Miyakogusa Predicted Gene

Lj5g3v1616840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1616840.1 Non Characterized Hit- tr|H3E8L7|H3E8L7_PRIPA
Uncharacterized protein OS=Pristionchus pacificus
GN=P,36.78,2e-16,Na_Ca_ex,Sodium/calcium exchanger membrane region;
seg,NULL; SODIUM/CALCIUM EXCHANGER,NULL,CUFF.55632.1
         (529 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g088430.1 | magnesium/proton exchanger-like protein | HC |...   868   0.0  
Medtr7g112660.1 | magnesium/proton exchanger, putative | HC | ch...    69   1e-11
Medtr3g062620.1 | magnesium/proton exchanger | LC | chr3:2830002...    62   1e-09
Medtr1g095800.1 | transmembrane protein, putative | LC | chr1:43...    52   1e-06

>Medtr1g088430.1 | magnesium/proton exchanger-like protein | HC |
           chr1:39544838-39538249 | 20130731
          Length = 530

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/527 (81%), Positives = 461/527 (87%), Gaps = 5/527 (0%)

Query: 4   ISSIMGH-EKCQRYLIFNAETALGDYFRVFLYFLGLAYCFLGLSAITARFFKSMENVVKH 62
           +SS + H EKC+ YLIF+ ET LG+  R+ LYFLGLAYCF+GLSAIT+RFF+SMENVVKH
Sbjct: 8   LSSFLAHDEKCESYLIFSGETNLGNSVRILLYFLGLAYCFIGLSAITSRFFQSMENVVKH 67

Query: 63  TREVVEVDPVTKIEVIRHEKVWNYTIADISLLAFGTSFPQISLATIDAIQXXXXXXXXXX 122
           +REVV +DPVTK E IRHEKVWNYTIADISLLAFGTSFPQISLATIDAI+          
Sbjct: 68  SREVVVIDPVTKAETIRHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNLGDLYAGGL 127

Query: 123 XXXTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWT 182
              TLVGSAAFDLFPIHAVCVV+PKAGELKKIADLGVW+VELFWSFWAYIWLYIILEVWT
Sbjct: 128 GPGTLVGSAAFDLFPIHAVCVVIPKAGELKKIADLGVWIVELFWSFWAYIWLYIILEVWT 187

Query: 183 PNVVTLWEAXXXXXXXXXXXTHAYAQDKRWPYISLPIARDERPEDWVPEETPCFKQKSHE 242
           PNV+TLWEA            HAYAQDKRWPYISLPIARDERPEDWVPEETP  KQKSHE
Sbjct: 188 PNVITLWEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETP--KQKSHE 245

Query: 243 KVEYSEIIQVNEEDRDTVDIFSIHSSNPRDTTMYTRVPQIDGIIENSDKAKDSMLEDTHL 302
           +VE SEI   NEE+ DTVDIFSIHS NPRD + Y RVPQID   ENSDK  ++ LEDT L
Sbjct: 246 RVECSEINHFNEENGDTVDIFSIHSENPRDMS-YVRVPQIDDA-ENSDKVIETRLEDTCL 303

Query: 303 LTIWGQQFVDALMLESHESKKMNNVYLRIAQICWQLLLLPWRFLFAFVPPCHIAHGWISF 362
           LTIW QQFVDAL +ES ESKKMNN+Y+R A+I WQLLLLPWRF+FAFVPPCHIAHGWISF
Sbjct: 304 LTIWKQQFVDALTVESQESKKMNNIYIRTARIFWQLLLLPWRFMFAFVPPCHIAHGWISF 363

Query: 363 ICSLLFISGIAYIVTKLTDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTAD 422
           ICSLLFISGIAYIVTK+TDLISCVTGINAYVIAFTALASGTSWPDLVASKIAA+RQKTAD
Sbjct: 364 ICSLLFISGIAYIVTKITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAKRQKTAD 423

Query: 423 SAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLHIQNAGGLSFSLIVFFCTSVGCI 482
           SAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYR+PL IQNAGGLSFSLIVFF TSVGCI
Sbjct: 424 SAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYRQPLRIQNAGGLSFSLIVFFATSVGCI 483

Query: 483 SVLVVRRLVFGAELGGPRLWAWITAVFFMFLWIIFVVLSSLKVSGFI 529
           SVLV RR+VFGAELGGPRLWAWIT  FFM LWIIFVVLSSLKVSGFI
Sbjct: 484 SVLVARRIVFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI 530


>Medtr7g112660.1 | magnesium/proton exchanger, putative | HC |
           chr7:46346769-46346581 | 20130731
          Length = 62

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/40 (82%), Positives = 36/40 (90%)

Query: 394 IAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNS 433
           ++FTAL SGTSWPDLV SKIAAERQKTADSAI NITC +S
Sbjct: 21  LSFTALTSGTSWPDLVVSKIAAERQKTADSAIVNITCRSS 60


>Medtr3g062620.1 | magnesium/proton exchanger | LC |
           chr3:28300020-28299817 | 20130731
          Length = 67

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 34/35 (97%)

Query: 394 IAFTALASGTSWPDLVASKIAAERQKTADSAIANI 428
           ++FTALASGTSWPDLVASKIA+ERQK A+SAIANI
Sbjct: 26  LSFTALASGTSWPDLVASKIASERQKIANSAIANI 60


>Medtr1g095800.1 | transmembrane protein, putative | LC |
           chr1:43123262-43118258 | 20130731
          Length = 83

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query: 131 AAFDLFPIHAVCVVVPKAGELKKIADLGVWLVEL 164
             FDLFPIH +CVV+ K+ +LKKI DLGVW+V++
Sbjct: 38  VVFDLFPIHVICVVILKSEKLKKIVDLGVWIVDV 71