Miyakogusa Predicted Gene

Lj5g3v1601860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1601860.1 Non Characterized Hit- tr|K4AEY0|K4AEY0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si037437,32.56,8e-17,DUF761,Protein of unknown function DUF761,
plant; seg,NULL,NODE_48153_length_704_cov_61.022728.path1.1
         (180 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g087710.1 | DUF761 domain protein | HC | chr1:39240221-392...   233   6e-62

>Medtr1g087710.1 | DUF761 domain protein | HC |
           chr1:39240221-39239203 | 20130731
          Length = 185

 Score =  233 bits (595), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 126/189 (66%), Positives = 143/189 (75%), Gaps = 13/189 (6%)

Query: 1   MALKNRGVGQRAWNLLRLSLLWARKGGVFRRRLATELRLVPKYLKRLGHTT-PQNQINYY 59
           M+LKN  VG+RAWN LRLSLLWARK GVFRR+LATELRLVPKYLKRLGHTT P NQI +Y
Sbjct: 1   MSLKNGNVGRRAWNFLRLSLLWARKSGVFRRKLATELRLVPKYLKRLGHTTTPTNQI-HY 59

Query: 60  FERELSFDKTPIFHVKMYRPSSMRFNLPHIPCINPHVXXXXXXXXXXXXIVEYDNGRKSI 119
           FERELSFD+TP+F+VKMYRPSS+RF+LPHIPCINPHV            IVEYDNGRKS 
Sbjct: 60  FERELSFDETPMFNVKMYRPSSLRFHLPHIPCINPHV--DFDYDFHDDDIVEYDNGRKSD 117

Query: 120 VLVNAED------HGQDIA--FSXXXXXXXXXGIDKQADEFIARFYQQMKLQRQISLLQY 171
            LV+  D      HG ++              GIDK+ADEFIA+F QQM+LQRQISLLQY
Sbjct: 118 -LVDEGDYDEEFHHGVELCEEMGFREEVQEGEGIDKRADEFIAKFRQQMRLQRQISLLQY 176

Query: 172 TETPTRDTN 180
            +TP+RDTN
Sbjct: 177 KKTPSRDTN 185