Miyakogusa Predicted Gene

Lj5g3v1602390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1602390.1 Non Characterized Hit- tr|I1L7S9|I1L7S9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16566
PE,91.53,0,FUMRATELYASE,Fumarate lyase; fumC_II: fumarate hydratase,
class II,Fumarate hydratase, class II; no ,CUFF.55610.1
         (497 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g087900.1 | fumarate hydratase | HC | chr1:39347184-393539...   858   0.0  
Medtr3g100220.1 | argininosuccinate lyase | HC | chr3:46052391-4...    52   9e-07

>Medtr1g087900.1 | fumarate hydratase | HC | chr1:39347184-39353989
           | 20130731
          Length = 491

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/461 (90%), Positives = 445/461 (96%)

Query: 36  FREERDTFGPIQVPSDKLWGAQTQRSLQNFDIGGPRERMPEPIIRAFGILKKCAAKVNME 95
           FREERDTFGPIQVPSDKLWGAQTQRSLQNFDIGGPRERMPEPIIR+FGILKKCAAKVNME
Sbjct: 31  FREERDTFGPIQVPSDKLWGAQTQRSLQNFDIGGPRERMPEPIIRSFGILKKCAAKVNME 90

Query: 96  YGLDPTIAKAVMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKR 155
           YGLDPTI KA+M+AAQEVA+GK NDHFPLVVWQTGSGTQSNMNANEVIANRA+EILGHKR
Sbjct: 91  YGLDPTIGKAIMKAAQEVADGKHNDHFPLVVWQTGSGTQSNMNANEVIANRASEILGHKR 150

Query: 156 GEKHVHPNDHVNRSQSSNDTFPTVMHIAAAMEINSRVIPSLKTLHSTLNSKSIEFKDIVK 215
           GEK VHPNDHVN SQSSNDTFPTVMHIAA  EINSR+IPSLKTLH+TL++KSIEFKDIVK
Sbjct: 151 GEKFVHPNDHVNMSQSSNDTFPTVMHIAAGTEINSRLIPSLKTLHATLDAKSIEFKDIVK 210

Query: 216 IGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVISTLPHMYQLAQGGTAVGTGLNTKKGFD 275
           IGRTHTQDATPLTLGQEFSGYTTQ+KY +DRVI+ LP MYQLAQGGTAVGTGLNTKKGFD
Sbjct: 211 IGRTHTQDATPLTLGQEFSGYTTQLKYSLDRVITILPRMYQLAQGGTAVGTGLNTKKGFD 270

Query: 276 VKIANAVADETHLPFVTAENKFEALAAHDAFVETSGALNTVATSLMKVANDIRLLGSGPR 335
           VK++ AVA ET+LPFVTAENKFEALAAHD+FVETSGALNT++ SLMK+ANDIRLLGSGPR
Sbjct: 271 VKVSLAVATETNLPFVTAENKFEALAAHDSFVETSGALNTISASLMKIANDIRLLGSGPR 330

Query: 336 CGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELNVFKP 395
           CGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELNVFKP
Sbjct: 331 CGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELNVFKP 390

Query: 396 MMASCLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAA 455
           ++AS LL S+RLLGD+ ASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYD AAA
Sbjct: 391 VIASNLLQSVRLLGDSCASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDKAAA 450

Query: 456 VAKKAHKEGTTLKEAALKLGVLSSEDFDNLVVPEKMIGPSE 496
           VAKKAHKEG+TLKEAALKLGVL+SE+FD+LVVPEKM+GPS+
Sbjct: 451 VAKKAHKEGSTLKEAALKLGVLTSEEFDSLVVPEKMLGPSD 491


>Medtr3g100220.1 | argininosuccinate lyase | HC |
           chr3:46052391-46055945 | 20130731
          Length = 517

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 37/296 (12%)

Query: 162 PNDHVNRSQSSNDTFPTVMHIAAAMEINSRVIPSLKTLHSTLNSKSIEFKDIVKIGRTHT 221
           P   ++ S+S ND   T + +     I+ +++ S+K L  +L   ++  + ++  G TH 
Sbjct: 157 PAKKLHTSRSRNDQVVTDLRLWCRDAID-KILASIKQLQVSLLKLALNNQGLIVPGYTHL 215

Query: 222 QDATPLTLGQEFSGYTTQVKYGIDRVISTLPHMYQLAQGGTAV-GTGLNTKK-------G 273
           Q A P+ L      Y  +++    R+I     M     G  A+ GTGL   +       G
Sbjct: 216 QRAQPVLLQHLLLAYVEEIERDAGRLIDCRARMNFCPLGACALAGTGLPIDRFMTSDALG 275

Query: 274 FDVKIANAVADETHLPFVTAENKFEALAAHDAFVETSGALNTVATSLMKVANDIRLLGSG 333
           F   + N++               +A++  D  +E   A    A  L ++  +  L  S 
Sbjct: 276 FTAPMRNSI---------------DAVSDRDFLLEFLSANAITAVHLSRLGEEWVLWASE 320

Query: 334 PRCGLGELILPEN--EPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELN 391
                G  I P +    GSSIMP K NP   E +    A+V+G  V +           N
Sbjct: 321 E---FG-FITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGGLVTLLTLCKGLPHAYN 376

Query: 392 VFKPMMASCLLHSLR-LLG--DASASFEKNCVRGIQANRERISKLLHESLMLVTSL 444
                    +  S+R +LG  + S+ F  N    I  NRERI K L    +  T+L
Sbjct: 377 RDLQEDKEPVFDSVRTILGMLEVSSEFAMN----ITFNRERIQKALPAGYLDATTL 428