Miyakogusa Predicted Gene

Lj5g3v1605670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1605670.1 Non Characterized Hit- tr|K3ZED5|K3ZED5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si024929,38.76,2e-19,seg,NULL; DUF538,Protein of unknown function
DUF538; no description,Protein of unknown function DUF5,CUFF.55625.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g088250.1 | DUF538 family protein | HC | chr1:39482841-394...   208   2e-54
Medtr1g088260.1 | DUF538 family protein | HC | chr1:39478863-394...   131   4e-31
Medtr7g108775.1 | DUF538 family protein | HC | chr7:44427689-444...   125   3e-29
Medtr7g108775.2 | DUF538 family protein | HC | chr7:44427689-444...   124   4e-29
Medtr6g086680.1 | DUF538 family protein | HC | chr6:32207872-322...    78   4e-15
Medtr8g085580.1 | transmembrane protein, putative | HC | chr8:35...    67   8e-12
Medtr7g080280.1 | transmembrane protein, putative | HC | chr7:30...    65   3e-11
Medtr8g085590.1 | DUF538 family protein | HC | chr8:35457713-354...    59   2e-09
Medtr7g053107.1 | DUF538 family protein | HC | chr7:18695852-186...    58   5e-09
Medtr7g053107.2 | DUF538 family protein | HC | chr7:18695852-186...    58   5e-09
Medtr4g109140.1 | DUF538 family protein | HC | chr4:45280834-452...    55   4e-08
Medtr5g043190.1 | DUF538 family protein | HC | chr5:18978091-189...    54   5e-08
Medtr4g014490.1 | DUF538 family protein | HC | chr4:4095091-4098...    53   1e-07
Medtr7g070000.1 | DUF538 family protein | HC | chr7:25799301-257...    53   1e-07
Medtr2g010970.1 | transmembrane protein, putative | HC | chr2:26...    49   2e-06

>Medtr1g088250.1 | DUF538 family protein | HC |
           chr1:39482841-39484081 | 20130731
          Length = 162

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           +NFP G+LP GVT YELD+S+G FRADLN SCSF+L+GSYQLSY STITG+I++NRLTDL
Sbjct: 31  YNFPPGILPIGVTNYELDKSSGNFRADLNRSCSFSLQGSYQLSYKSTITGKITENRLTDL 90

Query: 95  RGISVKVLFFWLNILEVVRSSDQLDFSVGISSASFPLDSFFVSPMCGCGLDCDLIRIRKF 154
           RGISVKV+FFW+NILEVVR SD LDFSVG++SA+FPLD FF SP CGCGLDCD +RIRK 
Sbjct: 91  RGISVKVMFFWVNILEVVRKSDNLDFSVGVASAAFPLDDFFESPQCGCGLDCDPLRIRKL 150

Query: 155 K-SDRNPSLSS 164
           K + +NPSLSS
Sbjct: 151 KLNTKNPSLSS 161


>Medtr1g088260.1 | DUF538 family protein | HC |
           chr1:39478863-39479249 | 20130731
          Length = 128

 Score =  131 bits (329), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           + FP GLLPKG   Y L+  TG+F      +CSF +E SY LSY STI+G IS NRL  L
Sbjct: 3   YGFPMGLLPKGAIGYSLNRETGQFSVYFEKTCSFVIE-SYTLSYKSTISGVISQNRLYKL 61

Query: 95  RGISVKVLFFWLNILEVVRSSDQLDFSVGISSASFPLDSFFVSPMCGCGLDCDLI 149
           +G+SV++L  WLNI+EV R  + +DFSVGI+SA F +++F   P CGCG DC+ I
Sbjct: 62  KGVSVRILLLWLNIVEVSRKGNDIDFSVGITSAGFGVENFLECPQCGCGFDCNNI 116


>Medtr7g108775.1 | DUF538 family protein | HC |
           chr7:44427689-44426585 | 20130731
          Length = 187

 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 1/113 (0%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           ++FP G+LP+G T YEL+++TGKF    + +C F ++ SY L Y STI G IS  +L+ L
Sbjct: 38  YDFPVGILPQGATGYELNKNTGKFTVYFDDTCIFPIK-SYDLKYKSTIKGVISKGKLSKL 96

Query: 95  RGISVKVLFFWLNILEVVRSSDQLDFSVGISSASFPLDSFFVSPMCGCGLDCD 147
           +G++VKV   WL I+EV R  D L FSVGI+ A F +D+F   P CGCG DC+
Sbjct: 97  KGVTVKVELLWLKIVEVTRHDDYLQFSVGIAYAKFGIDNFLEIPQCGCGFDCN 149


>Medtr7g108775.2 | DUF538 family protein | HC |
           chr7:44427689-44427207 | 20130731
          Length = 160

 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 1/113 (0%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           ++FP G+LP+G T YEL+++TGKF    + +C F ++ SY L Y STI G IS  +L+ L
Sbjct: 38  YDFPVGILPQGATGYELNKNTGKFTVYFDDTCIFPIK-SYDLKYKSTIKGVISKGKLSKL 96

Query: 95  RGISVKVLFFWLNILEVVRSSDQLDFSVGISSASFPLDSFFVSPMCGCGLDCD 147
           +G++VKV   WL I+EV R  D L FSVGI+ A F +D+F   P CGCG DC+
Sbjct: 97  KGVTVKVELLWLKIVEVTRHDDYLQFSVGIAYAKFGIDNFLEIPQCGCGFDCN 149


>Medtr6g086680.1 | DUF538 family protein | HC |
           chr6:32207872-32203831 | 20130731
          Length = 156

 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 2/108 (1%)

Query: 35  FNFPAGLLPKG-VTAYELDESTGKFRADLNGSCSFTLEG-SYQLSYNSTITGRISDNRLT 92
           + FP GLLP   V  + +++++G+F   L G+C  TL   +Y  +Y+ TITG+I   ++ 
Sbjct: 42  YGFPIGLLPATTVLNHFINKTSGEFSVKLAGACKITLPPDNYVATYSDTITGKIVKGKIA 101

Query: 93  DLRGISVKVLFFWLNILEVVRSSDQLDFSVGISSASFPLDSFFVSPMC 140
           +L GI V+  F W  I  +  S D + F VG+ +A +P+ +F  SP C
Sbjct: 102 ELDGIRVRAFFKWWGITGIRSSGDDVVFEVGVVTAKYPVKNFVDSPPC 149


>Medtr8g085580.1 | transmembrane protein, putative | HC |
           chr8:35454743-35451991 | 20130731
          Length = 172

 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 6/109 (5%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           F  P+GLLP  VT Y L +  G+F   L+ +C    +  Y + Y  TITG++S   ++DL
Sbjct: 37  FGLPSGLLPNSVTDYSLSDD-GRFVVHLSDTCYIQFD--YLVYYEKTITGKLSYGSISDL 93

Query: 95  RGISVKVLFFWLNILEV---VRSSDQLDFSVGISSASFPLDSFFVSPMC 140
           +GI V+ +F W N+ E+   +  S+ + F VGI +    +D F     C
Sbjct: 94  KGIQVQRVFIWFNVDEIRVDLPPSNSIYFQVGIINKKLNVDQFKTVHSC 142


>Medtr7g080280.1 | transmembrane protein, putative | HC |
           chr7:30527799-30525171 | 20130731
          Length = 170

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 5/114 (4%)

Query: 37  FPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDLRG 96
            P GLLPKG+T YE++ ++G+F+  +   C+   E   ++ Y+  I G +   ++  L G
Sbjct: 50  LPVGLLPKGITRYEINGTSGEFQVWMKEPCNARFEN--EVHYDPNIKGTLGYGKIKGLSG 107

Query: 97  ISVKVLFFWLNILEV---VRSSDQLDFSVGISSASFPLDSFFVSPMCGCGLDCD 147
           ++ + LF W  +  +   + SS  + F VG++   F L  F   P C   +D D
Sbjct: 108 MTAQELFLWFPVKGIRVDLPSSGLIHFDVGVADKQFSLSLFEDPPDCNPEVDAD 161


>Medtr8g085590.1 | DUF538 family protein | HC |
           chr8:35457713-35458482 | 20130731
          Length = 161

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 4/108 (3%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           + FP G+LP  + +Y L  S G F   L   C     G   + Y++ +TG ++   ++ +
Sbjct: 38  YGFPKGILPNNIASYTLSPS-GYFTLHLQSPCYVRFSGQL-VYYDTLVTGTLTYGSVSGV 95

Query: 95  RGISVKVLFFWLNI--LEVVRSSDQLDFSVGISSASFPLDSFFVSPMC 140
            GI  K+LF WL +  +EV   S  L F VG  S   P + F   P C
Sbjct: 96  SGIQAKMLFIWLPVTGMEVDSPSGMLQFFVGALSKKLPANQFQDVPGC 143


>Medtr7g053107.1 | DUF538 family protein | HC |
           chr7:18695852-18693573 | 20130731
          Length = 178

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 38  PAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDLRGI 97
           P G+ PKGV  + + E  GKF   L+ +C+   E   +L Y+  ++G +S  ++  L G+
Sbjct: 46  PMGIFPKGVNEFNVGED-GKFWVHLDQACNAKFEN--ELHYDRNVSGSLSYGKIDALTGL 102

Query: 98  SVKVLFFWLNILEV---VRSSDQLDFSVGISSASFPLDSFFVSPMC 140
             + LF W  ++ +   V SS  + F VG +   F L  F   P C
Sbjct: 103 EAQDLFLWFPVMSIRVDVPSSGLIYFDVGAAYKQFSLSLFETPPEC 148


>Medtr7g053107.2 | DUF538 family protein | HC |
           chr7:18695852-18693287 | 20130731
          Length = 178

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 38  PAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDLRGI 97
           P G+ PKGV  + + E  GKF   L+ +C+   E   +L Y+  ++G +S  ++  L G+
Sbjct: 46  PMGIFPKGVNEFNVGED-GKFWVHLDQACNAKFEN--ELHYDRNVSGSLSYGKIDALTGL 102

Query: 98  SVKVLFFWLNILEV---VRSSDQLDFSVGISSASFPLDSFFVSPMC 140
             + LF W  ++ +   V SS  + F VG +   F L  F   P C
Sbjct: 103 EAQDLFLWFPVMSIRVDVPSSGLIYFDVGAAYKQFSLSLFETPPEC 148


>Medtr4g109140.1 | DUF538 family protein | HC |
           chr4:45280834-45279139 | 20130731
          Length = 174

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
            N P GL P+ +T YE DES GK    L+       + S  + Y++ + G +S  +L  +
Sbjct: 61  HNLPPGLFPRNITCYEFDESKGKLMVHLSSPSEVCFKDSSIVRYSNRVKGTLSKGKLIVI 120

Query: 95  RGISVKVLFFWLNILEV-VRS--SDQLDFSVGISSASFPLDSF 134
            G+  KVL  W+ +  V V S  SD++ F+      S P D++
Sbjct: 121 DGMKTKVL-VWVKVTSVYVESYKSDKVWFTTTGVKKSRPKDAY 162


>Medtr5g043190.1 | DUF538 family protein | HC |
           chr5:18978091-18975385 | 20130731
          Length = 180

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           ++ P GL P+ +  YE DE+ GK    L  +C  + + S  L Y + + G ++  +L+ +
Sbjct: 68  YSLPLGLFPQNIICYEFDETKGKLIVYLPSACEVSFKDSSVLRYATRVKGVLTRGKLSAI 127

Query: 95  RGISVKVLFFWLNILEVV---RSSDQLDFSVGISSASFPLDSF 134
            G+  KVL  W+ +  V      SD++  + G+   S P D++
Sbjct: 128 EGMKTKVL-VWVKVTSVTVEGYKSDKIWVTAGVKK-SRPKDAY 168


>Medtr4g014490.1 | DUF538 family protein | HC | chr4:4095091-4098063
           | 20130731
          Length = 170

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           ++ P G+ P+  T YE +E TGK    +   C    + S  L + +T+TG +   +L D+
Sbjct: 61  YDLPIGIFPRDATNYEFNEETGKLEVFIPQVCEVGYKDSSVLRFFTTVTGYLEKGKLADI 120

Query: 95  RGISVKVLFFWLNILEVVRSSDQLDFSVGISSA 127
            G+  KV+  W+ +  +     +L  + G+   
Sbjct: 121 EGMKTKVI-IWVKVTTIFSEGSKLYVTAGMKKT 152


>Medtr7g070000.1 | DUF538 family protein | HC |
           chr7:25799301-25796361 | 20130731
          Length = 170

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 35  FNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDL 94
           ++ P G+ P+  T YE +E T K    +   C      S  L + +T++G +   +L D+
Sbjct: 61  YDLPIGIFPRDATNYEFNEETRKLVVYIPQVCEVGYRDSSVLRFTTTVSGYLEKGKLADI 120

Query: 95  RGISVKVLFFWLNILEVVRSSDQLDFSVGISSA 127
            G+  KVL  W+ +  +     +L+F+ G+   
Sbjct: 121 EGMKTKVL-VWVKVTAISSEGPKLNFTAGMKKT 152


>Medtr2g010970.1 | transmembrane protein, putative | HC |
           chr2:2606042-2604577 | 20130731
          Length = 161

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 6/110 (5%)

Query: 34  GFNFPAGLLPKGVTAYELDESTGKFRADLNGSCSFTLEGSYQLSYNSTITGRISDNRLTD 93
           G   P GL P+ V +Y LD+S G     L+  C    E   ++ + + +   +S  +L  
Sbjct: 34  GHGLPVGLFPESVKSYHLDQS-GVLEVKLDSPCIVKYET--RVFFETVVRANLSFGQLKG 90

Query: 94  LRGISVKVLFFWLNILEVV---RSSDQLDFSVGISSASFPLDSFFVSPMC 140
           L G+S + LF WL + +++    SS  +   +G++     L  F   P+C
Sbjct: 91  LEGLSQEELFLWLPVKDIIVDDPSSGLILIDIGLAYKQLSLSLFEDPPIC 140