Miyakogusa Predicted Gene

Lj5g3v1598310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1598310.1 Non Characterized Hit- tr|I1JBF3|I1JBF3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57568
PE,86.45,0,seg,NULL; DUF4033,Domain of unknown function
DUF4033,CUFF.55547.1
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g086840.1 | D27 family protein, putative | HC | chr1:38882...   413   e-116
Medtr1g086840.2 | D27 family protein, putative | HC | chr1:38882...   296   1e-80
Medtr7g095920.1 | beta-carotene isomerase D27 | LC | chr7:384656...   132   4e-31
Medtr1g471050.1 | beta-carotene isomerase D27 | HC | chr1:314561...   124   6e-29
Medtr3g080840.1 | D27 family protein, putative | HC | chr3:36588...   118   5e-27

>Medtr1g086840.1 | D27 family protein, putative | HC |
           chr1:38882140-38884971 | 20130731
          Length = 260

 Score =  413 bits (1062), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/226 (87%), Positives = 211/226 (93%), Gaps = 1/226 (0%)

Query: 24  KTVEIAA-PKIEYKPNVVDDLFLNLFRNKLVQEVGWDSKKPGYDGLIEVANRLMMKGTTN 82
           KTV +AA PK EYKP V+DDLFLNLFR KLVQEVGW+SKKPGYDGLIEVANRLMMKGTTN
Sbjct: 35  KTVGVAAAPKSEYKPGVIDDLFLNLFRTKLVQEVGWESKKPGYDGLIEVANRLMMKGTTN 94

Query: 83  SDTIEATVRILRSLFPPFLLELYKMLIAPLGGGKIAAIMVARVTALTCQWLMGPCKVNSV 142
           SDTIEATVRILRSLFPPFLLELYKMLIAP+GGGK+AAIMVARVTALTCQWLMGPCKVNSV
Sbjct: 95  SDTIEATVRILRSLFPPFLLELYKMLIAPIGGGKVAAIMVARVTALTCQWLMGPCKVNSV 154

Query: 143 DLPDGTSCSSGVYVERCKYLEESKCVGICTNTCKFPTQAFFKDHMGVPLLMEPNFGDYSC 202
           +LP+GTS +SGV+VERCKYLEESKCVGIC NTCKFPTQ FFKDHMGVPLLM+PNF DYSC
Sbjct: 155 ELPNGTSWNSGVHVERCKYLEESKCVGICLNTCKFPTQTFFKDHMGVPLLMKPNFADYSC 214

Query: 203 QFKFGVLPPLPEDDTVLKEPCLEACPNASRRRIVTRKTDITECPKT 248
           QFKFGVLPPLPEDDTVLKEPCLEACPNAS RR+ +R   +T CPKT
Sbjct: 215 QFKFGVLPPLPEDDTVLKEPCLEACPNASLRRMASRNKGVTACPKT 260


>Medtr1g086840.2 | D27 family protein, putative | HC |
           chr1:38882140-38884357 | 20130731
          Length = 222

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/188 (79%), Positives = 163/188 (86%), Gaps = 4/188 (2%)

Query: 24  KTVEIAA-PKIEYKPNVVDDLFLNLFRNKLVQEVGWDSKKPGYDGLIEVANRLMMKGTTN 82
           KTV +AA PK EYKP V+DDLFLNLFR KLVQEVGW+SKKPGYDGLIEVANRLMMKGTTN
Sbjct: 35  KTVGVAAAPKSEYKPGVIDDLFLNLFRTKLVQEVGWESKKPGYDGLIEVANRLMMKGTTN 94

Query: 83  SDTIEATVRILRSLFPPFLLELYKMLIAPLGGGKIAAIMVARVTALTCQWLMGPCKVNSV 142
           SDTIEATVRILRSLFPPFLLELYKMLIAP+GGGK+AAIMVARVTALTCQWLMGPCKVNSV
Sbjct: 95  SDTIEATVRILRSLFPPFLLELYKMLIAPIGGGKVAAIMVARVTALTCQWLMGPCKVNSV 154

Query: 143 DLPDGTSCSSGVYVERCKYLEESKCVGICTNTCKFPTQAFFKDHMGVPLLMEPNFGDYSC 202
           +LP+GTS +SGV+VERCKYLEESKCVGIC NTCKFPTQ    D          +F  ++C
Sbjct: 155 ELPNGTSWNSGVHVERCKYLEESKCVGICLNTCKFPTQV--SDSSNYYHFFFMSFCVFTC 212

Query: 203 QFKF-GVL 209
           QF + G+L
Sbjct: 213 QFSWEGIL 220


>Medtr7g095920.1 | beta-carotene isomerase D27 | LC |
           chr7:38465640-38462597 | 20130731
          Length = 248

 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 7/194 (3%)

Query: 35  YKPNVVDDLFLNLFRNKLVQEVGWDSKKPGYDGLIEVANRLMMKGTTNS-DTIEATVRIL 93
           YK N  D + +N     +    G  + K GY+ L+E A   M K   N+    E T++ L
Sbjct: 50  YKDNWFDLIAINHLSKTVQAATGLRNNKSGYESLVEAAT--MAKQKFNAIQQQEVTIQAL 107

Query: 94  RSLFPPFLLELYKMLIAPLGGGKIAAIMVARVTALTCQWLMGPCKVNSVDLPDGTSCSSG 153
             LFP F+  L K    P    K      A +T +   WL+GP +V   ++ +G    + 
Sbjct: 108 DKLFPQFVFALIKKQPLP---PKFTREFFALITTMFFTWLLGPSEVRESEI-NGRIERNA 163

Query: 154 VYVERCKYLEESKCVGICTNTCKFPTQAFFKDHMGVPLLMEPNFGDYSCQFKFGVLPPLP 213
           VY+++C++LEE+ CVG+C N CK PTQ+F K+ +G+P+ M PNF D SC+  FG  PP  
Sbjct: 164 VYIKKCRFLEETNCVGMCVNMCKLPTQSFIKNTLGMPVNMVPNFDDMSCEMIFGQDPPAS 223

Query: 214 EDDTVLKEPCLEAC 227
            DD  LK+PC + C
Sbjct: 224 IDDPSLKQPCYKQC 237


>Medtr1g471050.1 | beta-carotene isomerase D27 | HC |
           chr1:31456119-31465321 | 20130731
          Length = 252

 Score =  124 bits (312), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 7/194 (3%)

Query: 35  YKPNVVDDLFLNLFRNKLVQEVGWDSKKPGYDGLIEVANRLMMK-GTTNSDTIEATVRIL 93
           YK N  D L +N     +    G  + K G+D L+E A     K  TT    I   +  L
Sbjct: 53  YKDNWFDKLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQKFNTTQQQGI--ILDAL 110

Query: 94  RSLFPPFLLELYKMLIAPLGGGKIAAIMVARVTALTCQWLMGPCKVNSVDLPDGTSCSSG 153
              FP  +L + + ++ P    K+A    A  T +   WL+GP +V   ++ +G    + 
Sbjct: 111 DRAFPKPILSVIRRVMPP---SKLAREYFAVFTTIFFAWLLGPSEVRESEI-NGRREKNI 166

Query: 154 VYVERCKYLEESKCVGICTNTCKFPTQAFFKDHMGVPLLMEPNFGDYSCQFKFGVLPPLP 213
           V++++C++LEE+ CVG+C N CK P+Q F KD  G+P+ M PNF D SC+  FG  PP  
Sbjct: 167 VHIKKCRFLEETNCVGMCINLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPAS 226

Query: 214 EDDTVLKEPCLEAC 227
            DD  LK+PC + C
Sbjct: 227 TDDPALKQPCYKLC 240


>Medtr3g080840.1 | D27 family protein, putative | HC |
           chr3:36588592-36585417 | 20130731
          Length = 266

 Score =  118 bits (295), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 112/216 (51%), Gaps = 21/216 (9%)

Query: 32  KIEYKPNVVDDLFLNLFRNKL--------------VQEVGW-DSKKPGYDGLIEVANRLM 76
           K  Y  ++ + +F+ LF  K+               ++ G  D  +  Y+  ++V+ R+M
Sbjct: 45  KTRYNDSIFEKVFMTLFARKMEPFAEPVIGNAKKKKEKKGLLDVWEYDYESFVDVSKRVM 104

Query: 77  MKGTTNSDTIEATVRILRSLFPPFLLELYKMLIAPLGGGKIAAIMVARVTALTCQWLMGP 136
           ++ +      +    +L S+ PP     ++ L  P    + AA   A +T     WL+GP
Sbjct: 105 LRRSRLQQQ-QVVREVLLSMLPPGAPAQFRKLFPPT---RWAAEFNAALTVPFFHWLVGP 160

Query: 137 CKVNSVDLPDGTSCSSGVYVERCKYLEESKCVGICTNTCKFPTQAFFKDHMGVPLLMEPN 196
            +V  V++ +G    SGV++++C+YLE S CVG C N CK PTQ FF +  G+PL M PN
Sbjct: 161 SEVIEVEI-NGVKQKSGVHIKKCRYLENSGCVGQCVNMCKIPTQDFFTNEFGLPLTMIPN 219

Query: 197 FGDYSCQFKFGVLPPLPEDDTVLKEPCL-EACPNAS 231
           F D SC   +G  PP  EDD V K+PC  + CP A+
Sbjct: 220 FEDMSCDMVYGQTPPSFEDDPVSKQPCYADICPVAN 255