Miyakogusa Predicted Gene

Lj5g3v1681450.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1681450.1 tr|Q7XRU6|Q7XRU6_ORYSJ OSJNBa0055C08.12 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0055C08.12
,45.61,3e-18,GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE
1,NULL,CUFF.55698.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0004s0240.1 | hypothetical protein | HC | scaffold0004:1020...   432   e-121

>Medtr0004s0240.1 | hypothetical protein | HC |
           scaffold0004:102002-96075 | 20130731
          Length = 354

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/253 (86%), Positives = 229/253 (90%), Gaps = 17/253 (6%)

Query: 1   MVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSD 60
           M+RPGN MELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSD
Sbjct: 106 MIRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSD 165

Query: 61  TTGQVLSRSQQWDNNIAAKIAEFTATFEKQALAFNIISQKRNLGEFRSEERLMIEQALLQ 120
           TTGQ+LSRSQQWDNNIAAKIAEFTATFEKQALAFNIISQKR+LGEFRSEERLMIEQALLQ
Sbjct: 166 TTGQMLSRSQQWDNNIAAKIAEFTATFEKQALAFNIISQKRSLGEFRSEERLMIEQALLQ 225

Query: 121 EEKRALM-----------AGREAHEAKLRMAAMYQAE-QARAESHSHAEMMSRAPIRGSA 168
           EEKRAL+           AGREAHEAKLRMAAMYQAE QARA+S SHAEMMSRAPIRGSA
Sbjct: 226 EEKRALIELRAELESREKAGREAHEAKLRMAAMYQAEQQARADSQSHAEMMSRAPIRGSA 285

Query: 169 LGSQGSG-DMMGHDMGEQDQGGHPGDMMNGWGNNAHREEKEPSEDFLNDEAENGDTGTQD 227
           LGSQGS   ++GHDMG+QD     G+MMNGWGNNA R+EKEPSEDFLNDEAENGDTGT D
Sbjct: 286 LGSQGSDIGIVGHDMGDQDH----GEMMNGWGNNAQRDEKEPSEDFLNDEAENGDTGTPD 341

Query: 228 GWREVGEFDLNAR 240
           GWREVGEFDLNAR
Sbjct: 342 GWREVGEFDLNAR 354