Miyakogusa Predicted Gene

Lj5g3v1563140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1563140.1 tr|Q0PJK7|Q0PJK7_SOYBN MYB transcription factor
MYB76 OS=Glycine max GN=MYB76 PE=2 SV=1,48.15,0.00000000003,
,CUFF.55528.1
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g086530.1 | myb transcription factor | HC | chr1:38719605-...    65   2e-11

>Medtr1g086530.1 | myb transcription factor | HC |
           chr1:38719605-38720569 | 20130731
          Length = 278

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 63/109 (57%), Gaps = 27/109 (24%)

Query: 1   MPRLMERIN-----ASTGGSSNDQTTFCSNTQAHSDSC-VMANPQMLL-EVSSYSSGVEN 53
           +PRL+ERI      A T   S+ Q T C NT+AHS++C   ANP ML  EVSSYSSGVE 
Sbjct: 158 IPRLIERIQSSGATADTNSYSHGQITTCKNTKAHSETCGANANPPMLQSEVSSYSSGVE- 216

Query: 54  VQPPSLSESSVSYNLMGGAGSNNWSPDSAEMG----QFNYSD-NMQAFE 97
           VQ     ES+VSYNLM          D AE+G     +N  D N+Q FE
Sbjct: 217 VQV----ESNVSYNLM----------DCAELGSTWQDWNCLDSNIQEFE 251