Miyakogusa Predicted Gene
- Lj5g3v1681450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1681450.1 tr|Q7XRU6|Q7XRU6_ORYSJ OSJNBa0055C08.12 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0055C08.12
,45.61,3e-18,GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE
1,NULL,CUFF.55698.1
(240 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0004s0240.1 | hypothetical protein | HC | scaffold0004:1020... 432 e-121
>Medtr0004s0240.1 | hypothetical protein | HC |
scaffold0004:102002-96075 | 20130731
Length = 354
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/253 (86%), Positives = 229/253 (90%), Gaps = 17/253 (6%)
Query: 1 MVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSD 60
M+RPGN MELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSD
Sbjct: 106 MIRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSD 165
Query: 61 TTGQVLSRSQQWDNNIAAKIAEFTATFEKQALAFNIISQKRNLGEFRSEERLMIEQALLQ 120
TTGQ+LSRSQQWDNNIAAKIAEFTATFEKQALAFNIISQKR+LGEFRSEERLMIEQALLQ
Sbjct: 166 TTGQMLSRSQQWDNNIAAKIAEFTATFEKQALAFNIISQKRSLGEFRSEERLMIEQALLQ 225
Query: 121 EEKRALM-----------AGREAHEAKLRMAAMYQAE-QARAESHSHAEMMSRAPIRGSA 168
EEKRAL+ AGREAHEAKLRMAAMYQAE QARA+S SHAEMMSRAPIRGSA
Sbjct: 226 EEKRALIELRAELESREKAGREAHEAKLRMAAMYQAEQQARADSQSHAEMMSRAPIRGSA 285
Query: 169 LGSQGSG-DMMGHDMGEQDQGGHPGDMMNGWGNNAHREEKEPSEDFLNDEAENGDTGTQD 227
LGSQGS ++GHDMG+QD G+MMNGWGNNA R+EKEPSEDFLNDEAENGDTGT D
Sbjct: 286 LGSQGSDIGIVGHDMGDQDH----GEMMNGWGNNAQRDEKEPSEDFLNDEAENGDTGTPD 341
Query: 228 GWREVGEFDLNAR 240
GWREVGEFDLNAR
Sbjct: 342 GWREVGEFDLNAR 354