Miyakogusa Predicted Gene

Lj5g3v1600750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1600750.1 Non Characterized Hit- tr|F1R7W9|F1R7W9_DANRE
Uncharacterized protein (Fragment) OS=Danio rerio
GN=s,31.61,4e-19,seg,NULL; DUF4149,Domain of unknown function DUF4149;
LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELAT,CUFF.55584.1
         (208 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g087320.1 | late embryogenesis abundant protein (LEA) fami...   338   2e-93
Medtr4g033265.1 | late embryogenesis abundant protein (LEA) fami...    60   1e-09
Medtr4g033230.1 | late embryogenesis abundant protein (LEA) fami...    60   1e-09

>Medtr1g087320.1 | late embryogenesis abundant protein (LEA) family
           protein | HC | chr1:39137551-39141656 | 20130731
          Length = 208

 Score =  338 bits (867), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 163/208 (78%), Positives = 179/208 (86%)

Query: 1   MGWLSRFLTAVTFLAVGVLFSPETLASKSTALSTYLKLAHLLSFSTAFGSALWVTFIGGI 60
           MG  +   TAV FLA+GV+FSPET  SKST LSTY+KLAHLL FS AFG+ALWVTFIGGI
Sbjct: 1   MGRATLITTAVVFLAIGVIFSPETFGSKSTTLSTYIKLAHLLGFSIAFGAALWVTFIGGI 60

Query: 61  IMFKNLPRHQFGNLQSKMFPAYFSLVGTCGAIAVASFGYLHPWKTASTSERYQLGFLLSS 120
           IMFKNLPRHQFGNLQSKMFPAYFS+VG C A+ VASFGYLHPWKT+STS+RYQLGFL+S+
Sbjct: 61  IMFKNLPRHQFGNLQSKMFPAYFSMVGVCIAVTVASFGYLHPWKTSSTSQRYQLGFLISA 120

Query: 121 FAFNLTNLFVFTPMTIELMKQRHKXXXXXXXXXXXXWSKNVEVAKTNPKLAAMNKKFGMI 180
            AFNLTNLFVFTPMTIE+MKQRHK            WSKNVEVAK NPKLA MNKKFGMI
Sbjct: 121 LAFNLTNLFVFTPMTIEMMKQRHKVERENSIGEEVGWSKNVEVAKKNPKLAKMNKKFGMI 180

Query: 181 HGLSSLSNIMSFGSLAVHSWYLAGKINL 208
           HGLSSL+NIMSFGSLA+HSWYLAGK++L
Sbjct: 181 HGLSSLANIMSFGSLAIHSWYLAGKLDL 208


>Medtr4g033265.1 | late embryogenesis abundant protein (LEA) family
           protein | HC | chr4:11644827-11646813 | 20130731
          Length = 441

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%)

Query: 32  LSTYLKLAHLLSFSTAFGSALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGTCGA 91
           + + + L +LL FS+ +G  +W+TF+   ++ + +PR QF  +QSK++P YF  +G C  
Sbjct: 228 VESLMSLLNLLGFSSGYGMNVWITFVSSYVLSRVMPRQQFAVVQSKIYPVYFRAMGYCLL 287

Query: 92  IAVASFGYLHPWKTASTSERYQLGFLLSSFAFNLTNLFVFTPMTIELMKQRHK 144
           +A+    + H  +  +     Q   LL+S      N     P   +LM +R K
Sbjct: 288 VALLGHVFGHGMRNNNGGGVMQSWNLLASLLTVFVNSVYLEPRATKLMFERMK 340


>Medtr4g033230.1 | late embryogenesis abundant protein (LEA) family
           protein | HC | chr4:11593316-11590692 | 20130731
          Length = 441

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%)

Query: 32  LSTYLKLAHLLSFSTAFGSALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGTCGA 91
           + + + L +LL FS+ +G  +W+TF+   ++ + +PR QF  +QSK++P YF  +G C  
Sbjct: 228 VESLMSLLNLLGFSSGYGMNVWITFVSSYVLSRVMPRQQFAVVQSKIYPVYFRAMGYCLL 287

Query: 92  IAVASFGYLHPWKTASTSERYQLGFLLSSFAFNLTNLFVFTPMTIELMKQRHK 144
           +A+    + H  +  +     Q   LL+S      N     P   +LM +R K
Sbjct: 288 VALLGHVFGHGMRNNNGGGVMQSWNLLASLLTVFVNSVYLEPRATKLMFERMK 340