Miyakogusa Predicted Gene

Lj5g3v1615820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1615820.1 Non Characterized Hit- tr|I1L7U6|I1L7U6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2511
PE=,82.88,0,seg,NULL; FAD_binding_7,DNA photolyase,
FAD-binding/Cryptochrome, C-terminal; CRYPTOCHROME,NULL; no
,CUFF.55637.1
         (222 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g088420.1 | photolyase/blue-light receptor PHR2 | HC | chr...   353   7e-98
Medtr3g108700.1 | cryptochrome, DASH family protein | HC | chr3:...   102   4e-22

>Medtr1g088420.1 | photolyase/blue-light receptor PHR2 | HC |
           chr1:39533075-39538236 | 20130731
          Length = 456

 Score =  353 bits (906), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 175/222 (78%), Positives = 182/222 (81%), Gaps = 2/222 (0%)

Query: 1   MKEENVEVKYFWGSTLYHVEDLPFQLEDMPSNYGGFRDRVQKLQIRNTIEALDQLKGLPK 60
           MKEENVEVKYFWGSTLYHVEDLPF LEDMPSNYGGFRDRVQKL+IR TIEALDQLKGLP 
Sbjct: 237 MKEENVEVKYFWGSTLYHVEDLPFGLEDMPSNYGGFRDRVQKLEIRKTIEALDQLKGLPS 296

Query: 61  RGDVEPGDIPSLMDLGLNSPAAMSQDGKPAASSTMVGGETEALQRLKRFAAELEAQPHKG 120
           RGDV+ GDIP+LMDLGLN  A MSQDGK   +S+M GGETEALQRLKRFAAE EAQ +KG
Sbjct: 297 RGDVQLGDIPTLMDLGLNPSATMSQDGKQVPNSSMTGGETEALQRLKRFAAECEAQSNKG 356

Query: 121 SKNGTQDSIYGANFSCKISPWLAMGCLSPRTMFDELKKTTSRAIXXXXXXXXXXXXXXXX 180
            K+G QDSIYGANFSCKISPWLAMGCLSPR MFDELKKT S A                 
Sbjct: 357 FKDGAQDSIYGANFSCKISPWLAMGCLSPRAMFDELKKTASSA--VSASSSKNDGGSSKT 414

Query: 181 XXXWLMFELLWRDFFRFITKKYSSAKKQLEAAPVTACTGALA 222
              WLMFELLWRDFFRFITKKYSS KKQLEAAP TACTGALA
Sbjct: 415 GTNWLMFELLWRDFFRFITKKYSSTKKQLEAAPATACTGALA 456


>Medtr3g108700.1 | cryptochrome, DASH family protein | HC |
           chr3:50213300-50207366 | 20130731
          Length = 595

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 28/201 (13%)

Query: 7   EVKYFWGSTLYHVEDLPFQLEDMPSNYGGFRDRVQ-KLQIRNTIEALDQLKGLPKRGDVE 65
           ++++ WG+T+YH +DLPF +  +P  Y  FR   + K  +R+ I+    L   P   D  
Sbjct: 238 KLQFVWGTTMYHHDDLPFDVPCLPDVYTQFRKTAEAKCVVRSCIKLPTSLGPPPPIEDW- 296

Query: 66  PGDIPSLMDLGLNSPAAMSQDGKPAASSTMVGGETEALQRLKRFAAELEA-QPHKGSKNG 124
            G +PSL  LGL+S                VGGET AL R+  +  + +  + +K ++NG
Sbjct: 297 -GCLPSLEQLGLSSQNV-------NKGMKFVGGETAALSRIYEYFWKKDLLKVYKETRNG 348

Query: 125 TQDSIYGANFSCKISPWLAMGCLSPRTMFDELKKTTSRAIXXXXXXXXXXXXXXXXXXXW 184
               + G ++S K SPWLA G LSPR + +E+K+  +                      W
Sbjct: 349 ----MLGPDYSTKFSPWLASGSLSPRLIHEEVKRYENE-------------RQANSSTYW 391

Query: 185 LMFELLWRDFFRFITKKYSSA 205
           ++FEL+WRD+FRF++ KY ++
Sbjct: 392 VLFELIWRDYFRFLSVKYGNS 412