Miyakogusa Predicted Gene

Lj5g3v1601870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1601870.1 Non Characterized Hit- tr|I1JQQ4|I1JQQ4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,62.79,4e-18,DUF761,Protein of unknown function DUF761, plant;
seg,NULL,CUFF.55591.1
         (210 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g109300.1 | DUF761 domain protein | HC | chr7:44672240-446...   114   7e-26
Medtr1g087720.1 | DUF761 domain protein | HC | chr1:39254392-392...   100   1e-21

>Medtr7g109300.1 | DUF761 domain protein | HC |
           chr7:44672240-44671444 | 20130731
          Length = 264

 Score =  114 bits (285), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 116/247 (46%), Gaps = 56/247 (22%)

Query: 14  PKPQTTLDNNEPAANKAKNIFKVALFMMR--SQKSRVVPVDEESKSVWRKLVGSMRPLHL 71
           PKP  T   N    N A ++ ++ALFM+R  S+K  V+PVD++S S+WRK+VGS+RPLHL
Sbjct: 24  PKPVLTRKRN----NGAMDVIRLALFMLRGRSKKKSVIPVDDKSTSIWRKIVGSIRPLHL 79

Query: 72  QSNNSPPAQPKNNSNRKLKKMVTMPC---KSVANYSL----------------------- 105
           QSN SPP   ++NS +  + ++ +P    +S+   S+                       
Sbjct: 80  QSNQSPPLFSQSNSQKFDQPVILLPSSPPQSIGGGSVLTDFPAEEPFSPSPMSPANSCYA 139

Query: 106 ----------SEDGLEYAAS-----DFTNSPSPLHRRYASAIGLSXXXXXXXXXXXXXXX 150
                     S++   YAAS     +   S   +  RYASAIGL+               
Sbjct: 140 SAIGLNELVQSDENSRYAASAIGLNELVQSDEDI--RYASAIGLNELVQSDEDSRYASAI 197

Query: 151 XXXXXXXXXXXXXXXXXXXXXM-------IDAKAEDFIAQFYQQMRLQRLDVVDSRYNEI 203
                                        ID KA++FIAQFYQQMRLQRL+ VD RY E 
Sbjct: 198 GLNKLVQSDEENDRNDLIIEECNENGDDKIDDKADEFIAQFYQQMRLQRLNNVDRRYQER 257

Query: 204 SQRSLGL 210
           SQRSLGL
Sbjct: 258 SQRSLGL 264


>Medtr1g087720.1 | DUF761 domain protein | HC |
           chr1:39254392-39255153 | 20130731
          Length = 253

 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 94/152 (61%), Gaps = 24/152 (15%)

Query: 3   TENSIITNISTPKPQTTLDN--------NEPAANKAKNIFKVALFMMR--SQKSR-VVPV 51
            EN++I+    PK +TTLD+         + ++  +KN FKV +FM+R  S+K++ ++P+
Sbjct: 5   VENAMIS--YDPKSKTTLDHIPQPQPILKKGSSKGSKNFFKVVVFMLRGHSRKTKSIMPI 62

Query: 52  DEESKSVWRKLVGSMRPLHLQSNNSPPAQPKNNSNRKLKKMVTMPCKSVANYSLSEDGLE 111
           D ESKS+W+KL+GSMRP+HLQSN SPP Q  N  N   K ++     S+ + +  EDG  
Sbjct: 63  DNESKSMWKKLLGSMRPMHLQSNQSPP-QILNGENNHKKVVIENNVNSIID-TQGEDGF- 119

Query: 112 YAASDFTNSPSPLH--------RRYASAIGLS 135
           + AS+F NSPSP           RYASA+GLS
Sbjct: 120 HNASEFLNSPSPTRSCLASVASSRYASAVGLS 151



 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 35/39 (89%), Gaps = 3/39 (7%)

Query: 172 MIDAKAEDFIAQFYQQMRLQRLDVVDSRYNEISQRSLGL 210
           MIDAKAEDFIA+FY++MRLQR+DV   RYNE+S RSLGL
Sbjct: 218 MIDAKAEDFIAKFYREMRLQRMDV---RYNEMSMRSLGL 253