Miyakogusa Predicted Gene

Lj5g3v1602330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1602330.1 101330_g.1
         (493 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g077610.1 | hypothetical protein | HC | chr7:29268736-2926...    59   1e-08
Medtr5g464480.1 | hypothetical protein | LC | chr5:26776643-2677...    57   3e-08
Medtr1g060140.1 | hypothetical protein | HC | chr1:26180509-2618...    52   1e-06

>Medtr7g077610.1 | hypothetical protein | HC |
           chr7:29268736-29268318 | 20130731
          Length = 89

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 57/145 (39%), Gaps = 63/145 (43%)

Query: 348 MDVKTAFLN----GNIDETIYMVQPENFVSGDPKNMACKLTKSIYGLKQASRQWYHKFHE 403
           MD+K AF      G+ DETIYMVQ        PK                          
Sbjct: 1   MDIKIAFFFFFFYGDFDETIYMVQLYKTSRLVPK-------------------------- 34

Query: 404 VILSFGFEVNVVEDCVYHKFSGSKYIFPVLYVDDILLATNDIGMLHETKRFLSRKFEMKD 463
                   VN+V+DC+YH F G                         TKR L++ FEMK 
Sbjct: 35  --------VNLVDDCIYHTFYG-------------------------TKRLLAKNFEMKV 61

Query: 464 LGDASFVLGIQIHRDRSRGILGLSQ 488
            G AS + GIQI +DRSR IL  SQ
Sbjct: 62  FGYASLIWGIQIDQDRSRRILRFSQ 86


>Medtr5g464480.1 | hypothetical protein | LC |
          chr5:26776643-26777215 | 20130731
          Length = 157

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 21 MVRSMICHPTLPESLWGEALKTAAYILNRVPTKAA-AKTPYELWTGRKPSLKHFHVWGC 78
          M R+MI    L +  W EA+ T  Y+ NR+  +    KT YEL+ GR+P++ +FH +GC
Sbjct: 1  MARTMIHENNLAKHFWAEAVNTTCYVQNRIYIRPILEKTVYELFKGRRPNISYFHQFGC 59


>Medtr1g060140.1 | hypothetical protein | HC |
           chr1:26180509-26181129 | 20130731
          Length = 206

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 17/86 (19%)

Query: 253 WIEAMKEEYKSMQDNKVWELVPLPEGVKPIGCKWIFKTKRDSNGNVERYKARLVAKGYTQ 312
           W+EA  +E K+++ N    ++    GV  IGCKW++K KR                  T+
Sbjct: 129 WVEAKNKELKALETNCNLSILDKLVGVNCIGCKWVYKVKRK-----------------TE 171

Query: 313 KEGIDFKETFSPVSSKDSFRTIMALV 338
            EGIDF  TFS V+   + R ++A  
Sbjct: 172 TEGIDFFNTFSQVAEMATVRMLIAFA 197