sbjct: 58  ETYRRDLQEFSTGLKNEIEVAQDSVG----EIGTTVIKGTAQIISQGKEAILAVNLDSDS 113

Query: 121 XXXXXXXHRKQXXXXXXXXXXXXXXYSRFDAQVRAIQGDVNTYSEAPEDLGEFEKWKSGF 180
                  +R                YSRFDAQVRAIQGDV TY+E PEDL EF++WK GF
Sbjct: 114 DNSTATANR-------DSNRLDSKRYSRFDAQVRAIQGDVGTYTEMPEDLSEFDEWKLGF 166

Query: 181 SLDGKGDEIEGLFRENEAMESVYKRVVPNVVDHESFWFRYYYKVYRLKKAEDVRARLVRR 240
            LD K DE+E L REN+AMESVYKRVVPNVVDHESFWFRYYYKVYRLKKAEDVRARLVRR
Sbjct: 167 VLDEKSDEMEKLSRENDAMESVYKRVVPNVVDHESFWFRYYYKVYRLKKAEDVRARLVRR 226

Query: 241 MSRXXXXXXXXXXXDVDDGDEKAYEGGGK--------PEVGGESVEKKVDTQLQIGGSGS 292
           +SR           D DD +E+  EG  K         E+GGE + +KVDT L+IG SGS
Sbjct: 227 ISREEEDLSWDVEDDDDDVEEEENEGEVKVKSEIVINKEIGGEQLVEKVDTDLKIGASGS 286

Query: 293 ANNEGEAKRMSAEEVQHSGEEETKVEGKDSFLQSKEVGKEMEKSVRELRDEKSEAGNEMG 352
                + K  S EE QH  EEE KVE KD+ +QS E+G E +KSV E R           
Sbjct: 287 G--ASDEKNSSVEEGQHLREEELKVEKKDNVMQSNELGDEKDKSVEESR----------- 333

Query: 353 GGCKVATEEAGVDKASKSLVGGDGASKSDSAAESDGKVVKEMEGGDGKSTRKNNESSVVE 412
              +   ++ GV+KASKS+V  D A+K  S  ESD KV++  +G +  S++  NESSVVE
Sbjct: 334 -VFENKDDDGGVNKASKSVV-DDAANKEVSVGESDEKVIERKDGDEKPSSK--NESSVVE 389

Query: 413 SQKSANVXXXXXXXXXXXXXXXXLSSVDEKK----VSQSGSTSQVDLRKRLSTA 462
           S+   N                 LS +DEKK     SQS STS+VDL KRLSTA
Sbjct: 390 SKHMEN----EEEEDLGWDDIEDLSGIDEKKETQSQSQSDSTSKVDLLKRLSTA 439


>Medtr7g094240.2 | synapse-associated protein, putative | HC |
           chr7:37505052-37506769 | 20130731
          Length = 401

 Score =  238 bits (607), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 188/443 (42%), Positives = 234/443 (52%), Gaps = 86/443 (19%)

Query: 44  NFGGLIKTLTAKSESIIETYRRDLQEFSTGLKTEIEVAQGS---VGHVIDEFGNTVIKGT 100
           N G LIKT+  KSES+IE YRRDL EF TGL+ EIEVA  S   VGHVID+FGNTVIKGT
Sbjct: 40  NIGNLIKTVGEKSESVIEIYRRDLHEFGTGLQKEIEVAHDSLETVGHVIDQFGNTVIKGT 99

Query: 101 AQIISHGKDAILAVNLXXXXXXXXXXXHRKQXXXXXXXXXXXXXXYSRFDAQVRAIQGDV 160
           AQIIS  KDAIL                 K+              YSRFDAQ+ AIQGD 
Sbjct: 100 AQIISQSKDAILE-----------SESESKKKKRVKKQSSLNSKLYSRFDAQIHAIQGDS 148

Query: 161 NTYSEAPEDLGEFEKWKSGFSLDGKGDEIEGLFRENEAMESVYKRVVPNVVDHESFWFRY 220
           +TY+E P DL  + KWK  FSL+GK DE+E L REN  MESVY+R+VPNVVD E+FW RY
Sbjct: 149 DTYTEEPFDLERYNKWKLEFSLEGKKDEMEKLLRENVEMESVYRRLVPNVVDRETFWLRY 208

Query: 221 YYKVYRLKKAEDVRARLVRRMSRXXXXXXXXXXXDVDDGDEKAYEGGGKPEVGGESVEKK 280
           YYKVY++KKAEDVRA+LV+RMSR             ++ +E +++   +     +  +K+
Sbjct: 209 YYKVYKVKKAEDVRAKLVKRMSR-------------EEDEELSWDVEDEEYEDDDFDDKR 255

Query: 281 VDTQLQIGGSGSANNEGEAKRMSAEEVQHSGEEETKVEGKDSFLQSKEVGKEMEKSVREL 340
           +            NN         EEV     EE+KVE +DS LQ+    K ME+S    
Sbjct: 256 L------------NN--------VEEVDDFQGEESKVEKRDSLLQN----KMMEESK--- 288

Query: 341 RDEKSEAGNEMGGGCKVATEEAGVDKASKSLVGGDGASKSDSAAESDGKVVKEMEGGDGK 400
            DE  E   E G       + + VDK              DSAA +D KV  E   GDGK
Sbjct: 289 VDENLEVVQEKG-------DRSQVDKV------------KDSAAVADKKVTMEKNAGDGK 329

Query: 401 STRKNNESSVVESQKSANVXXXXXXXXXXXXXXXXLSSVDEKKVS--QSGSTSQVDLRKR 458
           +++  +E+S  E +K                    L S +EKK     SGS S++DLRKR
Sbjct: 330 TSQVVSENSKQEGEKEL-----------EWDEIEDLGSNEEKKAMGLGSGSPSKIDLRKR 378

Query: 459 LSTAXXXXXXXXXXXXXXXPAKA 481
           LS+A               PAKA
Sbjct: 379 LSSAAEEEDLSWDIEDDDEPAKA 401


>Medtr7g094240.1 | synapse-associated protein, putative | HC |
           chr7:37505038-37506614 | 20130731
          Length = 401

 Score =  238 bits (607), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 188/443 (42%), Positives = 234/443 (52%), Gaps = 86/443 (19%)

Query: 44  NFGGLIKTLTAKSESIIETYRRDLQEFSTGLKTEIEVAQGS---VGHVIDEFGNTVIKGT 100
           N G LIKT+  KSES+IE YRRDL EF TGL+ EIEVA  S   VGHVID+FGNTVIKGT
Sbjct: 40  NIGNLIKTVGEKSESVIEIYRRDLHEFGTGLQKEIEVAHDSLETVGHVIDQFGNTVIKGT 99

Query: 101 AQIISHGKDAILAVNLXXXXXXXXXXXHRKQXXXXXXXXXXXXXXYSRFDAQVRAIQGDV 160
           AQIIS  KDAIL                 K+              YSRFDAQ+ AIQGD 
Sbjct: 100 AQIISQSKDAILE-----------SESESKKKKRVKKQSSLNSKLYSRFDAQIHAIQGDS 148

Query: 161 NTYSEAPEDLGEFEKWKSGFSLDGKGDEIEGLFRENEAMESVYKRVVPNVVDHESFWFRY 220
           +TY+E P DL  + KWK  FSL+GK DE+E L REN  MESVY+R+VPNVVD E+FW RY
Sbjct: 149 DTYTEEPFDLERYNKWKLEFSLEGKKDEMEKLLRENVEMESVYRRLVPNVVDRETFWLRY 208

Query: 221 YYKVYRLKKAEDVRARLVRRMSRXXXXXXXXXXXDVDDGDEKAYEGGGKPEVGGESVEKK 280
           YYKVY++KKAEDVRA+LV+RMSR             ++ +E +++   +     +  +K+
Sbjct: 209 YYKVYKVKKAEDVRAKLVKRMSR-------------EEDEELSWDVEDEEYEDDDFDDKR 255

Query: 281 VDTQLQIGGSGSANNEGEAKRMSAEEVQHSGEEETKVEGKDSFLQSKEVGKEMEKSVREL 340
           +            NN         EEV     EE+KVE +DS LQ+    K ME+S    
Sbjct: 256 L------------NN--------VEEVDDFQGEESKVEKRDSLLQN----KMMEESK--- 288

Query: 341 RDEKSEAGNEMGGGCKVATEEAGVDKASKSLVGGDGASKSDSAAESDGKVVKEMEGGDGK 400
            DE  E   E G       + + VDK              DSAA +D KV  E   GDGK
Sbjct: 289 VDENLEVVQEKG-------DRSQVDKV------------KDSAAVADKKVTMEKNAGDGK 329

Query: 401 STRKNNESSVVESQKSANVXXXXXXXXXXXXXXXXLSSVDEKKVS--QSGSTSQVDLRKR 458
           +++  +E+S  E +K                    L S +EKK     SGS S++DLRKR
Sbjct: 330 TSQVVSENSKQEGEKEL-----------EWDEIEDLGSNEEKKAMGLGSGSPSKIDLRKR 378

Query: 459 LSTAXXXXXXXXXXXXXXXPAKA 481
           LS+A               PAKA
Sbjct: 379 LSSAAEEEDLSWDIEDDDEPAKA 401


>Medtr2g021070.1 | synapse-associated protein, putative | HC |
           chr2:7122105-7123871 | 20130731
          Length = 457

 Score =  196 bits (497), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 106/265 (40%), Positives = 141/265 (53%), Gaps = 33/265 (12%)

Query: 1   MNFFNSVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTWNFGGLIKTLTAKSESII 60
           MNFF +VF                                  W+FGGLI+TL +KSES++
Sbjct: 1   MNFFKTVFSDEPESPPSHNSDSDQPDPDHHDTPTETT----AWSFGGLIQTLASKSESVL 56

Query: 61  ETYRRDLQEFSTGLKTEIEV----------------------AQGS---VGHVIDEFGNT 95
           E YRRDL+EFS+GLK E  V                      AQ S   VG  ID+ G+T
Sbjct: 57  ENYRRDLEEFSSGLKIETSVIREAASRAVKDLPASLDVGASVAQESLETVGQAIDDIGST 116

Query: 96  VIKGTAQIISHGKDAILAVNLXXXXXXXXXXXHRKQXXXXXXXXXXXXXXYSRFDAQVRA 155
           V K TAQIISHG++++LA              +  +              YSRFD  VRA
Sbjct: 117 VWKSTAQIISHGRESLLA----PDSDSDSNDSNNIKRDLSSSSSVGDLKRYSRFDVLVRA 172

Query: 156 IQGDVNTYSEAPEDLGEFEKWKSGFSLDGKGDEIEGLFRENEAMESVYKRVVPNVVDHES 215
           +Q DVNTY + PEDL  F +WK GF LD K DEIE L +EN+ ++ +Y ++VP+ +D E 
Sbjct: 173 LQSDVNTYLDEPEDLVNFNEWKLGFVLDDKVDEIENLIKENDVVDEIYVKIVPSKIDDEI 232

Query: 216 FWFRYYYKVYRLKKAEDVRARLVRR 240
           FW RY+YK+++LK+AED RA+ V+R
Sbjct: 233 FWSRYFYKLHKLKQAEDARAKFVKR 257