Miyakogusa Predicted Gene
- Lj5g3v1600660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1600660.1 Non Characterized Hit- tr|J3LN17|J3LN17_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G2,39.71,3e-19,UNVRSLSTRESS,Universal stress protein A;
Usp,UspA; seg,NULL; Adenine nucleotide alpha
hydrolases-lik,CUFF.55575.1
(145 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g087200.1 | universal stress family protein | HC | chr1:39... 178 1e-45
Medtr1g083950.1 | universal stress family protein | HC | chr1:37... 117 3e-27
Medtr1g088640.1 | universal stress family protein | HC | chr1:39... 67 8e-12
Medtr5g065980.1 | adenine nucleotide alpha hydrolase superfamily... 65 2e-11
Medtr5g065980.2 | adenine nucleotide alpha hydrolase superfamily... 65 2e-11
Medtr1g088640.2 | universal stress family protein | HC | chr1:39... 63 8e-11
Medtr1g054750.1 | adenine nucleotide alpha hydrolase superfamily... 62 2e-10
Medtr1g054765.1 | adenine nucleotide alpha hydrolase superfamily... 60 5e-10
Medtr5g065980.3 | adenine nucleotide alpha hydrolase superfamily... 59 2e-09
Medtr8g058620.1 | universal stress family protein | HC | chr8:20... 55 2e-08
Medtr7g108830.1 | universal stress family protein | HC | chr7:44... 55 2e-08
Medtr1g088620.1 | universal stress protein, putative | LC | chr1... 52 1e-07
>Medtr1g087200.1 | universal stress family protein | HC |
chr1:39067837-39069242 | 20130731
Length = 158
Score = 178 bits (452), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 107/145 (73%), Gaps = 4/145 (2%)
Query: 1 METKERKTLVAVDESKESMHALSWCXXXXXXXXXXXXXXXXXXXXXYVRPPSAVYSLDAA 60
ME +ERK +VA+DES+ESM+ALSW YV+PPSAVYSLD+A
Sbjct: 1 MEKRERKIMVAIDESEESMYALSW----SISNLIADTNNNNKLVLLYVKPPSAVYSLDSA 56
Query: 61 GYIFSDDMIDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKK 120
GYIFS+D ID +E Y+ QLA SVM+RAE I N + ++I +EKVVGTGDAKNVIC+A KK
Sbjct: 57 GYIFSNDTIDTLENYSSQLAKSVMKRAEAIYRNFDDTDINIEKVVGTGDAKNVICNAAKK 116
Query: 121 LGADTLVLGSHDYGFFKRALLGSVS 145
LGADTLV+GSH YGF KRALLGSVS
Sbjct: 117 LGADTLVMGSHGYGFIKRALLGSVS 141
>Medtr1g083950.1 | universal stress family protein | HC |
chr1:37410238-37411974 | 20130731
Length = 165
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 10/141 (7%)
Query: 6 RKTLVAVDESKESMHALSWCXXXXXXXXXXXXXXXXXXXXXYVRPPSAVYS-LDAAGYIF 64
R+ +VA+DE +ES++AL+WC YV+PP VYS D GY+F
Sbjct: 9 RRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILL-----YVKPPRVVYSAFDGTGYLF 63
Query: 65 SDDMIDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKKLGAD 124
S D+ +EKY+ Q+A+ V+ +A+ +C ++ ++E GD ++VIC AV+K+G D
Sbjct: 64 SSDITATMEKYSQQVADCVLEKAKIVCNDVQNVETRIE----NGDPRDVICQAVQKMGVD 119
Query: 125 TLVLGSHDYGFFKRALLGSVS 145
LV+GSH YG KRA LGSVS
Sbjct: 120 ILVMGSHGYGVIKRAFLGSVS 140
>Medtr1g088640.1 | universal stress family protein | HC |
chr1:39647298-39645231 | 20130731
Length = 167
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 9 LVAVDESKESMHALSWCXXXXXXXXXXXXXXXXXXXXXYVRPPSAVYSLDAAGYIFSD-- 66
LVA+DES S +AL W + RP +A S+ AG +++
Sbjct: 15 LVAIDESDHSAYALKW----TLDHFFSTNNSVFKLVLVHARP-AATSSVGLAGPVYAGAA 69
Query: 67 DMIDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKKLGADTL 126
+++ ++ ++A V A+ +C + +++ VE V GDA+NV+C V+K A L
Sbjct: 70 EVLPIVDSDLRKIAARVAENAKQLCIKKSVNDVIVEVV--EGDARNVLCDTVEKYRASIL 127
Query: 127 VLGSHDYGFFKRALLGSVS 145
V+GSH YG KRA+LGSVS
Sbjct: 128 VVGSHGYGAIKRAVLGSVS 146
>Medtr5g065980.1 | adenine nucleotide alpha hydrolase superfamily
protein | HC | chr5:27794703-27791325 | 20130731
Length = 179
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 9 LVAVDESKESMHALSWCXXXXXXXXXXX-XXXXXXXXXXYVR-PPSAVYSLDAAGYIF-- 64
+VAVD S+ESM+AL W +V+ PPS L+ F
Sbjct: 11 VVAVDGSEESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGG 70
Query: 65 -SDDMID----AIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVK 119
SD + AIE + ++ +S+ A IC N KV V GD K IC V+
Sbjct: 71 PSDLEVPAFAAAIEAHQKRITDSIFDHALGICSTFNVKT-KVRTHVVVGDPKEKICETVQ 129
Query: 120 KLGADTLVLGSHDYGFFKRALLGSVS 145
L AD LV+GS +G KR LGSVS
Sbjct: 130 DLHADVLVMGSRAFGPIKRMFLGSVS 155
>Medtr5g065980.2 | adenine nucleotide alpha hydrolase superfamily
protein | HC | chr5:27794739-27791300 | 20130731
Length = 177
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 9 LVAVDESKESMHALSWCXXXXXXXXXXX-XXXXXXXXXXYVR-PPSAVYSLDAAGYIF-- 64
+VAVD S+ESM+AL W +V+ PPS L+ F
Sbjct: 11 VVAVDGSEESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGG 70
Query: 65 -SDDMID----AIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVK 119
SD + AIE + ++ +S+ A IC N KV V GD K IC V+
Sbjct: 71 PSDLEVPAFAAAIEAHQKRITDSIFDHALGICSTFNT---KVRTHVVVGDPKEKICETVQ 127
Query: 120 KLGADTLVLGSHDYGFFKRALLGSVS 145
L AD LV+GS +G KR LGSVS
Sbjct: 128 DLHADVLVMGSRAFGPIKRMFLGSVS 153
>Medtr1g088640.2 | universal stress family protein | HC |
chr1:39647464-39644938 | 20130731
Length = 164
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 9 LVAVDESKESMHALSWCXXXXXXXXXXXXXXXXXXXXXYVRPPSAVYSLDAAGYIFSDDM 68
LVA+DES S +AL W + RP +A S+ AG + ++
Sbjct: 15 LVAIDESDHSAYALKW----TLDHFFSTNNSVFKLVLVHARP-AATSSVGLAGP-GAAEV 68
Query: 69 IDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKKLGADTLVL 128
+ ++ ++A V A+ +C + +++ VE V GDA+NV+C V+K A LV+
Sbjct: 69 LPIVDSDLRKIAARVAENAKQLCIKKSVNDVIVEVV--EGDARNVLCDTVEKYRASILVV 126
Query: 129 GSHDYGFFKRALLGSVS 145
GSH YG KRA+LGSVS
Sbjct: 127 GSHGYGAIKRAVLGSVS 143
>Medtr1g054750.1 | adenine nucleotide alpha hydrolase superfamily
protein | HC | chr1:23932207-23929382 | 20130731
Length = 190
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 7 KTLVAVDESKESMHALSWCX----XXXXXXXXXXXXXXXXXXXXYVRP--PSAVYSLDAA 60
K +VA+DES S +AL W +V P + V+ +
Sbjct: 23 KVMVAIDESDGSFYALKWALDNLFNVMTTMEGTSSENEGMVFLVHVEPIFHNYVHPIGPG 82
Query: 61 GYIF--SDDMIDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAV 118
G F + ++D+++K + + ++ RA +C + +K E V+ GD + +IC A
Sbjct: 83 GAAFYPASVVVDSVKKGQQERSAVILSRALQMCKD---KQVKAESVILNGDPREMICQAS 139
Query: 119 KKLGADTLVLGSHDYGFFKRALLGSVS 145
+++ D L++GS G KRA LGSVS
Sbjct: 140 EQMQVDLLIMGSRGLGTLKRAFLGSVS 166
>Medtr1g054765.1 | adenine nucleotide alpha hydrolase superfamily
protein | HC | chr1:23937943-23936722 | 20130731
Length = 177
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 7 KTLVAVDESKESMHALSWC-------XXXXXXXXXXXXXXXXXXXXXYVRPPSAVYS--- 56
K +VA+DES S++AL W +V P Y+
Sbjct: 4 KVMVAIDESDGSLYALKWALDNLFNIMATDTMNGTTSENEEGIVFLVHVEPNFHTYAYPI 63
Query: 57 -LDAAGYIFSDDMI---DAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKN 112
+ AG F + D+++K + + ++ +A +C + +K E V+ GDA+
Sbjct: 64 PMGPAGVAFYPSIPEVGDSLKKAQQEKSAAIASQALQMCKD---KQVKAESVILNGDARE 120
Query: 113 VICSAVKKLGADTLVLGSHDYGFFKRALLGSVS 145
+IC A +K+ D L++GS G KRA LGSVS
Sbjct: 121 MICEATEKMQVDLLIMGSRGLGKLKRAFLGSVS 153
>Medtr5g065980.3 | adenine nucleotide alpha hydrolase superfamily
protein | HC | chr5:27794739-27791300 | 20130731
Length = 200
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 9 LVAVDESKESMHALSWCXXXXXXXXXXX-XXXXXXXXXXYVR-PPSAVYSLDAAGYIF-- 64
+VAVD S+ESM+AL W +V+ PPS L+ F
Sbjct: 11 VVAVDGSEESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGG 70
Query: 65 -SDDMID----AIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVK 119
SD + AIE + ++ +S+ A IC N KV V GD K IC V+
Sbjct: 71 PSDLEVPAFAAAIEAHQKRITDSIFDHALGICSTFNT---KVRTHVVVGDPKEKICETVQ 127
Query: 120 KLGADTLVLGSHDYGFFKRAL 140
L AD LV+GS +G KR L
Sbjct: 128 DLHADVLVMGSRAFGPIKRTL 148
>Medtr8g058620.1 | universal stress family protein | HC |
chr8:20231687-20233356 | 20130731
Length = 162
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 9 LVAVDESKESMHALSWCXXXXXXXXXXXXXXXXXXXXXYVRPPSAVYSLDAAGYIFSDDM 68
+V VD+S+ S +AL W PS ++ G + ++
Sbjct: 11 VVGVDDSEFSTYALEWTLDHLVTTLPNPIFKLVLVFAK----PSPSTNVGFVGPAGAAEI 66
Query: 69 IDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKKLGADTLVL 128
+ +E + A V+ RA++IC S V V GDA+NV+C AV K A LV+
Sbjct: 67 LPIVEADLKRTATIVIERAQEIC--TKRSVKDVVVEVVDGDARNVLCDAVDKHHASILVV 124
Query: 129 GSHDYGFFKRALLGSVS 145
GSH YG KRA+LGSVS
Sbjct: 125 GSHGYGAIKRAVLGSVS 141
>Medtr7g108830.1 | universal stress family protein | HC |
chr7:44313218-44315566 | 20130731
Length = 162
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 9 LVAVDESKESMHALSWCXXXXXXXXXXXXXXXXXXXXXYVRPPSAVYSLDAAGYIFSDDM 68
+V VD+S+ S +AL W PS ++ G + ++
Sbjct: 11 VVGVDDSEFSTYALEWTLDHLVTTLPNPIFKLVLVFAK----PSPSTNVGFVGPAGAAEI 66
Query: 69 IDAIEKYNMQLANSVMRRAEDICGNLNASNIKVEKVVGTGDAKNVICSAVKKLGADTLVL 128
+ +E + A V+ RA++IC S V V GDA+NV+C AV K A LV+
Sbjct: 67 LPIVEADLKRTATIVIERAQEIC--TKRSVKDVVVEVVDGDARNVLCDAVDKHHASILVV 124
Query: 129 GSHDYGFFKRALLGSVS 145
GSH YG KRA+LGSVS
Sbjct: 125 GSHGYGAIKRAVLGSVS 141
>Medtr1g088620.1 | universal stress protein, putative | LC |
chr1:39639422-39636831 | 20130731
Length = 286
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 5/58 (8%)
Query: 91 CGNLN---ASNIKVEKVVGTGDAKNVICSAVKKLGADTLVLGSHDYGFFKRALLGSVS 145
CG+L +++ VE V GDA+NV+C V+K A LV+GSH YG KRA+LGSVS
Sbjct: 210 CGHLPHLYVNDVIVEVV--EGDARNVLCDTVEKYRASILVVGSHGYGAIKRAVLGSVS 265