Miyakogusa Predicted Gene

Lj5g3v1598490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1598490.1 tr|G7IDQ8|G7IDQ8_MEDTR Fat-free-like protein
OS=Medicago truncatula GN=MTR_1g087100 PE=4 SV=1,86.41,0,SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; coiled-coil,NULL; seg,NULL;
Vps51,Vacuolar protein s,CUFF.55559.1
         (715 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g087100.1 | transport complex protein | HC | chr1:38991336...  1180   0.0  
Medtr1g087100.2 | transport complex protein | HC | chr1:38992676...   870   0.0  
Medtr7g109490.1 | hypothetical protein | LC | chr7:44784902-4478...    75   2e-13
Medtr1g087050.1 | transmembrane protein, putative | LC | chr1:38...    69   2e-11

>Medtr1g087100.1 | transport complex protein | HC |
           chr1:38991336-38999735 | 20130731
          Length = 773

 Score = 1180 bits (3052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/715 (81%), Positives = 618/715 (86%), Gaps = 3/715 (0%)

Query: 4   DELPLDDKAKRMRDLLXX---XXXXXXXXXXXXXXKLASRDDINSPSFDPDHYMNLQVHK 60
           DE+ LDDKAKRMRDLL                   K AS DDINS  FDPD YMN+ V+K
Sbjct: 5   DEVQLDDKAKRMRDLLSSFYSPDPSNSSNSAITSPKYASLDDINSSEFDPDQYMNILVYK 64

Query: 61  SNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMESNMEQLL 120
           SNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGME+NMEQLL
Sbjct: 65  SNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMETNMEQLL 124

Query: 121 DKIISVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKAEAYADAV 180
           DKI+SVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIK+EAYADAV
Sbjct: 125 DKIMSVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAV 184

Query: 181 RFYTGAMPIFKAYGDSSFQDCKQASEEAMATIVKNLQGKLFSDSESIQVRAEAAVLLKQL 240
           RFYTGAMPIFKAYGDSSF+DCKQASEEA+A ++KNLQGKLFSDSESIQVRAEAAVLLKQL
Sbjct: 185 RFYTGAMPIFKAYGDSSFKDCKQASEEAIANVIKNLQGKLFSDSESIQVRAEAAVLLKQL 244

Query: 241 DFPVNSLKAKLLEKLEQSITDIQLNPKELNNASGDLSPSASAHEAAIHEFVEAVRAFRVI 300
           DFPVN+LK KLLEKLEQSITDIQL+P+E+NN SGDLSPSAS+H+AA HEF+EAVRA  VI
Sbjct: 245 DFPVNNLKTKLLEKLEQSITDIQLSPEEINNGSGDLSPSASSHKAATHEFMEAVRALLVI 304

Query: 301 FPDSEEQLVKLAQDLVMKNFVITEEYVKTRIIPADLLGVLRVIWNDVLLIDEVLPEAVLS 360
           FPDSE+QLVK AQDLV KNF   EEYVKTRI P DLLGVLRV+W+DVLLIDEVLPEA LS
Sbjct: 305 FPDSEKQLVKFAQDLVTKNFATAEEYVKTRIHPEDLLGVLRVVWDDVLLIDEVLPEAALS 364

Query: 361 THSLEAAKFVVTLYVRNAFSHLLQDISDSLLQVLKKDGAEQYSLETVFGSSTKAVLQGCL 420
            HSLEAA  VV LYVR+AFSHLLQDISDS LQVLKKDGAEQYSLE V  SSTKAVLQG +
Sbjct: 365 NHSLEAANVVVKLYVRSAFSHLLQDISDSFLQVLKKDGAEQYSLEAVLDSSTKAVLQGGM 424

Query: 421 TVLQDFGKILDDDSGILVRLRELFIDWVQEGFQDFFRQLEDQFLLFSGRTSSPAIQVHGL 480
            VL  F KILDDDSGILVR RELF+D VQEGFQ FF+QLEDQFLLFSGR +S AIQ+HGL
Sbjct: 425 NVLLGFRKILDDDSGILVRQRELFVDLVQEGFQTFFKQLEDQFLLFSGRNNSSAIQLHGL 484

Query: 481 AEGAQGDKXXXXXXXXXXXXXXXIEQTVIPKITEEIAASFSRGSLRGYESGPAFVPGEIC 540
           AEGA  +K               IEQTVIPKITEEIAASFS GS+RGYES PAF PGEIC
Sbjct: 485 AEGAIDEKAFPGLVLVLAQLSAFIEQTVIPKITEEIAASFSGGSVRGYESRPAFAPGEIC 544

Query: 541 RKFRSGREKFLHLYINMRTQRISLLLKKRFTTPNWIKHKEPREVHMFVDLFLQELEVIGN 600
           RKFRS  EKFLHLYINMRTQRISL+LKKRFTTPNW+KHKEPREVHMFVD FLQELEVI N
Sbjct: 545 RKFRSAGEKFLHLYINMRTQRISLILKKRFTTPNWVKHKEPREVHMFVDFFLQELEVIHN 604

Query: 601 EVKQILPQSARKHRRTDXXXXXXXXXXNPLREEKLGRSNTQKARSQLLETHLAKLFKQKV 660
           EVKQILPQ  RKHRRTD          NPLREEKLGRSNTQ+ARSQLLETHLAKLFKQKV
Sbjct: 605 EVKQILPQGIRKHRRTDSNGSSVSSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKV 664

Query: 661 EIFTKVEYTQESVVTAIVKFCLKSLQEFVRLHTYNRSGFQQIQLDIQFLRIPIRE 715
           EIFTK+EYTQESVVT IVKFCLKS+QEFVRL T+NRSGFQQIQLDIQFLR PIRE
Sbjct: 665 EIFTKIEYTQESVVTTIVKFCLKSVQEFVRLQTFNRSGFQQIQLDIQFLRTPIRE 719


>Medtr1g087100.2 | transport complex protein | HC |
           chr1:38992676-38999735 | 20130731
          Length = 583

 Score =  870 bits (2248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/529 (81%), Positives = 458/529 (86%)

Query: 187 MPIFKAYGDSSFQDCKQASEEAMATIVKNLQGKLFSDSESIQVRAEAAVLLKQLDFPVNS 246
           MPIFKAYGDSSF+DCKQASEEA+A ++KNLQGKLFSDSESIQVRAEAAVLLKQLDFPVN+
Sbjct: 1   MPIFKAYGDSSFKDCKQASEEAIANVIKNLQGKLFSDSESIQVRAEAAVLLKQLDFPVNN 60

Query: 247 LKAKLLEKLEQSITDIQLNPKELNNASGDLSPSASAHEAAIHEFVEAVRAFRVIFPDSEE 306
           LK KLLEKLEQSITDIQL+P+E+NN SGDLSPSAS+H+AA HEF+EAVRA  VIFPDSE+
Sbjct: 61  LKTKLLEKLEQSITDIQLSPEEINNGSGDLSPSASSHKAATHEFMEAVRALLVIFPDSEK 120

Query: 307 QLVKLAQDLVMKNFVITEEYVKTRIIPADLLGVLRVIWNDVLLIDEVLPEAVLSTHSLEA 366
           QLVK AQDLV KNF   EEYVKTRI P DLLGVLRV+W+DVLLIDEVLPEA LS HSLEA
Sbjct: 121 QLVKFAQDLVTKNFATAEEYVKTRIHPEDLLGVLRVVWDDVLLIDEVLPEAALSNHSLEA 180

Query: 367 AKFVVTLYVRNAFSHLLQDISDSLLQVLKKDGAEQYSLETVFGSSTKAVLQGCLTVLQDF 426
           A  VV LYVR+AFSHLLQDISDS LQVLKKDGAEQYSLE V  SSTKAVLQG + VL  F
Sbjct: 181 ANVVVKLYVRSAFSHLLQDISDSFLQVLKKDGAEQYSLEAVLDSSTKAVLQGGMNVLLGF 240

Query: 427 GKILDDDSGILVRLRELFIDWVQEGFQDFFRQLEDQFLLFSGRTSSPAIQVHGLAEGAQG 486
            KILDDDSGILVR RELF+D VQEGFQ FF+QLEDQFLLFSGR +S AIQ+HGLAEGA  
Sbjct: 241 RKILDDDSGILVRQRELFVDLVQEGFQTFFKQLEDQFLLFSGRNNSSAIQLHGLAEGAID 300

Query: 487 DKXXXXXXXXXXXXXXXIEQTVIPKITEEIAASFSRGSLRGYESGPAFVPGEICRKFRSG 546
           +K               IEQTVIPKITEEIAASFS GS+RGYES PAF PGEICRKFRS 
Sbjct: 301 EKAFPGLVLVLAQLSAFIEQTVIPKITEEIAASFSGGSVRGYESRPAFAPGEICRKFRSA 360

Query: 547 REKFLHLYINMRTQRISLLLKKRFTTPNWIKHKEPREVHMFVDLFLQELEVIGNEVKQIL 606
            EKFLHLYINMRTQRISL+LKKRFTTPNW+KHKEPREVHMFVD FLQELEVI NEVKQIL
Sbjct: 361 GEKFLHLYINMRTQRISLILKKRFTTPNWVKHKEPREVHMFVDFFLQELEVIHNEVKQIL 420

Query: 607 PQSARKHRRTDXXXXXXXXXXNPLREEKLGRSNTQKARSQLLETHLAKLFKQKVEIFTKV 666
           PQ  RKHRRTD          NPLREEKLGRSNTQ+ARSQLLETHLAKLFKQKVEIFTK+
Sbjct: 421 PQGIRKHRRTDSNGSSVSSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKVEIFTKI 480

Query: 667 EYTQESVVTAIVKFCLKSLQEFVRLHTYNRSGFQQIQLDIQFLRIPIRE 715
           EYTQESVVT IVKFCLKS+QEFVRL T+NRSGFQQIQLDIQFLR PIRE
Sbjct: 481 EYTQESVVTTIVKFCLKSVQEFVRLQTFNRSGFQQIQLDIQFLRTPIRE 529


>Medtr7g109490.1 | hypothetical protein | LC |
           chr7:44784902-44781039 | 20130731
          Length = 102

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 45/58 (77%)

Query: 284 EAAIHEFVEAVRAFRVIFPDSEEQLVKLAQDLVMKNFVITEEYVKTRIIPADLLGVLR 341
           + A HEFVEA+ AF+V FPDSE QLV+LAQD V K+F++ EE VKT+I   DLL VLR
Sbjct: 11  DVAFHEFVEAIHAFQVTFPDSETQLVELAQDSVNKSFLVIEECVKTQIYAQDLLSVLR 68


>Medtr1g087050.1 | transmembrane protein, putative | LC |
           chr1:38967812-38969379 | 20130731
          Length = 131

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 124 ISVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQF 159
           +SVQSRS+NVNTSLFDKREHIEK H TCNLLRKVQ 
Sbjct: 1   MSVQSRSENVNTSLFDKREHIEKPHSTCNLLRKVQL 36