Miyakogusa Predicted Gene

Lj5g3v1667300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1667300.1 Non Characterized Hit- tr|I3S5R3|I3S5R3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.97,0,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL;
Hypothetical protein YjiA, C-te,CUFF.55697.1
         (390 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g044050.1 | cobalamin biosynthesis protein | HC | chr5:193...   638   0.0  
Medtr8g071110.1 | prli-interacting factor L-like protein | HC | ...   231   9e-61
Medtr1g115505.1 | cobalamin biosynthesis protein | HC | chr1:521...   177   2e-44
Medtr5g021440.1 | cobalamin biosynthesis CobW-like protein, puta...    67   4e-11

>Medtr5g044050.1 | cobalamin biosynthesis protein | HC |
           chr5:19367945-19374070 | 20130731
          Length = 366

 Score =  638 bits (1646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/366 (85%), Positives = 333/366 (90%), Gaps = 2/366 (0%)

Query: 27  MEHDEDEEAPLAVQIQ--GLDESVSQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIA 84
           MEHDEDEE PLAV+IQ    DES+SQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIA
Sbjct: 1   MEHDEDEEPPLAVEIQQHNNDESISQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIA 60

Query: 85  VILNEFGEEIGVERAMINEGDGGAMVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 144
           VILNEFGEEIGVERA+INEG+ GA+VEEWVELANGCICCTVKHSLVQALEQLVQRKERLD
Sbjct: 61  VILNEFGEEIGVERALINEGESGAVVEEWVELANGCICCTVKHSLVQALEQLVQRKERLD 120

Query: 145 HILLETTGLANPAPLASVLWLDEQLESDVKLDSIVTVVDAKNVRLQIDQHRRSSSYPEAY 204
           HILLETTGLANPAPLAS+LWLDEQLESDVKLDSIVTVVDAKNVR Q+ +HR SSS+PEAY
Sbjct: 121 HILLETTGLANPAPLASILWLDEQLESDVKLDSIVTVVDAKNVRFQLKEHRGSSSFPEAY 180

Query: 205 FQIAFADIIILNKVDLVSAEGSGALKELEEEIHNINSLVEIIHSVKCQVDLSKILNRHAY 264
           FQIAFADI+ILNKVDLVSAEGSGAL+ELEEEIHNIN+LVEIIHSV+CQVDLSKILNRHAY
Sbjct: 181 FQIAFADIVILNKVDLVSAEGSGALEELEEEIHNINTLVEIIHSVRCQVDLSKILNRHAY 240

Query: 265 DTARAPHXXXXXXXXXXXXXXXXHDSGVRTICISEQKTIDIDKTRIWLEEILWEKKYDMD 324
           DTA A H                HDSGVRTICI E  TID+DKTRIWLEEILWEKKYDMD
Sbjct: 241 DTAHAAHLEALLEESRSLSTKKLHDSGVRTICICETGTIDLDKTRIWLEEILWEKKYDMD 300

Query: 325 VYRCKGVLSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDVLIHSF 384
           VYRCKGVL+VQNSD+LHTLQAVRELYEIVPARKW++EENRMNKIVFIGHNLKEDVLI+S 
Sbjct: 301 VYRCKGVLNVQNSDELHTLQAVRELYEIVPARKWKKEENRMNKIVFIGHNLKEDVLINSL 360

Query: 385 RACVTC 390
           +A  TC
Sbjct: 361 KALATC 366


>Medtr8g071110.1 | prli-interacting factor L-like protein | HC |
           chr8:30172455-30180031 | 20130731
          Length = 407

 Score =  231 bits (589), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 137/357 (38%), Positives = 204/357 (57%), Gaps = 21/357 (5%)

Query: 46  ESVSQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERAMINEGD 105
           E  S  + +  T+ITG+LG+GK+TL+NHIL SQHGKRIAVI NEFGE + ++ +++    
Sbjct: 57  EEASVDNRIPATIITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGE-VDIDGSLV-ASH 114

Query: 106 GGAMVEEWVELANGCICCTVKHSLVQALEQLVQRK-ERLDHILLETTGLANPAPLASVLW 164
                E+ + + NGC+CCTV+  LV+ L +LV++K ++ DHI++ETTGLA PAP+    +
Sbjct: 115 SSVNGEDIIMVNNGCLCCTVRGDLVKMLLELVRKKRDKFDHIVIETTGLAKPAPVIETFF 174

Query: 165 LDEQLESDVKLDSIVTVVDAKNVRLQIDQHRRSSSYPEAYFQIAFADIIILNKVDLVSAE 224
            DE +   VKLD +VT+VD K+    +++ +      EA  Q+A+AD IILNK+DLV+  
Sbjct: 175 SDELVSEYVKLDGVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVT-- 232

Query: 225 GSGALKELEEEIHNINSLVEIIHSVKCQVDLSKILNRHAYDTAR------------APHX 272
               L  L ++I +IN + +I  +    VD+  +L    YD  R            A H 
Sbjct: 233 -ESELNMLTKKIKHINGMAQIKQAKFGSVDIDFVLGVGGYDIQRIEAEVEGECPSTASHP 291

Query: 273 XX-XXXXXXXXXXXXXHDSGVRTICISEQKTIDIDKTRIWLEEILWEKKYDMDVYRCKGV 331
                           HDS V ++ I  + T+D D+   WLE ++ EK  D+  YR KGV
Sbjct: 292 DDCGHEHKGHHHHDHVHDSAVSSVSIVAEGTLDRDEVEDWLERLVEEKGEDL--YRMKGV 349

Query: 332 LSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDVLIHSFRACV 388
           L+V  S+Q +  Q V  + +  P + W+  E R+NK+VFIG NL E  L   F+ C+
Sbjct: 350 LAVDGSEQRYVFQGVHSMLDDSPGKTWQPNEKRINKLVFIGRNLDETALRKGFKGCL 406


>Medtr1g115505.1 | cobalamin biosynthesis protein | HC |
           chr1:52194306-52199057 | 20130731
          Length = 449

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/222 (42%), Positives = 144/222 (64%), Gaps = 7/222 (3%)

Query: 48  VSQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERAMINEGDGG 107
           +   + +  T+ITG+LG+GK+TL+NHIL ++HGKRIAVI NEFGE I ++ +++     G
Sbjct: 83  IPPDNRIPATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEFGE-IDIDGSLVAAKTAG 141

Query: 108 AMVEEWVELANGCICCTVKHSLVQALEQLV-QRKERLDHILLETTGLANPAPLASVLWLD 166
           A  E+ + L NGC+CCTV+  LV+ + +LV  +K + DHI++ETTGLANPAP+    + +
Sbjct: 142 A--EDIMLLNNGCLCCTVRGDLVRMISELVTSKKGKFDHIVIETTGLANPAPIIQTFYAE 199

Query: 167 EQLESDVKLDSIVTVVDAKNVRLQIDQHRRSSSYPEAYFQIAFADIIILNKVDLVSAEGS 226
           + + ++VKLD +VT+VDAK+  L +D+ +      EA  QIA+AD II+NK DLV   G 
Sbjct: 200 DTIFNEVKLDGVVTLVDAKHAGLHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLV---GE 256

Query: 227 GALKELEEEIHNINSLVEIIHSVKCQVDLSKILNRHAYDTAR 268
             +  L + I  INSL  +  +   +V+L  +L    +D  R
Sbjct: 257 SDITSLVQRIRKINSLANLKRTEYGKVNLDYVLGIGGFDLER 298



 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 290 SGVRTICISEQKTIDIDKTRIWLEEILWEKKYDMDVYRCKGVLSVQNSDQLHTLQAVREL 349
            GV ++ I  +  +D++K  +WL  +L E+  D  +YR KG+LSVQ  ++    Q V ++
Sbjct: 352 PGVSSVSIVCEGNLDLEKANMWLGTLLMERSDD--IYRMKGLLSVQGMNERFVFQGVHDI 409

Query: 350 YEIVPARKWEREENRMNKIVFIGHNLKEDVLIHSFRACV 388
           ++  P R W+ +E R NKIVFIG NL  + L   F+ C+
Sbjct: 410 FQGSPERLWQPDEPRTNKIVFIGKNLNAEELEKGFKTCL 448


>Medtr5g021440.1 | cobalamin biosynthesis CobW-like protein,
          putative | HC | chr5:8284612-8284415 | 20130731
          Length = 65

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 3/48 (6%)

Query: 27 MEHDEDEEAPLAVQIQ--GLDESVSQQSSVGVTLITGYLGAGKSTLVN 72
          MEHDE EE PLAV+IQ    DES+SQQSSVGVTLI GYLGAGKST+ +
Sbjct: 1  MEHDE-EEPPLAVEIQQHNNDESISQQSSVGVTLIIGYLGAGKSTITH 47