Miyakogusa Predicted Gene
- Lj5g3v1598560.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1598560.2 Non Characterized Hit- tr|I1L7Q1|I1L7Q1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49147 PE,87.93,0,no
description,WD40/YVTN repeat-like-containing domain; seg,NULL;
WD40,WD40 repeat; BROMODOMAIN-CONT,CUFF.55570.2
(348 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g087120.1 | WD40/YVTN repeat containing domain; bromodomai... 530 e-151
Medtr2g034500.1 | WD40/YVTN repeat containing domain; bromodomai... 451 e-127
Medtr3g075400.1 | nucleotide-binding protein | HC | chr3:3431870... 55 7e-08
Medtr4g104380.1 | nucleotide-binding protein | HC | chr4:4318905... 55 1e-07
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 50 4e-06
>Medtr1g087120.1 | WD40/YVTN repeat containing domain; bromodomain
protein | HC | chr1:39005297-39023503 | 20130731
Length = 1781
Score = 530 bits (1366), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/349 (74%), Positives = 279/349 (79%), Gaps = 2/349 (0%)
Query: 1 MIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPFNPRIAMSAGYD 60
MIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHT SSYVLDVHPFNPRIAMSAGYD
Sbjct: 633 MIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTESSYVLDVHPFNPRIAMSAGYD 692
Query: 61 GRTIVWDIWEGIPIRTYEIGRFKLVDGKFSPDGTSIILSDDVGQIYFLNTGQGESQKDAK 120
GRTIVWDIWEGIPIRTYEIGR +LVDGKFSPDGTSI+LSDDVGQIYFL+TGQGESQKDAK
Sbjct: 693 GRTIVWDIWEGIPIRTYEIGRIRLVDGKFSPDGTSIVLSDDVGQIYFLSTGQGESQKDAK 752
Query: 121 YDQVFLGDYRPLIQDTQGNVLDQETQLPPHRRNIQEPLCDSSMVPYPEPYQSQFQQRRLG 180
YDQ FLGDYRPLI+D QGNVLDQETQLPP+RR++QEPLCDS+M+PYPEPYQSQFQQRRLG
Sbjct: 753 YDQFFLGDYRPLIRDAQGNVLDQETQLPPNRRHVQEPLCDSTMLPYPEPYQSQFQQRRLG 812
Query: 181 ALGIEWRPSMIKYAVGPEFSVDQDYPLIPLIDLEGMFELQPELTDA-MFWEPEYDIASDD 239
ALGIEW PS+IKY VGP FSVDQD+ IPL+DLEGM + QPE DA +FWEPE+D SDD
Sbjct: 813 ALGIEWNPSLIKYTVGPVFSVDQDFQEIPLVDLEGMLDPQPEFLDASIFWEPEHDNVSDD 872
Query: 240 NNDSEYNVNEDNSSAAEQGSVSAIXXXXXXXXXXXXXXXXXXXXXXXKKHKVEVEVMTSS 299
NDSEYNVNEDNSSAAEQG+VSAI H V VE M SS
Sbjct: 873 -NDSEYNVNEDNSSAAEQGAVSAISSSDLEYSEGDSNNRDGFRRSRRTNHGVGVEGMISS 931
Query: 300 GRRIRKRNLDECNGNTSGSNRTIXXXXXXXXXXXXXXXXXXXXPQRVAA 348
GRR+RKRN +ECNGNTSG+NR PQR AA
Sbjct: 932 GRRVRKRNFEECNGNTSGNNRIKKSKGSSKSRKKKSSKAKTSRPQRTAA 980
>Medtr2g034500.1 | WD40/YVTN repeat containing domain; bromodomain
protein | HC | chr2:13169883-13184309 | 20130731
Length = 1726
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/318 (67%), Positives = 248/318 (77%), Gaps = 5/318 (1%)
Query: 1 MIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPFNPRIAMSAGYD 60
MI WSLDNRFVLAAIMDCRICVWNA DGSLVHSLTGHT S+YVLDVHPFNPRI MSAGYD
Sbjct: 542 MIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIVMSAGYD 601
Query: 61 GRTIVWDIWEGIPIRTYEIGRFKLVDGKFSPDGTSIILSDDVGQIYFLNTGQGESQKDAK 120
GRTIVWDIWEG+PIR +EI RFK+VDGKFSPDGTSIILSDD GQ+Y LNTGQGESQKDAK
Sbjct: 602 GRTIVWDIWEGVPIRIFEISRFKMVDGKFSPDGTSIILSDDAGQLYILNTGQGESQKDAK 661
Query: 121 YDQVFLGDYRPLIQDTQGNVLDQETQLPPHRRNIQEPLCDSSMVPYPEPYQSQFQQRRLG 180
YDQ FLGDYRPLIQDT GNVLDQETQ+ P+RRN+Q+ LCDS+M+PYPEPYQS+FQ+RRLG
Sbjct: 662 YDQFFLGDYRPLIQDTHGNVLDQETQITPYRRNLQDLLCDSAMIPYPEPYQSEFQRRRLG 721
Query: 181 ALGIEWRPSMIKYAVGPEFSVDQDYPLIPLIDLEGMFELQPELTDAMFWEPEYDIASDDN 240
ALG +WRPS +K A+G +FS+D Y ++PL DL+ + E PE DAM WEP+ ++ DD
Sbjct: 722 ALGHDWRPSPLKLAIGTDFSLDPAYHMLPLADLDQLAEPLPEFIDAMDWEPDIEVLVDD- 780
Query: 241 NDSEYNVNEDNSSAAEQGSVSAIXX----XXXXXXXXXXXXXXXXXXXXXKKHKVEVEVM 296
DSEYN+ +D+SS E+G S+ KK K +E M
Sbjct: 781 TDSEYNLTDDSSSRGEKGCSSSNASGDPGCSTDNSDDEDTHMDCIRRSKRKKQKTGIETM 840
Query: 297 TSSGRRIRKRNLDECNGN 314
TSSGRR+++RNLDEC GN
Sbjct: 841 TSSGRRVKRRNLDECEGN 858
>Medtr3g075400.1 | nucleotide-binding protein | HC |
chr3:34318708-34315394 | 20130731
Length = 509
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 7 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPFNPRIAMSAGYDGRTIVW 66
DNR V+AA + W+ G + H+LTGHT +DV + R +S+ YDG VW
Sbjct: 278 DNRSVIAASSSNNLYAWDLNLGRVHHTLTGHTDKVCAVDVSKVSSRHVVSSAYDGTIKVW 337
Query: 67 DIWEGIPIRTYEIGRFKLVDGKFSPDGTSII 97
D+ +G I T I FS DG +I+
Sbjct: 338 DLLKGYCINTI-IFHSNCNALSFSTDGQTIL 367
>Medtr4g104380.1 | nucleotide-binding protein | HC |
chr4:43189052-43185561 | 20130731
Length = 514
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 7 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPFNPRIAMSAGYDGRTIVW 66
DNR V+AA + VW+ G + H+LTGHT +DV + R+ +SA YD VW
Sbjct: 283 DNRSVIAASSSNNLYVWDLSSGRVRHTLTGHTDKVCAVDVSKVSSRLVVSAAYDRTIKVW 342
Query: 67 DIWEGIPIRT 76
D+ +G T
Sbjct: 343 DLMKGYCTNT 352
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 2 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPFNPR--IAMSAGY 59
+ +S D+R++++A D I +W+ GSLV +L GHT +YV V+ FNP+ + +S +
Sbjct: 84 LAFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHT--NYVFCVN-FNPQSNVIVSGSF 140
Query: 60 DGRTIVWDIWEGIPIRTYEIGRFKLVDGKFSPDGTSIILS--DDVGQIYFLNTGQ 112
D VWD+ G ++ + F+ DGT I+ S D + +I+ +TG
Sbjct: 141 DETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIWDASTGH 195