Miyakogusa Predicted Gene

Lj5g3v1602410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1602410.1 tr|I3SBE6|I3SBE6_LOTJA Ribosomal protein L19
OS=Lotus japonicus PE=2 SV=1,99.52,0,coiled-coil,NULL;
RIBOSOMAL_L19E,Ribosomal protein L19/L19e conserved site;
Ribosomal_L19e,Ribosomal,CUFF.55714.1
         (210 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g087910.1 | 60S ribosomal protein L19 | HC | chr1:39358053...   338   3e-93
Medtr7g108955.1 | 60S ribosomal protein L19 | HC | chr7:44555076...   337   3e-93
Medtr1g087910.2 | 60S ribosomal protein L19 | HC | chr1:39358041...   337   5e-93
Medtr7g108955.2 | 60S ribosomal protein L19 | HC | chr7:44555183...   336   9e-93

>Medtr1g087910.1 | 60S ribosomal protein L19 | HC |
           chr1:39358053-39355401 | 20130731
          Length = 213

 Score =  338 bits (866), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 170/188 (90%), Positives = 172/188 (91%)

Query: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL+ASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI              KYREAKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEK 188
            AQGPGEK
Sbjct: 181 FAQGPGEK 188


>Medtr7g108955.1 | 60S ribosomal protein L19 | HC |
           chr7:44555076-44557091 | 20130731
          Length = 219

 Score =  337 bits (865), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 168/186 (90%), Positives = 171/186 (91%)

Query: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL++SVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI              KYREAKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 186
            AQGPG
Sbjct: 181 FAQGPG 186


>Medtr1g087910.2 | 60S ribosomal protein L19 | HC |
           chr1:39358041-39355531 | 20130731
          Length = 206

 Score =  337 bits (864), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 170/188 (90%), Positives = 172/188 (91%)

Query: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL+ASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI              KYREAKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEK 188
            AQGPGEK
Sbjct: 181 FAQGPGEK 188


>Medtr7g108955.2 | 60S ribosomal protein L19 | HC |
           chr7:44555183-44556767 | 20130731
          Length = 208

 Score =  336 bits (861), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 168/186 (90%), Positives = 171/186 (91%)

Query: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL++SVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKI              KYREAKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 186
            AQGPG
Sbjct: 181 FAQGPG 186