Miyakogusa Predicted Gene

Lj5g3v1627910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1627910.1 Non Characterized Hit- tr|I1L7V2|I1L7V2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17926
PE,77.9,0,seg,NULL; Epimerase,NAD-dependent epimerase/dehydratase; no
description,NAD(P)-binding domain; DTDP-,CUFF.55672.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g088480.1 | UDP-glucuronic acid decarboxylase-like protein...   233   1e-61
Medtr1g067530.1 | UDP-glucuronic acid decarboxylase | HC | chr1:...   149   2e-36
Medtr4g120030.1 | UDP-glucuronic acid decarboxylase-like protein...   117   9e-27
Medtr4g063600.4 | UDP-glucuronic acid decarboxylase | HC | chr4:...    90   1e-18
Medtr4g063600.3 | UDP-glucuronic acid decarboxylase | HC | chr4:...    90   1e-18
Medtr4g063600.1 | UDP-glucuronic acid decarboxylase | HC | chr4:...    90   1e-18
Medtr4g063600.2 | UDP-glucuronic acid decarboxylase | HC | chr4:...    90   1e-18
Medtr2g096660.2 | UDP-glucuronic acid decarboxylase | HC | chr2:...    89   3e-18
Medtr2g096660.1 | UDP-glucuronic acid decarboxylase | HC | chr2:...    89   3e-18
Medtr2g096660.3 | UDP-glucuronic acid decarboxylase | HC | chr2:...    89   3e-18
Medtr0354s0040.1 | UDP-D-glucuronate 4-epimerase | HC | scaffold...    49   2e-06

>Medtr1g088480.1 | UDP-glucuronic acid decarboxylase-like protein |
           HC | chr1:39567913-39563885 | 20130731
          Length = 430

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 126/182 (69%), Positives = 135/182 (74%), Gaps = 7/182 (3%)

Query: 1   MGSELNYRRHDETRPVNDAYSPKPDKPWLSVTRPIRYMLREQRLLFVLAGVAIAXXXXXX 60
           M SEL +R H ET+ VND YSPKP+KPWLSV RPIRYMLREQRL+FVL G+ IA      
Sbjct: 1   MSSELTFRGH-ETQQVNDEYSPKPNKPWLSVIRPIRYMLREQRLVFVLIGIVIASVFFTI 59

Query: 61  XXXXXXXXXXXXXXXLNEPVPISYFNHEYKQ-PAFHHR-----IHSVGKIPLGIKRKGLR 114
                            E   ISYF+ E K  PA + +     +HS GKIPLGIKRKGLR
Sbjct: 60  IPSSSTSSSSSFSTRPYESDSISYFDRESKTTPAVYKQRAASVVHSSGKIPLGIKRKGLR 119

Query: 115 IVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL 174
           IVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL
Sbjct: 120 IVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL 179

Query: 175 LE 176
           LE
Sbjct: 180 LE 181


>Medtr1g067530.1 | UDP-glucuronic acid decarboxylase | HC |
           chr1:29126603-29132924 | 20130731
          Length = 460

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/174 (48%), Positives = 106/174 (60%), Gaps = 6/174 (3%)

Query: 3   SELNYRRHDETRPVNDAYSPKPDKPWLSVTRPIRYMLREQRLLFVLAGVAIAXXXXXXXX 62
             LN+RR +E       YSPK  K   ++ R I Y+LREQRLLF+L G+ I         
Sbjct: 8   QSLNHRREEEMGSETPPYSPKSMKHTRTLPRSINYLLREQRLLFILVGILIGSTFFIIQP 67

Query: 63  XXXXXXXXXXXXXLNEPVPISYFNHEYKQPAFHHRIHSVGKIPLGIKRKGLRIVVTGGAG 122
                        L     +  FN   +  +       VG+IP GI  + LR+VVTGGAG
Sbjct: 68  TLSRISPPEAGLFLPRS-GLVRFNTGNEGASLR-----VGRIPAGIGGRRLRVVVTGGAG 121

Query: 123 FVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 176
           FVGSHLVD+L+ RG+ VIV+DNFFTGRKEN++H FGNPRFELIRHDVV+P+LLE
Sbjct: 122 FVGSHLVDKLIGRGNDVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVDPILLE 175


>Medtr4g120030.1 | UDP-glucuronic acid decarboxylase-like protein |
           HC | chr4:49755377-49758094 | 20130731
          Length = 423

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 69/85 (81%), Gaps = 3/85 (3%)

Query: 95  HHRIHSVGKIPLGI---KRKGLRIVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE 151
           H R     ++PL +    ++  R++VTGGAGFVGSHLVDRL+ RGD+VIV+DN+FTGRKE
Sbjct: 90  HGRDERKRRVPLAVGLKSKRQKRVLVTGGAGFVGSHLVDRLIERGDNVIVIDNYFTGRKE 149

Query: 152 NVMHHFGNPRFELIRHDVVEPLLLE 176
           NV+HH GNP FELIRHDVVEP+LLE
Sbjct: 150 NVVHHIGNPNFELIRHDVVEPILLE 174


>Medtr4g063600.4 | UDP-glucuronic acid decarboxylase | HC |
           chr4:23491388-23486964 | 20130731
          Length = 345

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 110 RKGLRIVVTGGAGFVGSHLVDRLMA-RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 168
           +  +RI+VTGGAGF+GSHLVDRLM    + VIV DNFFTG K+N+    G+PRFELIRHD
Sbjct: 29  QSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHD 88

Query: 169 VVEPLLLE 176
           V E L++E
Sbjct: 89  VTETLMIE 96


>Medtr4g063600.3 | UDP-glucuronic acid decarboxylase | HC |
           chr4:23491560-23486964 | 20130731
          Length = 345

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 110 RKGLRIVVTGGAGFVGSHLVDRLMA-RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 168
           +  +RI+VTGGAGF+GSHLVDRLM    + VIV DNFFTG K+N+    G+PRFELIRHD
Sbjct: 29  QSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHD 88

Query: 169 VVEPLLLE 176
           V E L++E
Sbjct: 89  VTETLMIE 96


>Medtr4g063600.1 | UDP-glucuronic acid decarboxylase | HC |
           chr4:23491560-23486964 | 20130731
          Length = 345

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 110 RKGLRIVVTGGAGFVGSHLVDRLMA-RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 168
           +  +RI+VTGGAGF+GSHLVDRLM    + VIV DNFFTG K+N+    G+PRFELIRHD
Sbjct: 29  QSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHD 88

Query: 169 VVEPLLLE 176
           V E L++E
Sbjct: 89  VTETLMIE 96


>Medtr4g063600.2 | UDP-glucuronic acid decarboxylase | HC |
           chr4:23491374-23487063 | 20130731
          Length = 342

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 110 RKGLRIVVTGGAGFVGSHLVDRLMA-RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 168
           +  +RI+VTGGAGF+GSHLVDRLM    + VIV DNFFTG K+N+    G+PRFELIRHD
Sbjct: 29  QSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHD 88

Query: 169 VVEPLLLE 176
           V E L++E
Sbjct: 89  VTETLMIE 96


>Medtr2g096660.2 | UDP-glucuronic acid decarboxylase | HC |
           chr2:41272127-41267236 | 20130731
          Length = 351

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 110 RKGLRIVVTGGAGFVGSHLVDRLMA-RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 168
           +  +RI+VTGGAGF+GSHLVDRLM    + VIV DN+FTG K+N+    G+PRFELIRHD
Sbjct: 35  QSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHD 94

Query: 169 VVEPLLLE 176
           V E LL+E
Sbjct: 95  VTETLLVE 102


>Medtr2g096660.1 | UDP-glucuronic acid decarboxylase | HC |
           chr2:41272544-41267236 | 20130731
          Length = 351

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 110 RKGLRIVVTGGAGFVGSHLVDRLMA-RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 168
           +  +RI+VTGGAGF+GSHLVDRLM    + VIV DN+FTG K+N+    G+PRFELIRHD
Sbjct: 35  QSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHD 94

Query: 169 VVEPLLLE 176
           V E LL+E
Sbjct: 95  VTETLLVE 102


>Medtr2g096660.3 | UDP-glucuronic acid decarboxylase | HC |
           chr2:41272348-41267236 | 20130731
          Length = 351

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 110 RKGLRIVVTGGAGFVGSHLVDRLMA-RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 168
           +  +RI+VTGGAGF+GSHLVDRLM    + VIV DN+FTG K+N+    G+PRFELIRHD
Sbjct: 35  QSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHD 94

Query: 169 VVEPLLLE 176
           V E LL+E
Sbjct: 95  VTETLLVE 102


>Medtr0354s0040.1 | UDP-D-glucuronate 4-epimerase | HC |
           scaffold0354:11863-10598 | 20130731
          Length = 421

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 12/86 (13%)

Query: 86  NHEYKQPAFHHRIHSVGKIPLGIKRKGLRIVVTGGAGFVGSHLVDRLMARGDSVIVVDNF 145
            + Y   A+  ++ S  K+     + G+ ++VTG AGFVGSH+   L  RGD V+ +DNF
Sbjct: 58  TYNYGGAAWEKKVRSSAKV---TSKNGVSVLVTGAAGFVGSHVSIALKRRGDGVVGIDNF 114

Query: 146 FTGRKENVMHHFGNPRFELIRHDVVE 171
                    + + +P  +L R  ++E
Sbjct: 115 ---------NDYYDPMLKLGRQALLE 131