Miyakogusa Predicted Gene
- Lj5g3v1533550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1533550.1 Non Characterized Hit- tr|I1NES2|I1NES2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,75.16,0,HELICASE
CONSERVED C-TERMINAL DOMAIN, PUTATIVE (FRAGMENT),NULL; FAMILY NOT
NAMED,NULL; P-loop contai,CUFF.55481.1
(756 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 493 e-139
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 489 e-138
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 488 e-138
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 340 3e-93
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 333 4e-91
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 259 9e-69
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 259 9e-69
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 251 2e-66
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 250 4e-66
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 250 4e-66
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 247 4e-65
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 247 4e-65
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 243 6e-64
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 240 3e-63
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 240 4e-63
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 237 4e-62
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 235 1e-61
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 234 2e-61
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 230 4e-60
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 226 7e-59
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 226 8e-59
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 226 8e-59
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 224 2e-58
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 224 2e-58
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 224 2e-58
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 224 3e-58
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 223 4e-58
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 221 2e-57
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 221 3e-57
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 220 4e-57
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 218 2e-56
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 216 7e-56
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 215 1e-55
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 214 2e-55
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 214 2e-55
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 214 2e-55
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 212 1e-54
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 210 5e-54
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 208 2e-53
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 207 3e-53
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 204 2e-52
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 204 3e-52
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 201 2e-51
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 195 1e-49
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 195 1e-49
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 195 1e-49
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 195 1e-49
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 195 2e-49
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 193 4e-49
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 193 4e-49
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 192 7e-49
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 189 1e-47
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 187 3e-47
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 187 4e-47
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 185 1e-46
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 185 2e-46
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 184 3e-46
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 181 3e-45
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 178 1e-44
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 178 2e-44
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 176 5e-44
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 169 1e-41
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 168 2e-41
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 165 2e-40
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 164 4e-40
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 163 5e-40
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 161 2e-39
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 156 6e-38
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 150 5e-36
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 147 3e-35
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 145 1e-34
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 144 2e-34
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 140 4e-33
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 140 4e-33
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 140 4e-33
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 140 5e-33
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 140 5e-33
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 140 5e-33
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 138 2e-32
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 138 2e-32
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 138 3e-32
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 135 1e-31
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 135 2e-31
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 133 6e-31
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 128 2e-29
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 118 2e-26
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 114 5e-25
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 110 7e-24
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 109 1e-23
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 109 1e-23
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 108 2e-23
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 103 5e-22
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 98 2e-20
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 98 3e-20
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 94 5e-19
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 89 2e-17
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 82 1e-15
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 79 2e-14
Medtr1g102425.1 | GUCT (NUC152) domain protein | HC | chr1:46259... 77 4e-14
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 75 3e-13
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 72 3e-12
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 67 4e-11
Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative ... 66 1e-10
Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative ... 66 1e-10
Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative ... 64 4e-10
Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative ... 64 4e-10
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 62 2e-09
Medtr1g015150.1 | DEAD-box ATP-dependent RNA helicase, putative ... 59 2e-08
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 58 4e-08
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 58 4e-08
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 58 5e-08
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 57 5e-08
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 57 5e-08
Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein... 57 7e-08
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 56 1e-07
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 55 2e-07
Medtr1g103260.1 | fanconi anemia, complementation group M protei... 54 8e-07
Medtr3g105390.1 | endoribonuclease dicer-like protein | HC | chr... 52 2e-06
Medtr6g040070.1 | DEAD/DEAH-box helicase | HC | chr6:14397151-14... 50 6e-06
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/387 (62%), Positives = 300/387 (77%), Gaps = 3/387 (0%)
Query: 87 ADGYDLAPPTTVSNDE-LDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIA 145
A+ + P+ ++DE L+I+KLG+ ++V +L +GIT LFPIQRAVL PA++G+D+I
Sbjct: 63 AEAFPFEEPSKSNSDEGLEIAKLGISQDIVSALEKKGITKLFPIQRAVLEPAMQGRDMIG 122
Query: 146 RAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPY 205
RA+TGTGKTLAFGIPI+ + + R G+ P ALVLAPTRELAKQVEKE E+AP
Sbjct: 123 RARTGTGKTLAFGIPIMDKIIQFNAKHGR--GKDPLALVLAPTRELAKQVEKEFYEAAPN 180
Query: 206 LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLA 265
L T+CVYGG + Q L GVD+ VGTPGRIIDL+N +L L EVQ+++LDEADQML
Sbjct: 181 LDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQ 240
Query: 266 VGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIK 325
VGF+EDVE IL+ +P RQT++FSATMP W+K+L+R YL PLTIDLVG+ ++KLA GI
Sbjct: 241 VGFQEDVEKILERLPAERQTLMFSATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGIS 300
Query: 326 LYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQ 385
LY++ + K ++ L+ +AKGGK IVFT+TK+DAD +S ++ SI EALHGDISQ
Sbjct: 301 LYSILSDAYVKAGIIVPLIKEHAKGGKCIVFTQTKRDADRISHGMSKSIPCEALHGDISQ 360
Query: 386 HQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 445
QRERTL GFR G F VLVATDVASRGLDIPNVDLVIHYELPN+ E FVHRSGRTGRAGK
Sbjct: 361 IQRERTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGK 420
Query: 446 EGTAILMYTSNQRRTVRSLEHDVGCKF 472
+GTAIL+YT +Q RT+R++E DVGCKF
Sbjct: 421 KGTAILVYTQDQSRTLRTIERDVGCKF 447
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/378 (63%), Positives = 301/378 (79%), Gaps = 5/378 (1%)
Query: 98 VSNDE-LDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLA 156
V+ DE L+I+KLG+ E+V +L +GI LFPIQRAVL PA++G+D+I RA+TGTGKTLA
Sbjct: 83 VNGDEGLEIAKLGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 142
Query: 157 FGIPII-KGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGV 215
FGIPI+ K + ++++ +RR P ALVLAPTRELA+QVEKE K++AP L + +YGG+
Sbjct: 143 FGIPILDKIIKFNAKNGKRRD---PLALVLAPTRELARQVEKEFKDAAPNLEIISLYGGM 199
Query: 216 AYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETI 275
Q + L GVD+VVGTPGR+IDL+ SL+L +V Y+VLDEADQML VGF+E VETI
Sbjct: 200 PIQQQISKLGSGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETI 259
Query: 276 LQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS 335
LQ +P+ RQT++FSATMP W+K L+R YLNKPLTIDLVG+ ++KLA GI LY++++ S
Sbjct: 260 LQKLPSKRQTLMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYS 319
Query: 336 KRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGF 395
K +L L+T +AKGGK IVFT+TK+DAD +S + SI EALHGDISQ QRERTL GF
Sbjct: 320 KAGILVPLITEHAKGGKCIVFTQTKRDADRLSHIMAKSIKCEALHGDISQTQRERTLTGF 379
Query: 396 RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
R F VLVATDVASRGLDIPNVDLVIHYELPN+ E FVHRSGRTGRAGK+GTAIL++T
Sbjct: 380 RNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTE 439
Query: 456 NQRRTVRSLEHDVGCKFE 473
NQ R V+++E DVGCKF+
Sbjct: 440 NQSRDVKTIERDVGCKFK 457
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/378 (63%), Positives = 301/378 (79%), Gaps = 5/378 (1%)
Query: 98 VSNDE-LDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLA 156
V+ DE L+I+KLG+ E+V +L +GI LFPIQRAVL PA++G+D+I RA+TGTGKTLA
Sbjct: 83 VNGDEGLEIAKLGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 142
Query: 157 FGIPII-KGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGV 215
FGIPI+ K + ++++ +RR P ALVLAPTRELA+QVEKE K++AP L + +YGG+
Sbjct: 143 FGIPILDKIIKFNAKNGKRRD---PLALVLAPTRELARQVEKEFKDAAPNLEIISLYGGM 199
Query: 216 AYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETI 275
Q + L GVD+VVGTPGR+IDL+ SL+L +V Y+VLDEADQML VGF+E VETI
Sbjct: 200 PIQQQISKLGSGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETI 259
Query: 276 LQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS 335
LQ +P+ RQT++FSATMP W+K L+R YLNKPLTIDLVG+ ++KLA GI LY++++ S
Sbjct: 260 LQKLPSKRQTLMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYS 319
Query: 336 KRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGF 395
K +L L+T +AKGGK IVFT+TK+DAD +S + SI EALHGDISQ QRERTL GF
Sbjct: 320 KAGILVPLITEHAKGGKCIVFTQTKRDADRLSHIMAKSIKCEALHGDISQTQRERTLTGF 379
Query: 396 RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
R F VLVATDVASRGLDIPNVDLVIHYELPN+ E FVHRSGRTGRAGK+GTAIL++T
Sbjct: 380 RNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTE 439
Query: 456 NQRRTVRSLEHDVGCKFE 473
NQ R V+++E DVGCKF+
Sbjct: 440 NQSRDVKTIERDVGCKFK 457
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 340 bits (872), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 212/544 (38%), Positives = 313/544 (57%), Gaps = 26/544 (4%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
+S + L L I +LFPIQ L+G D++ RA+TG GKTLAF +PI++
Sbjct: 104 VSNFRISEPLRMKLKENKIEALFPIQAMTFNTILDGSDLVGRARTGQGKTLAFVLPILES 163
Query: 165 VTDDSQSPQRRSG--RLPKALVLAPTRELAKQV--EKEIKESAPYLSTVCVYGGVAYATQ 220
+T+ R++G R+P +VL PTRELA QV + E+ S+ LS VYGG Y Q
Sbjct: 164 LTNGPAKSVRKTGYGRVPSVIVLLPTRELANQVYADFELYGSSLGLSACAVYGGAPYGAQ 223
Query: 221 QNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVP 280
+ L RGVD+V+GTPGRI D + ++ L+ +++ VLDEAD+ML +GF +DVE IL V
Sbjct: 224 ETKLRRGVDIVIGTPGRIKDHIERGNIDLSHLKFRVLDEADEMLRMGFVDDVELILGKVQ 283
Query: 281 --TGRQTMLFSATMPGWVKKLSRKYL-NKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKR 337
T QT+LFSAT+P WVK++S K+L + T DLVG ++ K + ++ + ++ ++
Sbjct: 284 DVTKVQTLLFSATLPSWVKQISTKFLKSDKKTADLVGNEKMKASTNVRHIILPCSSTARA 343
Query: 338 TMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQ 397
++ D++ Y+ GG+TI+F K+ A E++ L + ALHGDI Q QRE TL GFR
Sbjct: 344 QLIPDIIRCYSSGGRTIIFAEKKESASELAGLLP---GARALHGDIQQSQREITLKGFRS 400
Query: 398 GKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQ 457
GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTGRAG G A+++Y +
Sbjct: 401 GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP-R 459
Query: 458 RRTVRSLEHDVGCKFEFVSPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEER 517
R + +E + G KFE VS P EI ++ ++ V + F + A++L+
Sbjct: 460 RSNIAKIEREAGIKFEHVSAPQPDEIAKAMGGDAAEMITDVSDSVIPAFKSAAEQLLNNS 519
Query: 518 GTS---VLAAALAQLSGFSRPPSSRSLINQEQGCITLQLTRDLDALHGKYLSARSVTGFL 574
G S +LA ALA+ G++ +RSL+ +G +TL L GK + S
Sbjct: 520 GLSAVELLAKALAKAVGYTE-VKNRSLLTSMEGYVTLILE------GGKPMFTPSFAFGT 572
Query: 575 SDVYSP--AADEVGKIHLIADERVQGAVFDLP-EDISRELLKKDIPPGNTISLITKLPAL 631
+ P D V + L AD GAVFD+P +D+ L + ++ + +LP+L
Sbjct: 573 LRRFVPEDKVDAVQGLALTADG--LGAVFDVPAKDLDIFLSSQKNAVNVSLKVAKELPSL 630
Query: 632 QDDE 635
Q E
Sbjct: 631 QQRE 634
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 333 bits (854), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 315/555 (56%), Gaps = 38/555 (6%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
ISK + L L +GI SLFPIQ L+G D++ RA+TG GKTLAF +PI++
Sbjct: 45 ISKFKISEPLREKLKEKGIESLFPIQAMTFDIILQGCDLVGRARTGQGKTLAFVLPILES 104
Query: 165 VTD-------------DSQSPQRRSGRL-----PKALVLAPTRELAKQVEK--EIKESAP 204
VT+ + + + R G P LVL PTRELA QV E+ A
Sbjct: 105 VTNGKAKETNAKTKETNGNARESRKGGYGGPPKPSVLVLLPTRELACQVNADFEVYGGAM 164
Query: 205 YLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML 264
L++ C+YGG Y Q+ L RGVD+V+GTPGRI D + S+ L+++++ VLDEAD+ML
Sbjct: 165 GLTSCCLYGGAPYKAQEIKLERGVDIVIGTPGRIKDHIVRGSIDLSQLKFRVLDEADEML 224
Query: 265 AVGFEEDVETILQTVPT--GRQTMLFSATMPGWVKKLSRKYLNK-PLTIDLVGEDEEKLA 321
+GF EDVE IL V QT+LFSAT+P WVK +++++L + T DLVG + K +
Sbjct: 225 RMGFVEDVELILGKVKNVDQVQTLLFSATLPEWVKNIAKRFLKEDKQTADLVGNTKMKAS 284
Query: 322 HGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHG 381
++ Y + T ++ ++ D++ Y+ G+TI+FT TK+ A +++ L + ALHG
Sbjct: 285 TSVRHYILPCTGAARSQLIPDIIRCYSSEGRTIIFTETKESASQLAELLP---GARALHG 341
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
DI Q QRE TL+GFR GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTG
Sbjct: 342 DIQQAQREVTLSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTG 401
Query: 442 RAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEILESSAEQVVAALSRVHPE 501
RAG G A+++Y +R + +E + G KFE +S P +I ++ + + +V
Sbjct: 402 RAGNTGVAVMLYDP-RRSNIPKIERESGVKFEHISAPQANDIAKAVGREAAEMIMQVSDS 460
Query: 502 SVEFFTATAQKLVEERGTSVL---AAALAQLSGFSRPPSSRSLINQEQGCITLQLTRDLD 558
+ F + A++L+ G SV+ A ALA+ G++ RSL++ + +TL L +
Sbjct: 461 VIPAFKSAAEELLNNSGLSVVDLFAKALAKAVGYTE-IKKRSLLSSMENYVTLLLENE-K 518
Query: 559 ALHGKYLSARSVTGFLSDVYSPAADEVGKIHLIADERVQGAVFDL-PEDISRELLKKDIP 617
+ + + + FL + + V + + AD G VFD+ ED+ L K+
Sbjct: 519 PIFTPTFAYKILRRFLPE---EKVEAVKGLTITADG--NGVVFDVAAEDLDTYLAGKENV 573
Query: 618 PGNTISLITKLPALQ 632
+ ++ +LP LQ
Sbjct: 574 SDVRLEVLKELPRLQ 588
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 259 bits (661), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 217/375 (57%), Gaps = 16/375 (4%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
+V A G ++ PP + G P E+++ + + G ++ PIQ AL+G+DI
Sbjct: 482 EVTASGDNIPPPF------MTFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDI 535
Query: 144 IARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRL--PKALVLAPTRELAKQVEKEIKE 201
+A AKTG+GKTL + +P + QRR+ L P LVLAPTRELA Q+++E+ +
Sbjct: 536 VAIAKTGSGKTLGYLMPAFILLR------QRRNNSLNGPTVLVLAPTRELATQIQEEVFK 589
Query: 202 SA--PYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDE 259
A +S C+YGG A Q L RG D+VV TPGR+ D++ + +V LVLDE
Sbjct: 590 FARSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDE 649
Query: 260 ADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEK 319
AD+ML +GFE + I+ +P RQT++++AT P V+K++ L P+ +++ DE
Sbjct: 650 ADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNVDELA 709
Query: 320 LAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEAL 379
I Y K+ L ++ +G K I+F TKK D+++ S+ + + A+
Sbjct: 710 ANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAI 769
Query: 380 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 439
HGD SQ +R+ L FR GK +LVATDVA+RGLDI ++ +VI+Y+ PN E +VHR GR
Sbjct: 770 HGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGR 829
Query: 440 TGRAGKEGTAILMYT 454
TGRAG G A ++
Sbjct: 830 TGRAGATGVAYTFFS 844
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 259 bits (661), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 217/375 (57%), Gaps = 16/375 (4%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
+V A G ++ PP + G P E+++ + + G ++ PIQ AL+G+DI
Sbjct: 482 EVTASGDNIPPPF------MTFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDI 535
Query: 144 IARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRL--PKALVLAPTRELAKQVEKEIKE 201
+A AKTG+GKTL + +P + QRR+ L P LVLAPTRELA Q+++E+ +
Sbjct: 536 VAIAKTGSGKTLGYLMPAFILLR------QRRNNSLNGPTVLVLAPTRELATQIQEEVFK 589
Query: 202 SA--PYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDE 259
A +S C+YGG A Q L RG D+VV TPGR+ D++ + +V LVLDE
Sbjct: 590 FARSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDE 649
Query: 260 ADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEK 319
AD+ML +GFE + I+ +P RQT++++AT P V+K++ L P+ +++ DE
Sbjct: 650 ADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNVDELA 709
Query: 320 LAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEAL 379
I Y K+ L ++ +G K I+F TKK D+++ S+ + + A+
Sbjct: 710 ANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAI 769
Query: 380 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 439
HGD SQ +R+ L FR GK +LVATDVA+RGLDI ++ +VI+Y+ PN E +VHR GR
Sbjct: 770 HGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGR 829
Query: 440 TGRAGKEGTAILMYT 454
TGRAG G A ++
Sbjct: 830 TGRAGATGVAYTFFS 844
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 251 bits (641), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 225/403 (55%), Gaps = 13/403 (3%)
Query: 65 TPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGIT 124
+P+ +T E + ++ +G D+ P +D P ++ + G
Sbjct: 63 SPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDA------AFPDYVLEEVKKAGFV 116
Query: 125 SLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALV 184
PIQ AL+G+D+I A+TG+GKTLA+ +P I V + P G P LV
Sbjct: 117 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHV---NAQPILDPGDGPIVLV 173
Query: 185 LAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLV 242
LAPTRELA Q+++E + ++ + + C+YGGV Q L +GV++++ TPGR+ID++
Sbjct: 174 LAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDML 233
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
N L V YLVLDEAD+ML +GF+ + I+ + RQT+ +SAT P V++L+R+
Sbjct: 234 ESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQ 293
Query: 303 YLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKD 362
+L P + ++G ++ K H IK Y K L L+ G + ++F TKK
Sbjct: 294 FLYNPYKV-IIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKG 352
Query: 363 ADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLV 421
D+++ L + + ++HGD SQ +R+ L+ F+ GK ++ ATDVA+RGLD+ +V V
Sbjct: 353 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYV 412
Query: 422 IHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
I+Y+ P E +VHR GRTGRAG +GTA +T+ R + L
Sbjct: 413 INYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKEL 455
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 250 bits (638), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 214/372 (57%), Gaps = 12/372 (3%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
++ G ++ PP T + G PSE++R + N G ++ PIQ AL+ KDI
Sbjct: 151 EITVTGDNVPPPVT------SFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDI 204
Query: 144 IARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKE-IKES 202
+A AKTG+GKTL + +P + + + + P LVL+PTRELA Q++ E +K S
Sbjct: 205 VAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMG----PTVLVLSPTRELATQIQDEAVKFS 260
Query: 203 -APYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEAD 261
++ C+YGG Q + RG D+VV TPGR+ D++ + L +V YLVLDEAD
Sbjct: 261 KTSRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEAD 320
Query: 262 QMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA 321
+ML +GFE + I+ VP RQT++F+AT P V++++ L P+ +++ DE
Sbjct: 321 RMLDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVAN 380
Query: 322 HGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHG 381
I + T K+ L ++ +G K I+F TKK D+++ +LT + A+HG
Sbjct: 381 KSITQHIEVLTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHG 440
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
D SQ R+ LN FR G+ VLVATDVA+RGLD+ ++ +V++++ P E +VHR GRTG
Sbjct: 441 DKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTG 500
Query: 442 RAGKEGTAILMY 453
RAG G A +
Sbjct: 501 RAGATGIAYTFF 512
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 250 bits (638), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 214/372 (57%), Gaps = 12/372 (3%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
++ G ++ PP T + G PSE++R + N G ++ PIQ AL+ KDI
Sbjct: 151 EITVTGDNVPPPVT------SFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDI 204
Query: 144 IARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKE-IKES 202
+A AKTG+GKTL + +P + + + + P LVL+PTRELA Q++ E +K S
Sbjct: 205 VAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMG----PTVLVLSPTRELATQIQDEAVKFS 260
Query: 203 -APYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEAD 261
++ C+YGG Q + RG D+VV TPGR+ D++ + L +V YLVLDEAD
Sbjct: 261 KTSRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEAD 320
Query: 262 QMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA 321
+ML +GFE + I+ VP RQT++F+AT P V++++ L P+ +++ DE
Sbjct: 321 RMLDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVAN 380
Query: 322 HGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHG 381
I + T K+ L ++ +G K I+F TKK D+++ +LT + A+HG
Sbjct: 381 KSITQHIEVLTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHG 440
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
D SQ R+ LN FR G+ VLVATDVA+RGLD+ ++ +V++++ P E +VHR GRTG
Sbjct: 441 DKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTG 500
Query: 442 RAGKEGTAILMY 453
RAG G A +
Sbjct: 501 RAGATGIAYTFF 512
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 247 bits (630), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 224/390 (57%), Gaps = 42/390 (10%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGR-----LPKA 182
P+QR + +L G+D++A A+TG+GKT AF PII G+ + P +R R P A
Sbjct: 169 PVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIM--TGQPAQRPPRGVRTVCPLA 226
Query: 183 LVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
LVL+PTREL+ Q+ +E ++ + + V YGG Q L RGVD++V TPGR++D
Sbjct: 227 LVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVD 286
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV---PTG-RQTMLFSATMPGWV 296
L+ + L+ ++YL LDEAD+ML +GFE + I++ + P G RQTMLFSAT P +
Sbjct: 287 LLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEI 346
Query: 297 KKLSRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVT------VYA 348
++L+ +L+ L + VG + + ++ S KR+ L DL+ V
Sbjct: 347 QRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQES----DKRSHLMDLLHAQRANGVQG 402
Query: 349 KGGKTIVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATD 407
K T+VF TKK AD + L N+ + +HGD SQ +RE L F+ G +LVATD
Sbjct: 403 KQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATD 462
Query: 408 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHD 467
VA+RGLDIP+V V++++LPND + +VHR GRTGRAGK+G A + N RSL
Sbjct: 463 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSL--- 519
Query: 468 VGCKFEFVSPPATQEILESSAEQVVAALSR 497
Q++++ + ++V A LSR
Sbjct: 520 -------------QDLMQEANQEVPAWLSR 536
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 247 bits (630), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 224/390 (57%), Gaps = 42/390 (10%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGR-----LPKA 182
P+QR + +L G+D++A A+TG+GKT AF PII G+ + P +R R P A
Sbjct: 169 PVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIM--TGQPAQRPPRGVRTVCPLA 226
Query: 183 LVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
LVL+PTREL+ Q+ +E ++ + + V YGG Q L RGVD++V TPGR++D
Sbjct: 227 LVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVD 286
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV---PTG-RQTMLFSATMPGWV 296
L+ + L+ ++YL LDEAD+ML +GFE + I++ + P G RQTMLFSAT P +
Sbjct: 287 LLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEI 346
Query: 297 KKLSRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVT------VYA 348
++L+ +L+ L + VG + + ++ S KR+ L DL+ V
Sbjct: 347 QRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQES----DKRSHLMDLLHAQRANGVQG 402
Query: 349 KGGKTIVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATD 407
K T+VF TKK AD + L N+ + +HGD SQ +RE L F+ G +LVATD
Sbjct: 403 KQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATD 462
Query: 408 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHD 467
VA+RGLDIP+V V++++LPND + +VHR GRTGRAGK+G A + N RSL
Sbjct: 463 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSL--- 519
Query: 468 VGCKFEFVSPPATQEILESSAEQVVAALSR 497
Q++++ + ++V A LSR
Sbjct: 520 -------------QDLMQEANQEVPAWLSR 536
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 243 bits (619), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 224/418 (53%), Gaps = 13/418 (3%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
V +P ++ ++ + A D+ +G+D+ P ++ P + + G
Sbjct: 167 VESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEA------NFPDYCLDVIAKLG 220
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
PIQ AL G+D+I A+TG+GKTL++ +P I V S P+ G P
Sbjct: 221 FVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV---SAQPRLVQGEGPVV 277
Query: 183 LVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
LVLAPTRELA Q+++E + S + C+YGG Q L GV++V+ TPGR+ID
Sbjct: 278 LVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLID 337
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
++ L V YLVLDEAD+ML +GFE + I+ + RQT+ +SAT P V+ L+
Sbjct: 338 MLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLA 397
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
R++L+ P + ++G K I T K L L+ G + ++FT TK
Sbjct: 398 RQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETK 456
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
K D+V+ L + + ++HGD +Q +R+ L F+ G+ ++ ATDVA+RGLD+ ++
Sbjct: 457 KGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIK 516
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSP 477
V++Y+ P+ E +VHR GRTGRAG +GTA +TS + R L + + VSP
Sbjct: 517 CVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSANAKYARDLIKILQDAGQIVSP 574
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 232/421 (55%), Gaps = 41/421 (9%)
Query: 68 SSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
+ V+ EA++ + V A G ++ PP + ++ L +L ++
Sbjct: 113 NGVVANFEAYESIP---VEATGENVPPPVNL------FAETELHEDLKNNIERCKYVKPT 163
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPK------ 181
P+QR + A+ G+D++A A+TG+GKT AF PII G+ + + SG LP+
Sbjct: 164 PVQRYAIPIAVAGRDLMACAQTGSGKTAAFCFPIISGIMKERLA----SGLLPRGGGVDS 219
Query: 182 ------ALVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVG 233
AL+L+PTREL+ Q+ E + A + VYGG Q L RGVD++V
Sbjct: 220 DVAFPTALILSPTRELSCQIHAEACKFAHQTGVKIAVVYGGAPIGQQLRILERGVDILVA 279
Query: 234 TPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV----PTGRQTMLFS 289
TPGR++DL+ + L +++YL LDEAD+ML +GFE + I+Q + P RQT+LFS
Sbjct: 280 TPGRLVDLIERERVSLKKIKYLALDEADRMLDMGFEHQIRNIVQQMHMPPPGDRQTLLFS 339
Query: 290 ATMPGWVKKLSRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
AT P ++KL+ +L+ L + VG E + I+ S KRT L DL+
Sbjct: 340 ATFPDNIQKLASDFLSNYVFLAVGRVGSSTELIVQKIE----SVQDMEKRTRLVDLLRRN 395
Query: 348 AKGGK---TIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVL 403
GK T+VF TKK AD + L + + A+HGD Q +RER L F++G ++
Sbjct: 396 VVNGKLALTLVFVETKKGADALENWLCRINFPAIAIHGDKVQMERERALRSFKRGLTPIM 455
Query: 404 VATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRS 463
VATDVASRGLDIP+V VI+++LP D + +VHR GRTGRAG+ G A +++ +S
Sbjct: 456 VATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSGLATAFFSTKNMPMAKS 515
Query: 464 L 464
L
Sbjct: 516 L 516
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 240 bits (612), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 223/403 (55%), Gaps = 29/403 (7%)
Query: 81 ALDD--VNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPAL 138
A DD V G ++ PP +++ L L +++ P+QR + +L
Sbjct: 135 AYDDIPVETSGENVPPPVNT------FAEIDLGDALNQNIKRCKYVKPTPVQRYAIPISL 188
Query: 139 EGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGR--LPKALVLAPTRELAKQVE 196
G+D++A A+TG+GKT AF PII G+ + + + R R P AL+L+PTREL+ Q+
Sbjct: 189 AGRDLMACAQTGSGKTAAFCFPIISGILTEQYAQRPRVARTAYPLALILSPTRELSCQIH 248
Query: 197 KEIKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQY 254
E K+ + + V YGG Q L RGVD++V TPGR++DL+ + L ++Y
Sbjct: 249 DEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRY 308
Query: 255 LVLDEADQMLAVGFEEDVETILQTV----PTGRQTMLFSATMPGWVKKLSRKYLNKP--L 308
L LDEAD+ML +GFE + I++ + P RQT+LFSAT P +++L+ +L L
Sbjct: 309 LALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQRLASDFLASYIFL 368
Query: 309 TIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLV------TVYAKGGKTIVFTRTKKD 362
+ VG + +A ++ S KR+ L DL+ V K G T+VF TKK
Sbjct: 369 AVGRVGSSTDLIAQRVEYVLES----DKRSHLMDLLHAQRENDVNGKQGLTLVFVETKKG 424
Query: 363 ADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLV 421
AD + L N + +HGD +Q +RE+ L F+ G +LVATDVA+RGLDIP V V
Sbjct: 425 ADALEHCLCVNGFPATCIHGDRTQQEREQALRSFKTGNTPILVATDVAARGLDIPRVAHV 484
Query: 422 IHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
++++LPND + +VHR GRTGRAGK G A + + + L
Sbjct: 485 VNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNDSNLSMAKPL 527
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 221/408 (54%), Gaps = 28/408 (6%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
DV LA P + + + + L +++ + T IQ + AL G+D+
Sbjct: 101 DVTVSSDSLAAPAPIES----FNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDL 156
Query: 144 IARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIK--- 200
+ A+TG+GKT AF IP+I+ +Q P RR G P ALVLAPTRELA+Q+EKE++
Sbjct: 157 LGCAETGSGKTAAFTIPMIQHCL--AQPPIRR-GDGPLALVLAPTRELAQQIEKEVQAFS 213
Query: 201 ESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEA 260
S T V GG Q++ L GV++ V TPGR ID + + L+ + Y+VLDEA
Sbjct: 214 RSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEA 273
Query: 261 DQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKL 320
D+ML +GFE + I++++P QT+LFSATMP ++ LS++YL P+ + VG+
Sbjct: 274 DRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASPVQVK-VGKVSSPT 332
Query: 321 AHGIKLYAVSATTNSKRTMLSDLVTVYAKGGK--------TIVFTRTKKDADEVSLSL-T 371
+ + V + N K L DL+ A + TIVF K DEV+ +L
Sbjct: 333 TN-VSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIA 391
Query: 372 NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPE 431
+++ +LHG SQ +RE L+ FR ++LVATDVASRGLD+ V VI+ +LP E
Sbjct: 392 QGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTE 451
Query: 432 TFVHRSGRTGRAGKEGTAILMYT-------SNQRRTVRSLEHDVGCKF 472
++HR GRTGRAG G A YT SN R+ + E F
Sbjct: 452 DYIHRIGRTGRAGSTGIATSFYTDRDMFLVSNIRKAIADAESGNAVAF 499
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 206/363 (56%), Gaps = 24/363 (6%)
Query: 129 IQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPT 188
IQ + AL G+D++ A+TG+GKT AF IP+I+ +Q P RR G P ALVLAPT
Sbjct: 111 IQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCL--AQPPIRR-GDGPLALVLAPT 167
Query: 189 RELAKQVEKEIK---ESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGN 245
RELA+Q+EKE++ S T V GG Q++ L GV++ V TPGR ID +
Sbjct: 168 RELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQG 227
Query: 246 SLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLN 305
+ L+ + Y+VLDEAD+ML +GFE + I++++P QT+LFSATMP ++ LS++YL
Sbjct: 228 NTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLA 287
Query: 306 KPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGK--------TIVFT 357
P+ + VG+ + + V + N K L DL+ A + TIVF
Sbjct: 288 SPVQVK-VGKVSSPTTN-VSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFV 345
Query: 358 RTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 416
K DEV+ +L +++ +LHG SQ +RE L+ FR ++LVATDVASRGLD+
Sbjct: 346 ERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVT 405
Query: 417 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT-------SNQRRTVRSLEHDVG 469
V VI+ +LP E ++HR GRTGRAG G A YT SN R+ + E
Sbjct: 406 GVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVSNIRKAIADAESGNA 465
Query: 470 CKF 472
F
Sbjct: 466 VAF 468
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 205/352 (58%), Gaps = 9/352 (2%)
Query: 109 GLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDD 168
GLP ++ +G PIQ L+G+D+I A TG+GKTLAFGIP I V +
Sbjct: 109 GLPENVLECC--KGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNK 166
Query: 169 SQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALSR 226
+S GR P L+L+PTRELA+Q+ + ++ + +VC+YGG Q +AL
Sbjct: 167 RKSKGSSKGRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPKGAQISALKS 226
Query: 227 GVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTM 286
G+D+V+GTPGRI DLV RL EV ++VLDEAD+ML +GFE+ V +IL + RQ +
Sbjct: 227 GIDIVIGTPGRIQDLVEMGICRLQEVSFVVLDEADRMLDMGFEQIVRSILGQTCSARQMV 286
Query: 287 LFSATMPGWVKKLSRKYLN-KPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVT 345
+FSAT P V L++++++ P+ + +VG ++ H + + L L+
Sbjct: 287 MFSATWPLAVHHLAQEFMDPNPVKV-VVGSEDLSANHDVMQIVEVLDERLRDKRLLALLE 345
Query: 346 VYAKGGKT--IVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTV 402
Y K K +VF K + V L + ++ GD SQH+R + L+ F+ G +
Sbjct: 346 KYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGSCPL 405
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT 454
++ATDVA+RGLDIP+V++VI++ P E +VHR GRTGRAGK+G A +T
Sbjct: 406 MIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFT 457
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 210/367 (57%), Gaps = 25/367 (6%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R + G IQ+ +VP ++G D+I +A++GTGKT F I++ +
Sbjct: 45 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDY 104
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
Q ALVLAPTRELA+Q+EK ++ YL CV GG + Q L
Sbjct: 105 SVTECQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 155
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
S GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P+ Q
Sbjct: 156 SSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQ 215
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDL 343
+FSATMP +++RK++NKP+ I LV DE L GIK + V+ K L DL
Sbjct: 216 VGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTL-EGIKQFYVNVDKEEWKLDTLCDL 273
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQG 398
A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 274 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 328
Query: 399 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
VL+ TD+ +RG+D+ V LVI+Y+LP PE ++HR GR+GR G++G AI T++
Sbjct: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDE 388
Query: 459 RTVRSLE 465
R + ++
Sbjct: 389 RMLSDIQ 395
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 226 bits (576), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 204/367 (55%), Gaps = 27/367 (7%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL++++ G + PIQ A + L+ +D+I A+TG+GKT AF +P++ +T
Sbjct: 293 LSQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 352
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYL--STVCVYGGVAYATQQNALSRG 227
+ P A+V+APTRELA+Q+E E + A Y+ V + GG + Q + +G
Sbjct: 353 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 412
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTG----- 282
++V+ TPGR+ID + L + Y+VLDEAD+M+ +GFE V +L +P+
Sbjct: 413 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 472
Query: 283 ------------RQTMLFSATMPGWVKKLSRKYLNKPL--TIDLVGEDEEKLAHGIKLYA 328
R T +FSATMP V++L+RKYL P+ TI G+ + ++ + +
Sbjct: 473 NEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 532
Query: 329 VSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNS-IASEALHGDISQHQ 387
S + +L +L A IVF TKK AD ++ +L LHG SQ Q
Sbjct: 533 ESEKNYKLQRLLDELNDKTA-----IVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQ 587
Query: 388 RERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 447
RE +L GFR ++ VLVATDVA RG+DIP+V VI+Y++P + E + HR GRTGRAGK G
Sbjct: 588 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 647
Query: 448 TAILMYT 454
A T
Sbjct: 648 VATTFLT 654
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 248/477 (51%), Gaps = 35/477 (7%)
Query: 69 SVLTAEE-AFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLF 127
S +T EE AF L+ + G D+ P N + GL S+++ ++
Sbjct: 475 SKMTVEEVAFYRKQLE-LKIHGKDVPKPVKSWN------QTGLTSKILDTIKKANFEKPM 527
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ L + G+D I AKTG+GKTLAF +P+++ + D P G P L++AP
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKD---QPPVVVGDGPIGLIMAP 584
Query: 188 TRELAKQVEKEIKESAPYLSTVCV--YGGVAYATQQNALSRGVDVVVGTPGRIIDLV--- 242
TREL +Q+ +I++ + CV YGG A Q + L RG ++VV TPGR+ID++
Sbjct: 585 TRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 644
Query: 243 NGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRK 302
+G L V YLV+DEAD+M +GFE + I+Q + RQT+LFSAT P V+ L+RK
Sbjct: 645 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK 704
Query: 303 YLNKPLTIDLVGED--EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
LNKP+ I + G + +A +++ N + L +L+ + + GK +VF ++
Sbjct: 705 VLNKPVEIQVGGRSVVNKDIAQLVEVRP----ENERFLRLLELLGEWYEKGKILVFVHSQ 760
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVD 419
D + L + +LHG Q RE T++ F+ +LVAT +A+RGLD+ ++
Sbjct: 761 DKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELE 820
Query: 420 LVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRT----VRSLEHDVGCKFEFV 475
LVI++++PN E +VHR GRTGRAG++G AI + R V++LE E +
Sbjct: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALELS-----EQI 875
Query: 476 SPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVEERGTSVLAAALAQLSGF 532
P + + E +V L + H + T K EE AA AQ +
Sbjct: 876 VPDDLKSLAEGFMAKVTQGLEQAHGTG---YGGTGFKFNEEEDEVRRAAKKAQAKEY 929
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 204/366 (55%), Gaps = 27/366 (7%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L E+++++ G + PIQ A + L+ +D+I A+TG+GKT AF +P++ +T
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYL--STVCVYGGVAYATQQNALSRG 227
+ P A+V+APTRELA+Q+E E + A Y+ V + GG + Q + +G
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTG----- 282
++V+ TPGR+ID + L + Y+VLDEAD+M+ +GFE V +L +P+
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 283 ------------RQTMLFSATMPGWVKKLSRKYLNKPL--TIDLVGEDEEKLAHGIKLYA 328
R T +FSATMP V++L+RKYL P+ TI G+ + ++ + +
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 494
Query: 329 VSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQR 388
S + +L L A IVF TKK AD ++ +L + LHG SQ QR
Sbjct: 495 ESEKNYNLHRLLDQLNDKTA-----IVFVNTKKSADFLAKNLEGYRVT-TLHGGKSQDQR 548
Query: 389 ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGT 448
E +L GFR ++ VLVATDVA RG+DIP+V VI+Y++P + E + HR GRTGRAGK G
Sbjct: 549 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 608
Query: 449 AILMYT 454
A T
Sbjct: 609 ATTFLT 614
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 204/366 (55%), Gaps = 27/366 (7%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L E+++++ G + PIQ A + L+ +D+I A+TG+GKT AF +P++ +T
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYL--STVCVYGGVAYATQQNALSRG 227
+ P A+V+APTRELA+Q+E E + A Y+ V + GG + Q + +G
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTG----- 282
++V+ TPGR+ID + L + Y+VLDEAD+M+ +GFE V +L +P+
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 283 ------------RQTMLFSATMPGWVKKLSRKYLNKPL--TIDLVGEDEEKLAHGIKLYA 328
R T +FSATMP V++L+RKYL P+ TI G+ + ++ + +
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 494
Query: 329 VSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQR 388
S + +L L A IVF TKK AD ++ +L + LHG SQ QR
Sbjct: 495 ESEKNYNLHRLLDQLNDKTA-----IVFVNTKKSADFLAKNLEGYRVT-TLHGGKSQDQR 548
Query: 389 ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGT 448
E +L GFR ++ VLVATDVA RG+DIP+V VI+Y++P + E + HR GRTGRAGK G
Sbjct: 549 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 608
Query: 449 AILMYT 454
A T
Sbjct: 609 ATTFLT 614
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 204/366 (55%), Gaps = 27/366 (7%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L E+++++ G + PIQ A + L+ +D+I A+TG+GKT AF +P++ +T
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYL--STVCVYGGVAYATQQNALSRG 227
+ P A+V+APTRELA+Q+E E + A Y+ V + GG + Q + +G
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQG 374
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTG----- 282
++V+ TPGR+ID + L + Y+VLDEAD+M+ +GFE V +L +P+
Sbjct: 375 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 434
Query: 283 ------------RQTMLFSATMPGWVKKLSRKYLNKPL--TIDLVGEDEEKLAHGIKLYA 328
R T +FSATMP V++L+RKYL P+ TI G+ + ++ + +
Sbjct: 435 NEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 494
Query: 329 VSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQR 388
S + +L L A IVF TKK AD ++ +L + LHG SQ QR
Sbjct: 495 ESEKNYNLHRLLDQLNDKTA-----IVFVNTKKSADFLAKNLEGYRVT-TLHGGKSQDQR 548
Query: 389 ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGT 448
E +L GFR ++ VLVATDVA RG+DIP+V VI+Y++P + E + HR GRTGRAGK G
Sbjct: 549 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 608
Query: 449 AILMYT 454
A T
Sbjct: 609 ATTFLT 614
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 224 bits (570), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 214/392 (54%), Gaps = 27/392 (6%)
Query: 83 DDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKD 142
D + ADG + D D +GL L+R + G IQ+ +VP +G D
Sbjct: 39 DLIAADGDEFWTSYDEVYDSFD--AMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 96
Query: 143 IIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKES 202
+I +A++GTGKT F +++ + + Q ALVLAPTRELA+Q+EK ++
Sbjct: 97 VIQQAQSGTGKTATFCSGVLQQLDYNVTQCQ--------ALVLAPTRELAQQIEKVMRAL 148
Query: 203 APYLST---VCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDE 259
YL CV GG + Q LS GV VVVGTPGR+ D++ SL ++ VLDE
Sbjct: 149 GDYLGVKVHACV-GGTSVREDQRILSTGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDE 207
Query: 260 ADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEK 319
AD+ML+ GF++ + I Q +P Q +FSATMP +++RK++NKP+ I LV DE
Sbjct: 208 ADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELT 266
Query: 320 LAHGIKLYAVSATTNS-KRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE- 377
L GIK + V+ K L DL A ++++F T++ D LT+ + S
Sbjct: 267 L-EGIKQFYVNVEKEEWKLDTLCDLYETLAI-TQSVIFVNTRRKVD----WLTDKMRSRD 320
Query: 378 ----ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETF 433
A HGD+ Q+ R+ + FR G VL+ TD+ +RG+D+ V LVI+++LP PE +
Sbjct: 321 HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENY 380
Query: 434 VHRSGRTGRAGKEGTAILMYTSNQRRTVRSLE 465
+HR GR+GR G++G AI T +R ++
Sbjct: 381 LHRIGRSGRFGRKGVAINFVTKEDEGMLRDIQ 412
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 223 bits (569), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 214/392 (54%), Gaps = 27/392 (6%)
Query: 83 DDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKD 142
D + ADG + D D +GL L+R + G IQ+ +VP +G D
Sbjct: 22 DLIAADGDEFWTSYDEVYDSFD--AMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 79
Query: 143 IIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKES 202
+I +A++GTGKT F +++ + + Q ALVLAPTRELA+Q+EK ++
Sbjct: 80 VIQQAQSGTGKTATFCSGVLQQLDYNVTQCQ--------ALVLAPTRELAQQIEKVMRAL 131
Query: 203 APYLST---VCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDE 259
YL CV GG + Q LS GV VVVGTPGR+ D++ SL ++ VLDE
Sbjct: 132 GDYLGVKVHACV-GGTSVREDQRILSTGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDE 190
Query: 260 ADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEK 319
AD+ML+ GF++ + I Q +P Q +FSATMP +++RK++NKP+ I LV DE
Sbjct: 191 ADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELT 249
Query: 320 LAHGIKLYAVSATTNS-KRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE- 377
L GIK + V+ K L DL A ++++F T++ D LT+ + S
Sbjct: 250 L-EGIKQFYVNVEKEEWKLDTLCDLYETLAI-TQSVIFVNTRRKVD----WLTDKMRSRD 303
Query: 378 ----ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETF 433
A HGD+ Q+ R+ + FR G VL+ TD+ +RG+D+ V LVI+++LP PE +
Sbjct: 304 HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENY 363
Query: 434 VHRSGRTGRAGKEGTAILMYTSNQRRTVRSLE 465
+HR GR+GR G++G AI T +R ++
Sbjct: 364 LHRIGRSGRFGRKGVAINFVTKEDEGMLRDIQ 395
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 205/363 (56%), Gaps = 17/363 (4%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R + G IQ+ +VP ++G D+I +A++GTGKT F I++ +
Sbjct: 45 MGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDY 104
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
Q ALVLAPTRELA+Q+EK ++ YL CV GG + Q L
Sbjct: 105 GLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 155
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P Q
Sbjct: 156 QTGVHVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 215
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDL 343
+FSATMP +++RK++NKP+ I LV DE L GIK + V+ K L DL
Sbjct: 216 VGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTL-EGIKQFYVNVDKEEWKLETLCDL 273
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIAS-EALHGDISQHQRERTLNGFRQGKFTV 402
A ++++F T++ D ++ + + A HGD+ Q+ R+ + FR G V
Sbjct: 274 YETLAI-TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 332
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVR 462
L+ TD+ +RG+D+ V LVI+Y+LP PE ++HR GR+GR G++G AI T R +
Sbjct: 333 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDARMLA 392
Query: 463 SLE 465
++
Sbjct: 393 DIQ 395
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 221 bits (562), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 205/363 (56%), Gaps = 17/363 (4%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R + G IQ+ +VP ++G D+I +A++GTGKT F I++ +
Sbjct: 29 MGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDY 88
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNAL 224
Q ALVLAPTRELA+Q+EK ++ YL CV GG + Q L
Sbjct: 89 GLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 139
Query: 225 SRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
GV VVVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P Q
Sbjct: 140 QTGVHVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 199
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSDL 343
+FSATMP +++RK++NKP+ I LV DE L GIK + V+ K L DL
Sbjct: 200 VGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTL-EGIKQFYVNVDKEEWKLETLCDL 257
Query: 344 VTVYAKGGKTIVFTRTKKDADEVSLSLTNSIAS-EALHGDISQHQRERTLNGFRQGKFTV 402
A ++++F T++ D ++ + + A HGD+ Q+ R+ + FR G V
Sbjct: 258 YETLAI-TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 316
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVR 462
L+ TD+ +RG+D+ V LVI+Y+LP PE ++HR GR+GR G++G AI T R +
Sbjct: 317 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLEDARMLA 376
Query: 463 SLE 465
++
Sbjct: 377 DIQ 379
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 206/381 (54%), Gaps = 18/381 (4%)
Query: 85 VNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDII 144
+ G+++ P D G +++ ++ +G IQ L L G+DII
Sbjct: 219 IRVSGFEVPKPVKTFED------CGFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDII 272
Query: 145 ARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAP 204
AKTG+GKT AF +P+I + D P+ + P ++ APTRELA Q+ E K+ A
Sbjct: 273 GIAKTGSGKTAAFVLPMIVHIMD---QPELQKEEGPIGVICAPTRELAHQIYLEAKKFAK 329
Query: 205 Y--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQ 262
+ VYGG++ Q L G ++VV TPGR+ID++ +L + YLVLDEAD+
Sbjct: 330 AYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALAMLRATYLVLDEADR 389
Query: 263 MLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPL--TIDLVGEDEEKL 320
M +GFE V +I+ + RQT+LFSATMP V+KL+R+ L+ P+ T+ VG E +
Sbjct: 390 MFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDI 449
Query: 321 AHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSL-TNSIASEAL 379
++ V + + K L + + G T+VF K DE+ + L AL
Sbjct: 450 TQVVQ---VIPSDSEKLPWLLEKLHEMIDQGDTLVFASKKATVDEIEVQLGQRGFKVAAL 506
Query: 380 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 439
HGD Q R L F+ G + VL+ATDVA+RGLDI ++ V+++++ D + VHR GR
Sbjct: 507 HGDKDQSSRMDILQKFKSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGR 566
Query: 440 TGRAG-KEGTAILMYTSNQRR 459
TGRAG K+G A + T + R
Sbjct: 567 TGRAGDKDGVAYTLITQKEAR 587
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 206/368 (55%), Gaps = 27/368 (7%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+GL L+R + G IQ+ +VP +G D+I +A++GTGKT F I++
Sbjct: 45 MGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ---- 100
Query: 168 DSQSPQRRSGRLP-KALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNA 223
Q G + +ALVLAPTRELA+Q+EK ++ +L CV GG + Q
Sbjct: 101 -----QLDYGLVQCQALVLAPTRELAQQIEKVMRALGDFLGVKVHACV-GGTSVREDQRI 154
Query: 224 LSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGR 283
L GV VVGTPGR+ D++ SLR ++ VLDEAD+ML+ GF++ + I Q +P
Sbjct: 155 LQAGVHTVVGTPGRVFDMLRRQSLRSECIKMFVLDEADEMLSRGFKDQIYDIFQQLPGKI 214
Query: 284 QTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSD 342
Q +FSATMP +++RK++NKP+ I LV DE L GIK + V+ K L D
Sbjct: 215 QVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTL-EGIKQFYVNVDKEEWKLETLCD 272
Query: 343 LVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQRERTLNGFRQ 397
L A ++++F T++ D LT+ + S A HGD+ Q+ R+ + FR
Sbjct: 273 LYETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS 327
Query: 398 GKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQ 457
G VL+ TD+ +RG+D+ V LVI+Y+LP PE ++HR GR+GR G++G +I T
Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTGED 387
Query: 458 RRTVRSLE 465
R + ++
Sbjct: 388 ARMLADIQ 395
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 216 bits (550), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 206/386 (53%), Gaps = 30/386 (7%)
Query: 100 NDELDISK-LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFG 158
N E+ K LGLP LV + G + IQ + PALEGKD+I AKTG+GKT AF
Sbjct: 5 NKEMKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFA 64
Query: 159 IPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVA 216
+PI+ + + + P A V++PTRELA Q+ ++ + + C + GG+
Sbjct: 65 LPILHALLE-APRPNHFF-----ACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGID 118
Query: 217 YATQQNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETI 275
Q +++ ++VGTPGR++D L N L ++YLVLDEAD++L FEE + I
Sbjct: 119 MVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEI 178
Query: 276 LQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS 335
L +P R+T LFSATM V+KL R L P+ I+ + Y+ T
Sbjct: 179 LGMIPRERRTFLFSATMTNKVEKLQRVCLRNPVKIETSSK-----------YSTVDTLKQ 227
Query: 336 KRTML----SDLVTVY----AKGGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQH 386
+ L D VY G ++VFTRT ++L L N + + ++G +SQ
Sbjct: 228 QYRFLPAKHKDCYLVYILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQP 287
Query: 387 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 446
+R LN F+ G +L+ TDVASRGLDIP VD+VI+Y++P + + ++HR GRT RAG+
Sbjct: 288 KRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRS 347
Query: 447 GTAILMYTSNQRRTVRSLEHDVGCKF 472
G AI + + +E +G K
Sbjct: 348 GVAISLVNQYELEWYVQIEKLIGKKL 373
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 206/365 (56%), Gaps = 17/365 (4%)
Query: 107 KLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVT 166
++G+ +L+R + G IQ+ + P ++G+D+IA+A++GTGKT + + + V
Sbjct: 37 EMGIKDDLLRGIYQYGFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGKTSMIALTVCQVVD 96
Query: 167 DDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVAYATQQNA 223
S R +AL+++PTRELA Q EK I +++ C+ GG +
Sbjct: 97 T--------SVREVQALIVSPTRELASQTEKVILTIGDFINIQAHACI-GGKSVGEDIRK 147
Query: 224 LSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGR 283
L GV VV GTPGR+ D++ +LR ++ LVLDE+D+ML+ GF++ + + + +P
Sbjct: 148 LEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDL 207
Query: 284 QTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-KRTMLSD 342
Q L SAT+P + +++ K++ P+ I LV DE L GIK + V+ K L D
Sbjct: 208 QVCLISATLPHEILEMTNKFMTDPVRI-LVKRDELTL-EGIKQFFVAVEREEWKFDTLCD 265
Query: 343 LVTVYAKGGKTIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFT 401
L + ++F TK+ D ++ + N+ A+HGD+ Q +R+ + FR G
Sbjct: 266 LYDTLTIT-QAVIFCNTKRKVDWLTEKMRNNNFTVSAMHGDMPQRERDAIMGEFRAGTTR 324
Query: 402 VLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTV 461
VL+ TDV +RGLD+ V LVI+Y+LPN+ E ++HR GR+GR G++G AI S+ + +
Sbjct: 325 VLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKIL 384
Query: 462 RSLEH 466
R +E
Sbjct: 385 RDIEQ 389
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 201/387 (51%), Gaps = 27/387 (6%)
Query: 87 ADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIAR 146
+G ++ PP D + P +++ L +GI PIQ L L G+D+I
Sbjct: 134 VNGEEIPPPIKNFKD------MRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGI 187
Query: 147 AKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKE----- 201
A TG+GKTL F +P+I + G P L++ P+RELA+Q + I+E
Sbjct: 188 AFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEVIEEFLLPL 247
Query: 202 ---SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLD 258
P L + GG+ +Q + +GV +VV TPGR+ D++ + L +YL LD
Sbjct: 248 KEAGYPELRPLLCIGGIDMRSQLEIVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLD 307
Query: 259 EADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEE 318
EAD+++ +GFE+D+ + RQT+LFSATMP ++ +R L KP+ ++ VG
Sbjct: 308 EADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVN-VGR--- 363
Query: 319 KLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKT----IVFTRTKKDADEV-SLSLTNS 373
A L + K+ + +V + KT ++F K D D++ L
Sbjct: 364 --AGAANLDVIQEVEYVKQE--AKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 419
Query: 374 IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETF 433
+ + A+HG Q +RE ++ F+ GK VLVATDVAS+GLD P++ VI+Y++P + E +
Sbjct: 420 VEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 479
Query: 434 VHRSGRTGRAGKEGTAILMYTSNQRRT 460
VHR GRTGR GK G A NQ T
Sbjct: 480 VHRIGRTGRCGKTGIATTFINKNQSET 506
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 206/386 (53%), Gaps = 30/386 (7%)
Query: 100 NDELDISK-LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFG 158
N E+ K LGLP LV + G + IQ + PALEGKD+I A+TG+GKT AF
Sbjct: 5 NKEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFA 64
Query: 159 IPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVA 216
+PI+ + + + P A V++PTRELA Q+ ++ + + C + GG+
Sbjct: 65 LPILHALLE-APRPNHFF-----ACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGID 118
Query: 217 YATQQNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETI 275
Q +++ ++VGTPGR++D L N L ++YLVLDEAD++L FEE + I
Sbjct: 119 MVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEI 178
Query: 276 LQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS 335
L +P R+T LFSATM V+KL R L P+ I+ + Y+ T
Sbjct: 179 LGMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSK-----------YSTVDTLKQ 227
Query: 336 KRTML----SDLVTVY----AKGGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQH 386
+ L D VY G ++VFTRT ++L L N + + ++G +SQ
Sbjct: 228 QYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQP 287
Query: 387 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 446
+R LN F+ G +L+ TDVASRGLDIP VD+VI+Y++P + + ++HR GRT RAG+
Sbjct: 288 KRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRS 347
Query: 447 GTAILMYTSNQRRTVRSLEHDVGCKF 472
G AI + + +E +G K
Sbjct: 348 GVAISLVNQYELEWYVQIEKLIGKKL 373
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 206/386 (53%), Gaps = 30/386 (7%)
Query: 100 NDELDISK-LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFG 158
N E+ K LGLP LV + G + IQ + PALEGKD+I A+TG+GKT AF
Sbjct: 5 NKEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFA 64
Query: 159 IPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVA 216
+PI+ + + + P A V++PTRELA Q+ ++ + + C + GG+
Sbjct: 65 LPILHALLE-APRPNHFF-----ACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGID 118
Query: 217 YATQQNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETI 275
Q +++ ++VGTPGR++D L N L ++YLVLDEAD++L FEE + I
Sbjct: 119 MVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEI 178
Query: 276 LQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS 335
L +P R+T LFSATM V+KL R L P+ I+ + Y+ T
Sbjct: 179 LGMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSK-----------YSTVDTLKQ 227
Query: 336 KRTML----SDLVTVY----AKGGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQH 386
+ L D VY G ++VFTRT ++L L N + + ++G +SQ
Sbjct: 228 QYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQP 287
Query: 387 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 446
+R LN F+ G +L+ TDVASRGLDIP VD+VI+Y++P + + ++HR GRT RAG+
Sbjct: 288 KRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRS 347
Query: 447 GTAILMYTSNQRRTVRSLEHDVGCKF 472
G AI + + +E +G K
Sbjct: 348 GVAISLVNQYELEWYVQIEKLIGKKL 373
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 196/385 (50%), Gaps = 23/385 (5%)
Query: 87 ADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIAR 146
+G D+ PP D + P +++ L +GI PIQ L L G+D+I
Sbjct: 136 VNGEDIPPPIKNFKD------MRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGI 189
Query: 147 AKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKE----- 201
A TG+GKTL F +P+I + G P L++ P+ ELA+Q + I++
Sbjct: 190 AFTGSGKTLVFVLPMIMMAMQEEIRMPIVPGEGPFGLIICPSWELARQTYEVIEQFLLPL 249
Query: 202 ---SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLD 258
P L + GG+ +Q + +GV +VV TPGR+ D++ + L +YL LD
Sbjct: 250 KEAGYPELRPLLCIGGIDMRSQLKIVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLD 309
Query: 259 EADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEE 318
EAD+++ GFE+D+ + RQT+LFSATMP ++ +R L KP+ ++ VG
Sbjct: 310 EADRLVDPGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVN-VGR--- 365
Query: 319 KLAHGIKLYAVSATTNSKR--TMLSDLVTVYAKGGKTIVFTRTKKDADEV-SLSLTNSIA 375
A L + K+ ++ L + ++F K D D + L +
Sbjct: 366 --AGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDNIHEYLLLKGVE 423
Query: 376 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 435
+ A+HGD Q RE ++ F+ GK VLVATD+AS+GLD P++ VI+Y++P + E +VH
Sbjct: 424 AVAIHGDKDQEDREYAISSFKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVH 483
Query: 436 RSGRTGRAGKEGTAILMYTSNQRRT 460
R GRTGR GK G A NQ T
Sbjct: 484 RIGRTGRCGKTGIATTFINKNQTET 508
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 210 bits (534), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 222/407 (54%), Gaps = 18/407 (4%)
Query: 107 KLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVT 166
+L L L+R+ G + PIQ A + AL G+DI A TG+GKT AF +P ++ +
Sbjct: 155 QLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLL 214
Query: 167 DDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVAYATQQNAL 224
P+R + L+L PTRELA QV+ IK + + C + GG++ Q+ AL
Sbjct: 215 ---FRPKRVHA--IRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQEVAL 269
Query: 225 SRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGR 283
D+VV TPGR+ID L N S+ L ++ L+LDEAD++L +GF +++ +++ P R
Sbjct: 270 RSRPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQELVRVCPKKR 329
Query: 284 QTMLFSATMPGWVKKLSRKYLNKPLTI--DLVGEDEEKLAHGIKLYAVSATTNSKRTMLS 341
QTMLFSATM V L + L+KPL + D + + L + N + +L+
Sbjct: 330 QTMLFSATMTEEVDDLIKLSLSKPLRLSADPLAKRPASLTEEVVRLRRMREVNQEAVLLA 389
Query: 342 DLVTVYAKGGKTIVFTRTKKDADEVSL--SLTNSIASEALHGDISQHQRERTLNGFRQGK 399
+ K I+F+ TK+ A + + L+ A+E LHG+++Q QR L FR+ +
Sbjct: 390 MCSKTFT--SKVIIFSGTKQAAHRLRIIFGLSGLKAAE-LHGNLTQAQRLGALEEFRKQQ 446
Query: 400 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRR 459
LVATDVA+RGLDI V VI++ P D ++VHR GRT RAG+ G+A+ T N R
Sbjct: 447 VDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDNDRS 506
Query: 460 TVRSLEHDVGCKFEFVSPPATQEILESSA--EQVVAALSRVHPESVE 504
++++ G K + A Q IL+ S EQ+ +S V E E
Sbjct: 507 LLKAIAKRAGSKLK-SRIVAEQSILKWSQVIEQMEDQISEVLQEERE 552
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 202/367 (55%), Gaps = 24/367 (6%)
Query: 74 EEAFKGLALD-DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRA 132
EE L LD V++D P ND + L +++ + T IQ
Sbjct: 92 EEVRHRLNLDVTVSSDSLAAPAPIESFND------MCLHPSIMKDIAYHDYTRPTSIQAQ 145
Query: 133 VLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELA 192
+ AL G+D++ A+TG+GKT AF IP+I+ +Q P RR G P ALVLAPTRELA
Sbjct: 146 AMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCL--AQPPIRR-GDGPLALVLAPTRELA 202
Query: 193 KQVEKEIK---ESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRL 249
+Q+EKE++ S T V GG Q++ L GV++ V TPGR ID + + L
Sbjct: 203 QQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSL 262
Query: 250 TEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT 309
+ + Y+VLDEAD+ML +GFE + I++++P QT+LFSATMP ++ LS++YL P+
Sbjct: 263 SRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYLASPVQ 322
Query: 310 IDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGK--------TIVFTRTKK 361
+ VG+ + + V + N K L DL+ A + TIVF K
Sbjct: 323 VK-VGKVSSPTTN-VSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKT 380
Query: 362 DADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL 420
DEV+ +L +++ +LHG SQ +RE L+ FR ++LVATDVASRGLD+ V
Sbjct: 381 RCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSH 440
Query: 421 VIHYELP 427
VI+ +LP
Sbjct: 441 VINLDLP 447
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 207 bits (527), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 201/379 (53%), Gaps = 19/379 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+ + +G PIQ + AL G DI+ARAK GTGKT AF IP ++ + D
Sbjct: 156 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDK 215
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS--TVCVYGGVAYATQQNALSRG 227
Q ++L PTRELA Q + KE +L + GG + L +
Sbjct: 216 NVIQ--------VVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQP 267
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTML 287
V ++VGTPGRI+DL L + LV+DEAD++L+ F+ +E ++Q +P+ RQ +L
Sbjct: 268 VHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFKPSIEQLIQFLPSNRQILL 327
Query: 288 FSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
FSAT P VK + +YL KP I+L+ DE L + YA +R + L T++
Sbjct: 328 FSATFPVTVKDFNDRYLRKPYIINLM--DELTLKGITQFYAFV----EERQKVHCLNTLF 381
Query: 348 AK--GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLV 404
+K ++I+F + + ++ +T + +H + Q R R + FR G LV
Sbjct: 382 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 441
Query: 405 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G G A+ + T R + +
Sbjct: 442 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLVTYEDRFNLYRI 501
Query: 465 EHDVGCKFEFVSPPATQEI 483
E ++G + + + P Q I
Sbjct: 502 EQELGTEIKQIPPFIDQAI 520
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 204 bits (520), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 200/379 (52%), Gaps = 19/379 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+ + +G PIQ + AL G DI+ARAK GTGKT AF IP ++ + D+
Sbjct: 147 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDN 206
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS--TVCVYGGVAYATQQNALSRG 227
Q ++L PTRELA Q + KE +L + GG + L +
Sbjct: 207 NIIQ--------VVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQP 258
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTML 287
V ++VGTPGRI+DL L + LV+DEAD++L+ F+ +E ++Q +P RQ ++
Sbjct: 259 VHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILM 318
Query: 288 FSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
FSAT P VK +YL KP I+L+ DE L + YA +R + L T++
Sbjct: 319 FSATFPVTVKDFKDRYLRKPYIINLM--DELTLKGITQFYAFV----EERQKVHCLNTLF 372
Query: 348 AK--GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLV 404
+K ++I+F + + ++ +T + +H + Q R R + FR G LV
Sbjct: 373 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 432
Query: 405 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G G A+ + T R + +
Sbjct: 433 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 492
Query: 465 EHDVGCKFEFVSPPATQEI 483
E ++G + + + P Q I
Sbjct: 493 EQELGTEIKQIPPFIDQAI 511
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 200/379 (52%), Gaps = 19/379 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+ + +G PIQ + AL G DI+ARAK GTGKT AF IP ++ + D+
Sbjct: 149 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDN 208
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS--TVCVYGGVAYATQQNALSRG 227
Q ++L PTRELA Q + KE +L + GG + L +
Sbjct: 209 NIIQ--------VVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQP 260
Query: 228 VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTML 287
V ++VGTPGRI+DL L + LV+DEAD++L+ F+ +E ++Q +P RQ ++
Sbjct: 261 VHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILM 320
Query: 288 FSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY 347
FSAT P VK +YL KP I+L+ DE L + YA +R + L T++
Sbjct: 321 FSATFPVTVKDFKDRYLRKPYIINLM--DELTLKGITQFYAFV----EERQKVHCLNTLF 374
Query: 348 AK--GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLV 404
+K ++I+F + + ++ +T + +H + Q R R + FR G LV
Sbjct: 375 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 434
Query: 405 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
TD+ +RG+DI V++VI+++ P + ET++HR GR+GR G G A+ + T R + +
Sbjct: 435 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 494
Query: 465 EHDVGCKFEFVSPPATQEI 483
E ++G + + + P Q +
Sbjct: 495 EQELGTEIKQIPPFIDQAV 513
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/415 (35%), Positives = 217/415 (52%), Gaps = 33/415 (7%)
Query: 107 KLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPII---- 162
+L L L+ + G PIQ A + AL G+DI A TG+GKT AF +P +
Sbjct: 144 QLNLSRSLLLACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLL 203
Query: 163 ---KGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTV--C-VYGGVA 216
KGV + L+L PTRELA QV I+E A + + C + GGV
Sbjct: 204 FRPKGV------------HAIRVLILTPTRELAVQVHSMIEELAKFTDNIRCCLIVGGVP 251
Query: 217 YATQQNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETI 275
Q+ AL D+VV TPGR+ID L N S+ L ++ L+LDEAD++L +GF +++ +
Sbjct: 252 TKGQEAALRSRPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIQEL 311
Query: 276 LQTVPTGRQTMLFSATMPGWVKKLSRKYLNKP--LTIDLVGEDEEKLAHGIKLYAVSATT 333
++ P RQTMLFSATM V L + L+KP L+ D + L +
Sbjct: 312 VRVCPKKRQTMLFSATMTEEVDDLIKLSLSKPVRLSADPSAKRPASLTEEVVRIRRMREV 371
Query: 334 NSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSL--SLTNSIASEALHGDISQHQRERT 391
N + +L+ + K I+F+ TK+ A + + L+ A+E LHG+++Q QR
Sbjct: 372 NHEAVLLAMCTKTFT--SKVIIFSGTKQAAHRLRIIFGLSGLKAAE-LHGNLTQAQRLDA 428
Query: 392 LNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAIL 451
L FR+ + LVATDVA+RGLDI V VI++ P D ++VHR GRT RAG+ G+A+
Sbjct: 429 LEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVT 488
Query: 452 MYTSNQRRTVRSLEHDVGCKFEFVSPPATQEILESSA--EQVVAALSRVHPESVE 504
T + R ++++ G K + A Q IL+ S EQ+ +S V E E
Sbjct: 489 FVTDSDRSLLKAIAKRAGSKLK-SRIVAEQAILKWSQVIEQMEYQISEVLQEKRE 542
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 13/354 (3%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
V +P ++ ++ + A D+ +G+D+ P ++ P + + G
Sbjct: 167 VESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEA------NFPDYCLDVIAKLG 220
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
PIQ AL G+D+I A+TG+GKTL++ +P I V S P+ G P
Sbjct: 221 FVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV---SAQPRLVQGEGPVV 277
Query: 183 LVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
LVLAPTRELA Q+++E + S + C+YGG Q L GV++V+ TPGR+ID
Sbjct: 278 LVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLID 337
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
++ L V YLVLDEAD+ML +GFE + I+ + RQT+ +SAT P V+ L+
Sbjct: 338 MLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLA 397
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
R++L+ P + ++G K I T K L L+ G + ++FT TK
Sbjct: 398 RQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETK 456
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 413
K D+V+ L + + ++HGD +Q +R+ L F+ G+ ++ ATDVA+RGL
Sbjct: 457 KGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 510
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 13/354 (3%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
V +P ++ ++ + A D+ +G+D+ P ++ P + + G
Sbjct: 167 VESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEA------NFPDYCLDVIAKLG 220
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
PIQ AL G+D+I A+TG+GKTL++ +P I V S P+ G P
Sbjct: 221 FVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV---SAQPRLVQGEGPVV 277
Query: 183 LVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
LVLAPTRELA Q+++E + S + C+YGG Q L GV++V+ TPGR+ID
Sbjct: 278 LVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLID 337
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
++ L V YLVLDEAD+ML +GFE + I+ + RQT+ +SAT P V+ L+
Sbjct: 338 MLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLA 397
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
R++L+ P + ++G K I T K L L+ G + ++FT TK
Sbjct: 398 RQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETK 456
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 413
K D+V+ L + + ++HGD +Q +R+ L F+ G+ ++ ATDVA+RGL
Sbjct: 457 KGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 510
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 13/354 (3%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
V +P ++ ++ + A D+ +G+D+ P ++ P + + G
Sbjct: 167 VESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEA------NFPDYCLDVIAKLG 220
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
PIQ AL G+D+I A+TG+GKTL++ +P I V S P+ G P
Sbjct: 221 FVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV---SAQPRLVQGEGPVV 277
Query: 183 LVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
LVLAPTRELA Q+++E + S + C+YGG Q L GV++V+ TPGR+ID
Sbjct: 278 LVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLID 337
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
++ L V YLVLDEAD+ML +GFE + I+ + RQT+ +SAT P V+ L+
Sbjct: 338 MLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLA 397
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
R++L+ P + ++G K I T K L L+ G + ++FT TK
Sbjct: 398 RQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETK 456
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 413
K D+V+ L + + ++HGD +Q +R+ L F+ G+ ++ ATDVA+RGL
Sbjct: 457 KGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 510
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 13/354 (3%)
Query: 63 VATPNSSVLTAEEAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRG 122
V +P ++ ++ + A D+ +G+D+ P ++ P + + G
Sbjct: 167 VESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEA------NFPDYCLDVIAKLG 220
Query: 123 ITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKA 182
PIQ AL G+D+I A+TG+GKTL++ +P I V S P+ G P
Sbjct: 221 FVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV---SAQPRLVQGEGPVV 277
Query: 183 LVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID 240
LVLAPTRELA Q+++E + S + C+YGG Q L GV++V+ TPGR+ID
Sbjct: 278 LVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLID 337
Query: 241 LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLS 300
++ L V YLVLDEAD+ML +GFE + I+ + RQT+ +SAT P V+ L+
Sbjct: 338 MLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLA 397
Query: 301 RKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTK 360
R++L+ P + ++G K I T K L L+ G + ++FT TK
Sbjct: 398 RQFLHNPYKV-VIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETK 456
Query: 361 KDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 413
K D+V+ L + + ++HGD +Q +R+ L F+ G+ ++ ATDVA+RGL
Sbjct: 457 KGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 510
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 198/353 (56%), Gaps = 18/353 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 130 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---D 186
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
P + + ALVL TRELA Q+ E++ + YL + V YGGV ++ L
Sbjct: 187 PVPGQVA-----ALVLCHTRELAYQICHEVERFSTYLPDIKVAVFYGGVNIKVHKDLLKN 241
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGRI+ L L L V++ +LDE D+ML ++ +DV+ I + P +Q
Sbjct: 242 ECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRKDVQEIFKLTPHDKQ 301
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA-HGIKLYAVSATTNSKRTMLSDL 343
M+FSAT+ ++ + +K++ P+ I + +DE KL HG+ + + K L+DL
Sbjct: 302 VMMFSATLSKEIRPVCKKFMQDPMEIYV--DDEAKLTLHGLVQHYIKLQEPEKNRKLNDL 359
Query: 344 VTVYAKGGKTIVFTRTKKDADEVS-LSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
+ + ++F ++ A E++ L + + S +H +SQ +R + GF++GK +
Sbjct: 360 LDAL-DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRI 418
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
LVATD+ RG+DI V++VI+Y++P+ +T++HR GR GR G +G AI +S
Sbjct: 419 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 471
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 194/348 (55%), Gaps = 18/348 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---D 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
P + S ALVL TRELA Q+ E + + YL + V YGGV ++ L
Sbjct: 110 PVPGQVS-----ALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGRI+ L +L L V++ VLDE D+ML ++ +DV+ I + P +Q
Sbjct: 165 ECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA-HGIKLYAVSATTNSKRTMLSDL 343
M+FSAT+ ++ + +K++ P+ I + +DE KL HG+ + + K L+DL
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYV--DDEAKLTLHGLVQHYIKLKEEEKNRKLNDL 282
Query: 344 VTVYAKGGKTIVFTRTKKDADEVS-LSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
+ + ++F ++ A E+ L + + S +H +SQ +R + GF++G +
Sbjct: 283 LDAL-DFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRI 341
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAI 450
LVATD+ RG+DI V++VI+Y++P+ +T++HR GR GR G +G AI
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 194/348 (55%), Gaps = 18/348 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---D 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
P + S ALVL TRELA Q+ E + + YL + V YGGV ++ L
Sbjct: 110 PVPGQVS-----ALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGRI+ L +L L V++ VLDE D+ML ++ +DV+ I + P +Q
Sbjct: 165 ECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA-HGIKLYAVSATTNSKRTMLSDL 343
M+FSAT+ ++ + +K++ P+ I + +DE KL HG+ + + K L+DL
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYV--DDEAKLTLHGLVQHYIKLKEEEKNRKLNDL 282
Query: 344 VTVYAKGGKTIVFTRTKKDADEVS-LSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
+ + ++F ++ A E+ L + + S +H +SQ +R + GF++G +
Sbjct: 283 LDAL-DFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRI 341
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAI 450
LVATD+ RG+DI V++VI+Y++P+ +T++HR GR GR G +G AI
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 192 bits (489), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 194/348 (55%), Gaps = 18/348 (5%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D++ +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQI---D 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
P + S AL+L TRELA Q+ E + + YL+ + V YGGV ++ L
Sbjct: 110 PVPGQVS-----ALILCHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGRI+ L L L V++ +LDE D+ML ++ +DV+ I + P +Q
Sbjct: 165 ECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA-HGIKLYAVSATTNSKRTMLSDL 343
M+FSAT+ ++ + +K++ P+ I + +DE KL HG+ + + K L+DL
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYV--DDEAKLTLHGLVQHYIKLKEEEKNRKLNDL 282
Query: 344 VTVYAKGGKTIVFTRTKKDADEV-SLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
+ + ++F ++ A E+ L + + S +H +SQ +R + GF++G +
Sbjct: 283 LDAL-DFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRI 341
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAI 450
LVATD+ RG+DI V++VI+Y++P+ +T++HR GR GR G +G AI
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 199/379 (52%), Gaps = 18/379 (4%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
S LGL V++ G+ + +Q+ + L G+ +I +TG+GKT AF +PI++
Sbjct: 54 FSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQR 113
Query: 165 VTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVAYATQQN 222
+ + + G ALV+ PTRELA Q+ ++ + S+ L V GG+ Q
Sbjct: 114 LAEHT------FGVF--ALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTK 165
Query: 223 ALSRGVDVVVGTPGRIIDLVNGN---SLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV 279
L +V+ TPGRI L+ N + ++LVLDEAD++L VGF+++++ I Q +
Sbjct: 166 ELVARPHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCL 225
Query: 280 PTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTM 339
P RQ + FSAT ++KL +Y +K + + K +K V N K
Sbjct: 226 PENRQNLFFSATTTSNLQKLRERYQDKLYAFE--AYEGFKTVENLKQQVVFIPKNVKDVY 283
Query: 340 LSDLVTVYAKGG--KTIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFR 396
L +++ G IVF T +D ++L L + AL+ SQ QR L+ F+
Sbjct: 284 LLHILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFK 343
Query: 397 QGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSN 456
GK VL+ATDVA RGLDIP VDLVI+Y++P P ++HR GRT RAG+ G A+ + T N
Sbjct: 344 SGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQN 403
Query: 457 QRRTVRSLEHDVGCKFEFV 475
+R +E + + E +
Sbjct: 404 DVDLIREIETLIERQLEMI 422
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 231/458 (50%), Gaps = 33/458 (7%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
DE IS L +++L G T + +Q L LEG D++ +AKTGTGKT AF +P
Sbjct: 290 DECAISPL-----TIKALSTSGYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLP 344
Query: 161 IIKGVTDDSQSPQRRSGRLPK--ALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGV 215
I+ V S + S R P L+L PTRELA Q+ E K Y V V GGV
Sbjct: 345 AIETVLKAMSS--KTSHRAPPIYVLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVGGV 402
Query: 216 AYATQQNAL-SRGVDVVVGTPGRIIDLVN---GNSLRLTEVQYLVLDEADQMLAVGFEED 271
+ Q L S ++V TPGR++D + G S+R+ +Q L+LDEAD +L +GF +D
Sbjct: 403 RFKVDQKRLESDPCQMLVATPGRLLDHIENKTGISVRVMGLQMLILDEADHLLDLGFRKD 462
Query: 272 VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAVS 330
+E I+ +P RQ++LFSAT+P V+++S+ L + +D VG + +K +
Sbjct: 463 IEKIVDCLPRQRQSLLFSATIPKEVRRVSQLVLKREHKYVDTVGMGCVETPVQVKQSYLI 522
Query: 331 ATTNSKRTMLSDLVTVYAKGG---KTIVFTRTKKDADEVSLSLTNSIASEA------LHG 381
A S ++ ++ + K IVF T + SLT + + +H
Sbjct: 523 APHESHFQIVHHILKEHISQTPDYKVIVFCITG-----MVTSLTYHLLRDMKLNVREIHS 577
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
Q R R + F++ K +LV++DV SRG++ P+V LVI +P+D E ++HR GRTG
Sbjct: 578 RKPQLYRTRVSDEFKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTG 637
Query: 442 RAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEF--VSPPATQEILESSAEQVVAALSRVH 499
R GKEG IL+ + + ++ KF + P A +I +S A+ +
Sbjct: 638 REGKEGKGILLIAPWEEYFLNEIKDLPLEKFPLPDLDPQAQLKIEQSMAKIDNDIKEAAY 697
Query: 500 PESVEFFTATAQKLVEERGTSVLAAALAQLSGFSRPPS 537
+ ++ + + E+ + LA+ ++ G RPPS
Sbjct: 698 HAWLGYYNSIREIGREKSTVAELASQFSESIGLQRPPS 735
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 187 bits (474), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 201/367 (54%), Gaps = 23/367 (6%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
D+ +S L L + + + G + +Q A L L+GKD++A+AKTGTGKT+AF +P
Sbjct: 104 DKCSVSPLSL-----KGVKDAGYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLP 158
Query: 161 IIKGVTDDSQSPQRRSGRLPK---ALVLAPTRELAKQVEKEIKESAPYLSTV---CVYGG 214
I+ V +SP G+ LV+ PTRELA Q E + Y T+ V GG
Sbjct: 159 SIEVVV---KSPPNNRGQNQTPILVLVVCPTRELACQAAAEATKLLKYHPTIGAQVVIGG 215
Query: 215 VAYATQQNALSRG-VDVVVGTPGRIIDLVN---GNSLRLTEVQYLVLDEADQMLAVGFEE 270
+ +++Q + + +++ TPGR+ D + G + +L V+ LVLDEADQ+L +GF +
Sbjct: 216 TSLSSEQKRIQKNPCQILIATPGRLKDHIANTAGFASKLMGVKALVLDEADQLLDMGFRK 275
Query: 271 DVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAV 329
D+E I+ +VP RQT++FSAT+P V ++ L K I+ V E E+ ++ +
Sbjct: 276 DIEKIIASVPKQRQTLMFSATIPDAVHQVCNVALKKDFEFINTVQEGTEETHSQVRQMHL 335
Query: 330 SATTNSKRTMLSDLVTVYAKGG---KTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQ 385
A + ++LS ++ + K +VF T V+ L ++ +H +Q
Sbjct: 336 IAPLDKHFSLLSVILKEHIADDVDYKVLVFCTTAMVTSLVANLLGKLNLNVREIHSRKNQ 395
Query: 386 HQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 445
R R + FR+ K +LV +DV++RG+D P+V LV+ LP D + ++HR GRTGR GK
Sbjct: 396 SYRTRVSDEFRKSKRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKGK 455
Query: 446 EGTAILM 452
EG IL+
Sbjct: 456 EGKGILL 462
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 194/353 (54%), Gaps = 13/353 (3%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
LGL ++ + +G PIQR + L G D++A A+TG+GKT AF +P++ +
Sbjct: 23 LGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLHRL-- 80
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVAYATQQNALS 225
+ PQ G + + L+L+PTR+LA+Q K KE + L + GG + +Q L+
Sbjct: 81 NQHVPQ---GGV-RGLILSPTRDLAQQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELA 136
Query: 226 RGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQ 284
+ D+++ TPGR++ L + + L +V+Y+V DEAD + +GF E + IL + RQ
Sbjct: 137 QNPDIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQ 196
Query: 285 TMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLV 344
T+LFSAT+P + + ++ L P + L + E K++ +KL + K L L+
Sbjct: 197 TLLFSATLPSALAEFAKAGLRDPRLVRL--DLETKISPDLKLVFFTLRQEEKYAALLYLI 254
Query: 345 -TVYAKGGKTIVFTRTKKDADEV-SLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 402
+ +T++F TK + + SL I +GD+ Q R+ + FR K +
Sbjct: 255 RELIGSDEQTLIFVSTKHHVEFLNSLFQLEGIRPSVCYGDMDQDARKEHVARFRSRKTML 314
Query: 403 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
L+ TD+A+RG+DIP +D VI+++ P P+ FVHR GR RAG+ GTA T+
Sbjct: 315 LIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTA 367
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 223/449 (49%), Gaps = 70/449 (15%)
Query: 85 VNADGYDLAPPTTVSNDEL-DISKLGLPSELVRSLVNRGITSLFPIQRAVL-VPALEGKD 142
VNAD D + E ++L L L++++ G PIQ+A + A +GKD
Sbjct: 143 VNADVKDSVDEENIDETEYYAWNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKD 202
Query: 143 IIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSG-------------RLPKALVLAPTR 189
+I A+TG+GKTLAFG+PI++ + ++ + + SG L ++L++APTR
Sbjct: 203 VIGAAETGSGKTLAFGLPILQRLLEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPTR 262
Query: 190 ELAKQVEKEIKESAPYLST--VCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSL 247
ELA QV K +K A +++ + GG+ Q+ L ++VV TPGR+ +L++
Sbjct: 263 ELALQVAKHLKAVAKHINVRVTAIVGGILPEKQERLLKARPEIVVATPGRLWELMSSGEK 322
Query: 248 RLTEVQ---YLVLDEADQMLAVGFEEDVETILQTVPTG---------------------- 282
L E+ + VLDEAD+M+ G +++++I+ +P
Sbjct: 323 HLIELHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQK 382
Query: 283 --RQTMLFSATMP---GWVKKLSRKYLNKPL-------TIDLVGE--------------D 316
RQT++FSAT+ + KKL R + K +I+ + E +
Sbjct: 383 KKRQTLVFSATVALSADFRKKLKRGSIQKKQLSTDGLDSIETLSERAGMRPNAAIIDLTN 442
Query: 317 EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTN-SIA 375
LA I+ + T + K L ++TV+ +G +TIVF + +S L +
Sbjct: 443 PSILAAKIEESFIECTEDDKDAHLYYILTVHGQG-RTIVFCTSIAALRHISSILRILGVN 501
Query: 376 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 435
LH + Q R + ++ FR+ +LVATDVA+RGLDIP V V+HY+LP+ E +VH
Sbjct: 502 VWTLHAQMQQRARLKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVH 561
Query: 436 RSGRTGRAGKEGTAILMYTSNQRRTVRSL 464
RSGRT RA EG +I + + + SL
Sbjct: 562 RSGRTARASAEGCSIALISPKETSKFASL 590
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 193/366 (52%), Gaps = 21/366 (5%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
D+ +S L L + + + G + +Q A L L+GKD++A+AKTGTGKT+AF +P
Sbjct: 203 DQCSVSPLSL-----KGIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLP 257
Query: 161 IIKGVTDDSQSPQRRSGRLPK--ALVLAPTRELAKQVEKEIKESAPYLSTV---CVYGGV 215
I+ V P R R P LV+ PTRELA Q E + Y T+ V GG
Sbjct: 258 SIEVVV--KSPPSDRDQRRPPIFVLVICPTRELACQAAAEATKLLKYHPTIGVQVVIGGT 315
Query: 216 AYATQQNAL-SRGVDVVVGTPGRIIDLVN---GNSLRLTEVQYLVLDEADQMLAVGFEED 271
A +Q + + ++V TPGR+ D + G + RL V+ LVLDEAD +L +GF +D
Sbjct: 316 RLALEQKRMQANPCQILVATPGRLRDHIENTAGFASRLMGVKSLVLDEADHLLDMGFRKD 375
Query: 272 VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAVS 330
+E I+ +P RQT++FSAT+P V+++ L + I+ V E E ++ +
Sbjct: 376 IEKIIAAIPKQRQTLMFSATIPDEVRQVCHVALKRDFEYINTVQEGSEDTHSQVRQMHLV 435
Query: 331 ATTNSKRTMLSDLVTVYAKGG---KTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQH 386
A + +L ++ + K +VF T V+ L ++ +H Q
Sbjct: 436 APLDKHFPLLYAILKEHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQS 495
Query: 387 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 446
R R + FR+ K +LV +DV++RG+D P+V LV+ LP D + ++HR GRTGR GKE
Sbjct: 496 YRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGKE 555
Query: 447 GTAILM 452
G IL+
Sbjct: 556 GQGILL 561
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 194/364 (53%), Gaps = 17/364 (4%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
DE +S L L + + + G + +Q A L LEGKD++A+AKTGTGKT+AF +P
Sbjct: 108 DECSVSPLSL-----KGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLP 162
Query: 161 IIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTV---CVYGGVAY 217
I+ V S +S LV+ PTRELA+Q E + Y T+ V GG
Sbjct: 163 SIEVVVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKI 222
Query: 218 ATQQNALSRG-VDVVVGTPGRIIDLVN---GNSLRLTEVQYLVLDEADQMLAVGFEEDVE 273
++Q + + ++V TPGR+ D + G + L ++ V+DEAD++L +GF +D+E
Sbjct: 223 VSEQKRIQKNPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIE 282
Query: 274 TILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAVSAT 332
I+ +VP RQT++FSAT+P V ++ L K I+ V E E+ ++ + A
Sbjct: 283 EIITSVPKQRQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHLIAP 342
Query: 333 TNSKRTMLSDLVTVYAKGG---KTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQR 388
+ ++LS ++ + K +VF T V+ L + ++ Q R
Sbjct: 343 LDKHFSLLSVILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFR 402
Query: 389 ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGT 448
R + FR+ K +LV +DV++RG+D P+V LV+ +P D E ++HR GRTGR GKEG
Sbjct: 403 NRVSDEFRKSKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGKEGK 462
Query: 449 AILM 452
IL+
Sbjct: 463 GILL 466
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 197/381 (51%), Gaps = 33/381 (8%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L ++++L + P+Q A + KD+ A TG+GKTLAF IP+++ + ++
Sbjct: 22 LSEPVLQALTDSNFDFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVIPLVEILRRNA 81
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC------VYGGV-AYATQQN 222
+P+ ++++PTRELA Q+ + P++ST+ + GGV A +
Sbjct: 82 SNPKPHQVL---GVIISPTRELASQI---YHVAQPFISTLANVKSMLLVGGVEVKADIKK 135
Query: 223 ALSRGVDVVVGTPGRIIDLVNG-NSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPT 281
G +V++GTPGR+ D++N + L + L+LDEAD++L +GF++ + I+ +P
Sbjct: 136 IEEEGANVLIGTPGRLHDIMNRMDILDFKSFEILILDEADRLLDMGFQKQINAIITELPK 195
Query: 282 GRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGE-------------DEEKLAHGIKLYA 328
R+T LFSAT V++L++ L P+ +++ E + K G+++
Sbjct: 196 LRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKTANDSASSKKIESSKTPSGLQIEY 255
Query: 329 VSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSL-----SLTNSIASEALHGDI 383
+ + K + L D + V + K I++ T D L S+ + +LHG +
Sbjct: 256 LECEADKKPSQLVDFL-VKNRSKKIIIYFMTCACVDYWGLVLPRLSVLKGFSLISLHGKM 314
Query: 384 SQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRA 443
Q RE+ L F +L+ TDVA+RGLDIP VD ++ Y+ P DP FVHR GRT R
Sbjct: 315 KQSVREKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARL 374
Query: 444 GKEGTAILMYTSNQRRTVRSL 464
GK+G A++ + V L
Sbjct: 375 GKQGHAVVFLLPKEESYVEFL 395
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 198/360 (55%), Gaps = 17/360 (4%)
Query: 116 RSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRR 175
+++V+ G L IQ + P L GKD++ A+TG+GKTLAF IP ++ + +R
Sbjct: 109 KAIVDMGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELL--HKLKFNQR 166
Query: 176 SGRLPKALVLAPTRELAKQ----VEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVV 231
SG +++ PTRELA Q +K +K + V GG A T+ +L++G+++V
Sbjct: 167 SG--TGVVIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIV 224
Query: 232 VGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSA 290
V TPGR++D L N ++ L++DEAD++L FE++++ I++ +P RQT LFSA
Sbjct: 225 VATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSA 284
Query: 291 TMPGWVKKLSR-KYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAK 349
T V+ L+R + P+ ID V + +K+ + L +KR M+ K
Sbjct: 285 TQTKKVEDLARLSFQTTPIYID-VDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHK 343
Query: 350 GGKTIVFTRTKKDADEVSLSLTNSIA--SEALHGDISQHQRERTLNGFRQGKFTVLVATD 407
K +VF + ++ + + N I +++G Q R T F Q + +L+ TD
Sbjct: 344 SKKVMVFF-SSCNSVKFHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTD 402
Query: 408 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRA--GKEGTAILMYTSNQRRTVRSLE 465
VA+RGLDIP+VD ++ Y+ P++P+ ++HR GRT R GK G A+L + + +R L+
Sbjct: 403 VAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGK-GNALLFLIPEELQFLRYLK 461
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 176 bits (447), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 190/367 (51%), Gaps = 10/367 (2%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
S LGL +++ T + IQ + P L GKD++ A+TG+GKTLAF IP ++
Sbjct: 92 FSSLGLSERTSQAIAAMSFTHMTQIQAKSIPPLLMGKDVLGAARTGSGKTLAFLIPAVEL 151
Query: 165 VTDDSQSPQRRSGRLPKALVLAPTRELAKQ---VEKEIKESAPYLSTVCVYGGVAYATQQ 221
+ + +P+ +G +V+ PTRELA Q V E+ + + V GGV +
Sbjct: 152 LYNVQFTPRNGTG----VIVICPTRELAIQTHAVASELMKGYHSQTLGKVIGGVGRKGEA 207
Query: 222 NALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVP 280
+ +GV++++ TPGR++D L N ++ L++DEAD++L FEE+++ IL +P
Sbjct: 208 ERIVKGVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNILP 267
Query: 281 TGRQTMLFSATMPGWVKKLSR-KYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTM 339
RQT LFSAT V+ L+R + P+ +D+ E+ G++ V + +
Sbjct: 268 KKRQTALFSATQTKKVEDLARLSFQTPPVYVDVDIGREKVTVEGLEQGYVVVPCAKRFVV 327
Query: 340 LSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGK 399
L + Y + F+ L + +HG Q+ R T F + +
Sbjct: 328 LYSFLKRYQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGKQKQNSRTSTFFNFCKAE 387
Query: 400 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRA-GKEGTAILMYTSNQR 458
+L+ TDVA+RGLDIP VD ++ ++ P++P+ ++HR GRT R G +G A+L +
Sbjct: 388 KGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEEL 447
Query: 459 RTVRSLE 465
+ +R L+
Sbjct: 448 QFLRYLK 454
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 200/382 (52%), Gaps = 22/382 (5%)
Query: 91 DLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTG 150
D+ VS + + LP +L++++ G P+Q + AL GK+++ A TG
Sbjct: 127 DIHVKGVVSAPVMSFASCNLPDKLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLVLADTG 186
Query: 151 TGKTLAFGIPIIKGVTDDSQSPQRR-----SGRLPKALVLAPTRELAKQVEKEIK---ES 202
+GK+ +F IPII S+ R + P A+VL PTREL+ QVE+ K +
Sbjct: 187 SGKSASFLIPII------SRCASHRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKG 240
Query: 203 APYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQ 262
P+ T V GG A A Q + +GV+++VGTPGR++DL+ N + L +V V+DE D
Sbjct: 241 LPF-KTALVVGGDAMARQLYRIQQGVELIVGTPGRLVDLLTKNEIDLDDVTTFVVDEVDC 299
Query: 263 MLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAH 322
ML GF + V I T + Q +++SAT ++K++ + K + VGE +
Sbjct: 300 MLQRGFRDQVLQIF-TALSQPQVLMYSATTSDSLEKMANS-MAKDTVVITVGE-PNRPNK 356
Query: 323 GIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVF---TRTKKDADEVSLSLTNSIASEAL 379
+K A+ + K+ L D++ +V +R D +++++ + + ++
Sbjct: 357 AVKQLAIWVESKQKKQKLFDILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSI 416
Query: 380 HGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 439
HG+ S +R + F G+F V+VAT V RG+D+ V VI +++PN +VH+ GR
Sbjct: 417 HGEKSMTERREIMQSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGR 476
Query: 440 TGRAGKEGTAILMYTSNQRRTV 461
R G+EG AI+ + +++ + V
Sbjct: 477 ASRMGEEGQAIV-FVNDENKNV 497
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 201/377 (53%), Gaps = 17/377 (4%)
Query: 87 ADGYDLAPPTTVSNDELDISKL---GLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
ADG V D+L ISK GL S+ + ++ S+ IQRA L AL G+D+
Sbjct: 56 ADGTFSRYAGVVRFDQLPISKKTKDGLISKKTQDELHSKFVSMTKIQRASLPHALCGRDV 115
Query: 144 IARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQ---VEKEIK 200
+ AKTG+GKTLAF IP+++ + + + G +++++PTRELA Q V I
Sbjct: 116 LGAAKTGSGKTLAFIIPVLEKLHRERWGTEDGVG----SIIISPTRELAGQIFGVLNAIG 171
Query: 201 ESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGN-SLRLTEVQYLVLDE 259
E + + + + GG A ++ +++ +++++ TPGR++ ++ + +++Q LVLDE
Sbjct: 172 EHHRFSAGLLIGGGGDVAIEKECVNK-LNILICTPGRLLQHMDETPNFDCSQMQVLVLDE 230
Query: 260 ADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEK 319
AD++L GF+++V I+ +P RQTMLFSAT V+ L+R L P I + E
Sbjct: 231 ADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVHEESVTA 290
Query: 320 LAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDAD---EVSLSLTNSIAS 376
+K + + K ML + + + KT+VF + K EV L I
Sbjct: 291 TPTLLKQTVMIVPLDQKLDMLWTFIKRHLQ-SKTLVFLSSCKQVKFVFEVFKKLHPGIPL 349
Query: 377 EALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPN-VDLVIHYELPNDPETFVH 435
+ LHG + Q +R + F + K +VL +TDVA+RGLD VD V+ + P + +++H
Sbjct: 350 KCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIH 409
Query: 436 RSGRTGRAGKEGTAILM 452
R GRT R G ++L
Sbjct: 410 RVGRTARYNSVGKSVLF 426
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 215/455 (47%), Gaps = 61/455 (13%)
Query: 100 NDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGI 159
+++ +LGL + LVR+L+ + I PIQ + LEGKD++ARAKTG+GKTLA+ +
Sbjct: 22 DEDRSFEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLL 81
Query: 160 PIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKE-----SAPYLSTVCVYGG 214
P+++ + + R P VLAP+REL +Q+ E+K P L V +
Sbjct: 82 PLLQKLFTANVD---RKKLAPNVFVLAPSRELCQQIYVEVKSLLELCKVP-LKAVQLNSN 137
Query: 215 VAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEV----QYLVLDEADQMLAVGFEE 270
+ Q AL DV++ TP I ++ + L+ + + LVLDEAD +L+ G+E
Sbjct: 138 MLATDLQAALVGPPDVLISTPACIAKCLSNSVLQAASINGSLETLVLDEADLLLSYGYEN 197
Query: 271 DVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKP--LTIDLVGE-DEEKLAHGIKLY 327
D++ + +P Q +L SAT V KL + L+ P LT+ VG +E + ++ +
Sbjct: 198 DIKALTPHIPRSCQCLLMSATSSDDVDKLKKLMLHNPVILTLPEVGNRKDEVIPKNVQQF 257
Query: 328 AVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQH 386
+ N K + ++ + K ++FT + + L L I S L+ ++ Q+
Sbjct: 258 WIYCPANDKLLYILAMLKLELVQKKVLIFTNNIDTSFRLKLFLEKFGIKSAVLNAELPQN 317
Query: 387 QRERTLNGFRQGKFTVLVATDVAS---------------------------------RGL 413
R L F G F L+ATD++ RG+
Sbjct: 318 SRLHILEEFNAGLFDYLIATDISQSTEKDEAPKENIVGSKKSRKYTKLKLDSEFGVVRGI 377
Query: 414 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVG---- 469
D NV VI++E+P +VHR GRTGRA GT+I + ++++ T + VG
Sbjct: 378 DFKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISLVSTDEMDTFEEVRSFVGDNEN 437
Query: 470 ------CKFEFVSPPATQEILESSAEQVVAALSRV 498
+F ++ A E L AE V +++++
Sbjct: 438 NGSNSIAEFPLLTKSAV-ESLRYRAEDVAKSVTKI 471
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 209/403 (51%), Gaps = 18/403 (4%)
Query: 107 KLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVT 166
K L S+ + + S+ IQRA L AL G+D++ AKTG+GKTLAF IP+++ +
Sbjct: 79 KKALISKKTQDELRSKFVSMTDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLY 138
Query: 167 DDSQSPQRRSGRLPKALVLAPTRELAKQ---VEKEIKESAPYLSTVCVYGGVAYATQQNA 223
P+ G +++++PT ELA Q V K I + + + + G AT++
Sbjct: 139 RKRWGPEDGVG----SIIISPTWELAGQIFAVLKAIGCIHGFSAGLLIGGRQGVATEKEC 194
Query: 224 LSRGVDVVVGTPGRIIDLVNGN-SLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTG 282
+++ ++V++ TPGR++ ++ + +++Q LVLDEAD++L GF++++ I+ +P
Sbjct: 195 VNK-LNVLICTPGRLLQHMDETPNFDCSKMQVLVLDEADRILDSGFKKELNAIISQLPKR 253
Query: 283 RQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSD 342
RQTMLFSAT V+ L+R L P I + E +K + + K ML +
Sbjct: 254 RQTMLFSATQTKSVQDLARLSLKDPEYISVHEESVTATPTLLKQKVMIVPLDQKLDMLWN 313
Query: 343 LVTVYAKGGKTIVFTRTKKDAD---EVSLSLTNSIASEALHGDISQHQRERTLNGFRQGK 399
+ + K KT+VF + K E L I + LHG + Q +R + F + K
Sbjct: 314 FIKTHLK-SKTLVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCE-K 371
Query: 400 FTVLVATDVASRGLDIPN-VDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQR 458
++L ATDVA+RGLD VD V+ + P + +++HR GRT R G ++L ++
Sbjct: 372 CSILFATDVAARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSVLYLLPSET 431
Query: 459 RTVRSLEHDVGCKFEFVSPPATQEILESSAEQVVAALSRVHPE 501
+ + LE K PP ++ L ++A+L +PE
Sbjct: 432 KMLEKLE---AGKVPVHYPPKPRKELLQPVSSLLASLLVKYPE 471
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 163 bits (413), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 207/396 (52%), Gaps = 22/396 (5%)
Query: 84 DVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDI 143
+++ GY++ P S DEL ++ PS L+ L G PIQR + L+ ++
Sbjct: 116 NIHVSGYNVPSPLQ-SFDELK-TRYKCPSYLLWKLAELGFREPTPIQRQAIPVLLQDREC 173
Query: 144 IARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESA 203
A A TG+GKTLAF P++ + ++ R A+++ +REL+ Q +E K+ A
Sbjct: 174 FACAPTGSGKTLAFVCPMLMKLKAHAKGGVR-------AVIICHSRELSGQTYRECKKLA 226
Query: 204 PYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQM 263
+ D+++ TP R+ + + L+ V+YLVLDE+D++
Sbjct: 227 KGEKFRIKLMTKNLLRNADFSKFSCDILISTPLRLCLAIKKKKVDLSRVEYLVLDESDKL 286
Query: 264 LAVGFEEDVETILQ--TVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLA 321
+ +++I++ T P+ ++ LFSAT+P +V+ +R+ ++ + + +VG + +
Sbjct: 287 FEPQLFKQIDSIIKACTNPSIIRS-LFSATLPDFVEDRARELMHDAVRV-IVGR-KNMAS 343
Query: 322 HGIKLYAVSATTNSKRTMLSDLVTVYAK--GGKTIVFTRTKKDADEVSLSLT-NSIASEA 378
IK V T S+ L + +A+ +VF ++K+ A E+ L ++I +
Sbjct: 344 DTIKQKLV--FTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDV 401
Query: 379 LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSG 438
+H D+SQ +RE ++ FR GK VL+ATDV +RG+D ++ VI+Y+ P+ ++HR G
Sbjct: 402 IHSDLSQEERENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIG 461
Query: 439 RTGRAGKEGTAILMYTSNQ---RRTVRSLEHDVGCK 471
R+GRAG+ G AI YT R V +L GC+
Sbjct: 462 RSGRAGRSGEAITFYTEEDIPFLRNVSNLMASSGCE 497
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 191/368 (51%), Gaps = 29/368 (7%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPA-LEGKDIIARAKTGTGKTLAFGIPIIKGVT 166
LGL E++ ++ GI IQ + VPA L+GK ++ + TG+GKTLA+ +P+++ +
Sbjct: 114 LGLGDEVMGAVREMGIEVPTEIQ-CIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLR 172
Query: 167 DDSQ------SPQRRSGRLPKALVLAPTRELAKQV---EKEIKESAPYLSTVCVYGGVAY 217
D Q P+R P+A+VL PTREL++QV K I A + T+ V GG
Sbjct: 173 RDEQMNGLVLKPKR-----PRAVVLCPTRELSEQVFRVAKAISHHARFRCTM-VSGGGRL 226
Query: 218 ATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ 277
Q+ +LS +D+VVGTPGRI+ + ++ ++QY+VLDEAD M GF D++ L
Sbjct: 227 RPQEESLSNPIDMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLA 286
Query: 278 TVPT--------GRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAV 329
+ G QT+L +ATM V+ L + + + ++ +
Sbjct: 287 PLKHRASKPDSLGFQTVLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKL 346
Query: 330 SATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQR 388
S T N ++L L AKG + +VF T + V L N I++ HG++ QR
Sbjct: 347 SGTENKLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQR 406
Query: 389 ERTLNGFRQGK--FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 446
LN F+ LV TD+A+RGLD+ +VD VI ++ P + ++HR+GRT R G +
Sbjct: 407 VENLNKFKSNNDDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAK 465
Query: 447 GTAILMYT 454
G + T
Sbjct: 466 GKITSLVT 473
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 156 bits (395), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 199/426 (46%), Gaps = 64/426 (15%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKG 164
S+LG+P L+ L G +Q A + L+ +D+I ++ TG+GKTLA+ +PI+
Sbjct: 110 FSELGIPEVLIERLGKEGFNVPTDVQSAAVPTILKNRDVIIQSYTGSGKTLAYLLPILSV 169
Query: 165 V----------TDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV--- 211
+ D ++ G +A+++AP+REL Q+ +E ++ + V
Sbjct: 170 IGPLKGENNEGGGDGGESGKKLG--VEAVIVAPSRELGMQIVREFEKILGMENRKVVQQL 227
Query: 212 YGGVAYATQQNALSRGV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEE 270
GG Q+ AL + +VVGTPGRI +L LR QYLVLDE D++L+ F E
Sbjct: 228 VGGANRTRQEEALKKNKPAIVVGTPGRIAELSASGKLRAHGCQYLVLDEVDELLSFNFRE 287
Query: 271 DVETILQTV-------------PTGRQTMLFSATMPGWVKKLSRKYLNKPLTID---LVG 314
D+ +L+ V T RQ ++ SAT+P V + ++ + + PL + +V
Sbjct: 288 DMHRLLEHVGRRSGADHNSKAKKTERQLIMVSATVPFSVVRAAKSWGSDPLLVQAKKIVP 347
Query: 315 EDE------------------------EKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKG 350
+ E L +K Y K L ++A
Sbjct: 348 LETLSPEPVKLSPSSSSTPSVPSKAVVESLPPALKHYYCVVRLQHKVDTLRR--CIHALD 405
Query: 351 GK-TIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDV 408
K IVF K +V L + + LHGD+ + R TL F+ G+ VLV ++
Sbjct: 406 AKFVIVFMNHTKQLKDVVFKLEARGVKAAELHGDLGKLGRSTTLKKFKNGEVRVLVTNEL 465
Query: 409 ASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQ----RRTVRSL 464
++RGLD+ DLV++ +LP D + HR+GRTGR G+ GT + + ++ R+ + L
Sbjct: 466 SARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEESEVFVVRKLKKQL 525
Query: 465 EHDVGC 470
E + C
Sbjct: 526 EIPIAC 531
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 200/437 (45%), Gaps = 80/437 (18%)
Query: 105 ISKLGLPSELVRSLVNR-GITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIK 163
S LGL L L R G + IQ + L G+ + A TGTGKT+A+ PII
Sbjct: 45 FSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIH 104
Query: 164 GVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC---VYGGVAYATQ 220
+ + QR G ALVL PTREL QV + +++ + + GG + + +
Sbjct: 105 HLQSYDKRVQRSDGTF--ALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKE 162
Query: 221 QNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ-- 277
+ L +G+ +++ TPGR++D L N +S T +++++ DEAD++L +GF ++++ IL
Sbjct: 163 KARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLL 222
Query: 278 -TVPTG---------------RQTMLFSATMPGWVKKLSRKYLNKPLTIDL--------- 312
++ TG RQ +L SAT+ V L++ L P+ I +
Sbjct: 223 GSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKIMEPTS 282
Query: 313 --------VGEDEEKLAHGIKLYAVSATTNSKR---------------TMLSDLVTVYAK 349
ED E H K+ A+ A ++ +LS L ++ +
Sbjct: 283 RIRFDNSDCDEDNED-THSSKIPAIGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFER 341
Query: 350 --GGKTIVFTRTKKDADEVSLSLTNSIASEA-------------------LHGDISQHQR 388
K ++F T DA + SL + LHG++ Q R
Sbjct: 342 EPSQKVVLFFST-CDAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMEQEDR 400
Query: 389 ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGT 448
+ F+ K +L++TDV++RGLD PNV +I Y+ P + +VHR GRT R G+ G
Sbjct: 401 TTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGE 460
Query: 449 AILMYTSNQRRTVRSLE 465
++L ++ ++ LE
Sbjct: 461 SLLFLQPSEIDYLQDLE 477
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 199/435 (45%), Gaps = 76/435 (17%)
Query: 105 ISKLGLPSELVRSLVNR-GITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIK 163
S LGL L L R G +Q + L G+ + A TGTGKT+A+ PII
Sbjct: 42 FSSLGLHQTLCDQLRERMGFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIH 101
Query: 164 GVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC---VYGGVAYATQ 220
+ + QR G ALVL PTREL QV + +++ + + GG + + +
Sbjct: 102 HLQSYDKRIQRSDGTF--ALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKE 159
Query: 221 QNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ-- 277
+ L +G+ +++ TPGR++D L N +S T +++++ DEAD++L +GF ++++ IL
Sbjct: 160 KARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLL 219
Query: 278 -TVPTG---------------RQTMLFSATMPGWVKKLSRKYLNKPLTI---DLVGEDEE 318
++ TG RQ +L SAT+ V L++ L P+ I D V E
Sbjct: 220 GSMKTGHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKVLEPTS 279
Query: 319 KL-------------AHGIKLYAVSATTNSKR---------------TMLSDLVTVYAKG 350
K+ + K+ AV A ++ +LS L ++ +
Sbjct: 280 KIRFDNSDCDEDNEGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFERE 339
Query: 351 -GKTIVFTRTKKDADEVSLSLTNSIASEA-------------------LHGDISQHQRER 390
+ IV + DA + SL A LHG++ Q R
Sbjct: 340 PSQKIVLFFSTCDAVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCKTLRLHGNMEQEDRTT 399
Query: 391 TLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAI 450
+ F+ K +L++TDV++RGLD PNV +I Y+ P + +VHR GRT R G+ G ++
Sbjct: 400 SFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESL 459
Query: 451 LMYTSNQRRTVRSLE 465
L ++ ++ LE
Sbjct: 460 LFLQPSEIEYLQDLE 474
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 175/337 (51%), Gaps = 17/337 (5%)
Query: 101 DELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIP 160
DE +S L L + + + G + +Q A L LEGKD++A+AKTGTGKT+AF +P
Sbjct: 108 DECSVSPLSL-----KGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLP 162
Query: 161 IIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTV---CVYGGVAY 217
I+ V S +S LV+ PTRELA+Q E + Y T+ V GG
Sbjct: 163 SIEVVVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKI 222
Query: 218 ATQQNALSRG-VDVVVGTPGRIIDLV---NGNSLRLTEVQYLVLDEADQMLAVGFEEDVE 273
++Q + + ++V TPGR+ D + G + L ++ V+DEAD++L +GF +D+E
Sbjct: 223 VSEQKRIQKNPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIE 282
Query: 274 TILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT-IDLVGEDEEKLAHGIKLYAVSAT 332
I+ +VP RQT++FSAT+P V ++ L K I+ V E E+ ++ + A
Sbjct: 283 EIITSVPKQRQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHLIAP 342
Query: 333 TNSKRTMLSDLVTVYAKGG---KTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQR 388
+ ++LS ++ + K +VF T V+ L + ++ Q R
Sbjct: 343 LDKHFSLLSVILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFR 402
Query: 389 ERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYE 425
R + FR+ K +LV +DV++RG+D P+V LV+ +
Sbjct: 403 NRVSDEFRKSKRLILVTSDVSARGVDYPDVSLVVQVK 439
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 146/284 (51%), Gaps = 19/284 (6%)
Query: 128 PIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAP 187
PIQ + AL G DI+ARAK GTGKT AF IP ++ + D+ Q ++L P
Sbjct: 13 PIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQ--------VVILVP 64
Query: 188 TRELAKQVEKEIKESAPYLS--TVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGN 245
TRELA Q + KE +L + GG + L + V ++VGTPGRI+DL
Sbjct: 65 TRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG 124
Query: 246 SLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLN 305
L + LV+DEAD++L+ F+ +E ++Q +P RQ ++FSAT P VK + +YL
Sbjct: 125 VCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSATFPVTVKDFNDRYLR 184
Query: 306 KPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAK--GGKTIVFTRTKKDA 363
KP I+L+ DE L + YA +R + L T+++K ++I+F +
Sbjct: 185 KPYIINLM--DELTLKGITQFYAFV----EERQKVHCLNTLFSKLQINQSIIFCNSVNRV 238
Query: 364 DEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVAT 406
+ ++ +T + +H + Q R R + FR G LV T
Sbjct: 239 ELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 282
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 192/410 (46%), Gaps = 51/410 (12%)
Query: 98 VSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKD-IIARAKTGTGKTLA 156
+S + + LGL +LV + S IQ V+ AL+GKD +I + +GK A
Sbjct: 1 MSEEMKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGA 60
Query: 157 FGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVA 216
F +PI++ + + P + A VL+P+R+L ++ A Y + GV
Sbjct: 61 FVLPILQALLE--AGPNLNTSF---ACVLSPSRDLVFRI-------AEYFQVLGSQFGVK 108
Query: 217 YAT---------QQNALSRGVDVVVGTPGRI---IDLVNGNSLRLTEVQYLVLDEADQML 264
AT Q N + + ++VGT ++ + L G SL ++YLV+ EAD +L
Sbjct: 109 CATLVEANDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSL--ARLKYLVIHEADLLL 166
Query: 265 AVGFEED-VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHG 323
FEE + IL +P+ R+T LFS+TM V + R L PL ID+ +
Sbjct: 167 NDQFEEQQLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK-------- 218
Query: 324 IKLYAVSATTNSKRT----MLSDLVTVY----AKGGKTIVFTRTKKDADEVSLSLTN-SI 374
Y+ T + ML D VY G K+ VFT+T A ++L L N
Sbjct: 219 ---YSTVVTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDF 275
Query: 375 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFV 434
+ + +SQ ++ LN F+ GKF +L+ ++ A RGLDIP VD+VI+Y +P DP ++
Sbjct: 276 RAIPIISYMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYM 335
Query: 435 HRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
HR G TG + + Y + Q + +E G K P +L
Sbjct: 336 HRVGWTGHVNAAISFVNPYEAGQ---LEMIERHTGKKLPVYPAPCENVLL 382
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 192/410 (46%), Gaps = 51/410 (12%)
Query: 98 VSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKD-IIARAKTGTGKTLA 156
+S + + LGL +LV + S IQ V+ AL+GKD +I + +GK A
Sbjct: 1 MSEEMKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGA 60
Query: 157 FGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVA 216
F +PI++ + + P + A VL+P+R+L ++ A Y + GV
Sbjct: 61 FVLPILQALLE--AGPNLNTSF---ACVLSPSRDLVFRI-------AEYFQVLGSQFGVK 108
Query: 217 YAT---------QQNALSRGVDVVVGTPGRI---IDLVNGNSLRLTEVQYLVLDEADQML 264
AT Q N + + ++VGT ++ + L G SL ++YLV+ EAD +L
Sbjct: 109 CATLVEANDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSL--ARLKYLVIHEADLLL 166
Query: 265 AVGFEED-VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHG 323
FEE + IL +P+ R+T LFS+TM V + R L PL ID+ +
Sbjct: 167 NDQFEEQQLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK-------- 218
Query: 324 IKLYAVSATTNSKRT----MLSDLVTVY----AKGGKTIVFTRTKKDADEVSLSLTN-SI 374
Y+ T + ML D VY G K+ VFT+T A ++L L N
Sbjct: 219 ---YSTVVTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDF 275
Query: 375 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFV 434
+ + +SQ ++ LN F+ GKF +L+ ++ A RGLDIP VD+VI+Y +P DP ++
Sbjct: 276 RAIPIISYMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYM 335
Query: 435 HRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
HR G TG + + Y + Q + +E G K P +L
Sbjct: 336 HRVGWTGHVNAAISFVNPYEAGQ---LEMIERHTGKKLPVYPAPCENVLL 382
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 198/414 (47%), Gaps = 42/414 (10%)
Query: 82 LDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSL-VNRGITSLFPIQRAVLVPALE- 139
++ VN+ GY +P T+ + E +L L EL++ L V G IQ L L
Sbjct: 40 IETVNS-GY--SPYTSAATFE----ELSLSPELLKGLYVEMGFIKPSKIQEITLPMILNP 92
Query: 140 -GKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKE 198
KD+IA+A+ G+GKT F + ++ V + ++PQ AL + PTRELA Q +
Sbjct: 93 PHKDLIAQARNGSGKTTCFVLGMLSRVDPNMKAPQ--------ALCICPTRELAIQNNEV 144
Query: 199 IKESAPY--LSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLV 256
+++ Y +S+ + VV+GTPG I L N L +T ++ LV
Sbjct: 145 LQKMGKYTGISSELAIPSMDKIPPSRRPPIMAQVVIGTPGTINSLKNHKKLGVTRLKILV 204
Query: 257 LDEADQMLA-VGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGE 315
DEADQMLA + +D LQ +LFSAT VK + + + K + +
Sbjct: 205 FDEADQMLAQMMVTKDWLVFLQV-------LLFSATFDDTVKNFATRIVAKKEHNEYFVK 257
Query: 316 DEEKLAHGIKLYAVSATTN-SKRTMLSDLVTVYAKG-GKTIVFTRTKKDADEVSLSLTN- 372
EE +K Y V T +K ++ D + + G+TI+F RT+ A + SL +
Sbjct: 258 KEELSLEAVKQYKVKCTDELAKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKSLVDF 317
Query: 373 SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELP----- 427
++ G + +R+ + F+ G VL++TDV SRG D V+LVI+Y+LP
Sbjct: 318 GYEVTSIQGALQTEERDTIIKEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTR 377
Query: 428 -----NDPETFVHRSGRTGRAGKEGTAI-LMYTSNQRRTVRSLEHDVGCKFEFV 475
D E ++HR GR GR G++G L+ +++ + +E G E V
Sbjct: 378 GQEPEPDCEVYLHRVGRAGRFGRKGAVFNLICHESEQMVMSKIEEHFGIHVEEV 431
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 189/403 (46%), Gaps = 51/403 (12%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKD-IIARAKTGTGKTLAFGIPIIK 163
+ LGL +LV + S IQ V+ AL+GKD +I + +GK AF +PI++
Sbjct: 4 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 63
Query: 164 GVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYAT---- 219
+ + P + A VL+P+R+L ++ A Y + GV AT
Sbjct: 64 ALLE--AGPNLNTSF---ACVLSPSRDLVFRI-------AEYFQVLGSQFGVKCATLVEA 111
Query: 220 -----QQNALSRGVDVVVGTPGRI---IDLVNGNSLRLTEVQYLVLDEADQMLAVGFEED 271
Q N + + ++VGT ++ + L G SL ++YLV+ EAD +L FEE
Sbjct: 112 NDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSL--ARLKYLVIHEADLLLNDQFEEQ 169
Query: 272 -VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVS 330
+ IL +P+ R+T LFS+TM V + R L PL ID+ + Y+
Sbjct: 170 QLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK-----------YSTV 218
Query: 331 ATTNSKRT----MLSDLVTVY----AKGGKTIVFTRTKKDADEVSLSLTN-SIASEALHG 381
T + ML D VY G K+ VFT+T A ++L L N + +
Sbjct: 219 VTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIIS 278
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
+SQ ++ LN F+ GKF +L+ ++ A RGLDIP VD+VI+Y +P DP ++HR G TG
Sbjct: 279 YMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTG 338
Query: 442 RAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
+ + Y + Q + +E G K P +L
Sbjct: 339 HVNAAISFVNPYEAGQ---LEMIERHTGKKLPVYPAPCENVLL 378
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 189/403 (46%), Gaps = 51/403 (12%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKD-IIARAKTGTGKTLAFGIPIIK 163
+ LGL +LV + S IQ V+ AL+GKD +I + +GK AF +PI++
Sbjct: 4 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 63
Query: 164 GVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYAT---- 219
+ + P + A VL+P+R+L ++ A Y + GV AT
Sbjct: 64 ALLE--AGPNLNTSF---ACVLSPSRDLVFRI-------AEYFQVLGSQFGVKCATLVEA 111
Query: 220 -----QQNALSRGVDVVVGTPGRI---IDLVNGNSLRLTEVQYLVLDEADQMLAVGFEED 271
Q N + + ++VGT ++ + L G SL ++YLV+ EAD +L FEE
Sbjct: 112 NDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSL--ARLKYLVIHEADLLLNDQFEEQ 169
Query: 272 -VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVS 330
+ IL +P+ R+T LFS+TM V + R L PL ID+ + Y+
Sbjct: 170 QLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK-----------YSTV 218
Query: 331 ATTNSKRT----MLSDLVTVY----AKGGKTIVFTRTKKDADEVSLSLTN-SIASEALHG 381
T + ML D VY G K+ VFT+T A ++L L N + +
Sbjct: 219 VTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIIS 278
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
+SQ ++ LN F+ GKF +L+ ++ A RGLDIP VD+VI+Y +P DP ++HR G TG
Sbjct: 279 YMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTG 338
Query: 442 RAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
+ + Y + Q + +E G K P +L
Sbjct: 339 HVNAAISFVNPYEAGQ---LEMIERHTGKKLPVYPAPCENVLL 378
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 189/403 (46%), Gaps = 51/403 (12%)
Query: 105 ISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKD-IIARAKTGTGKTLAFGIPIIK 163
+ LGL +LV + S IQ V+ AL+GKD +I + +GK AF +PI++
Sbjct: 4 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 63
Query: 164 GVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYAT---- 219
+ + P + A VL+P+R+L ++ A Y + GV AT
Sbjct: 64 ALLE--AGPNLNTSF---ACVLSPSRDLVFRI-------AEYFQVLGSQFGVKCATLVEA 111
Query: 220 -----QQNALSRGVDVVVGTPGRI---IDLVNGNSLRLTEVQYLVLDEADQMLAVGFEED 271
Q N + + ++VGT ++ + L G SL ++YLV+ EAD +L FEE
Sbjct: 112 NDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSL--ARLKYLVIHEADLLLNDQFEEQ 169
Query: 272 -VETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVS 330
+ IL +P+ R+T LFS+TM V + R L PL ID+ + Y+
Sbjct: 170 QLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK-----------YSTV 218
Query: 331 ATTNSKRT----MLSDLVTVY----AKGGKTIVFTRTKKDADEVSLSLTN-SIASEALHG 381
T + ML D VY G K+ VFT+T A ++L L N + +
Sbjct: 219 VTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIIS 278
Query: 382 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 441
+SQ ++ LN F+ GKF +L+ ++ A RGLDIP VD+VI+Y +P DP ++HR G TG
Sbjct: 279 YMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTG 338
Query: 442 RAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
+ + Y + Q + +E G K P +L
Sbjct: 339 HVNAAISFVNPYEAGQ---LEMIERHTGKKLPVYPAPCENVLL 378
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 190/412 (46%), Gaps = 55/412 (13%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
+G ++ SL N +T IQ P + GK I ++G+GKTLA+ +PII+ +
Sbjct: 136 IGCADFMIESLHNLSLTRPSNIQAMSFPPVIAGKSCIIADQSGSGKTLAYLVPIIQRLRQ 195
Query: 168 DS-QSPQRRSGRLPKALVLAPTRELAKQV---EKEIKESA--PYLSTVCVYGGVAYATQQ 221
Q + S + P L+LAPT ELA QV + I +S P+ S + V GG TQ
Sbjct: 196 QELQGLHKSSSQSPTLLILAPTAELASQVFHNCRSISKSGVVPFKSML-VTGGFRQKTQL 254
Query: 222 NALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLA-VGFEEDVETILQTVP 280
+ L++GVDV++ TPGR + L+N L LT + VLDE D + FE+ ++ ++ + P
Sbjct: 255 DTLNQGVDVLIATPGRFLFLINQGFLHLTNLTCAVLDEVDILFGDEDFEKALQCLISSSP 314
Query: 281 TGRQTMLFSATMPGWV-KKL-------------SRKYLNKPL---TIDLVGED-EEKLAH 322
Q + +AT+P V KL S +N L +D GED +EK
Sbjct: 315 VDTQYLFVTATLPKNVYSKLVEVFPDCEMVMGPSMHRINSRLEEIIVDCSGEDGQEKTLD 374
Query: 323 GIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLT----NSIASEA 378
+A N K +L + + +TIVF + +V +L I +
Sbjct: 375 -------TAFLNKKAALLQ--LAEKNRVPRTIVFCNKIETCRKVENALNRFDRKGIRMQV 425
Query: 379 L--HGDISQHQRERTLNGFRQGK----FTVLVATDVASRGLDIPNVDLVIHYELPNDPET 432
L H ++Q R ++ F + +V TD ASRG+D VD VI ++ P DP
Sbjct: 426 LPFHAAMTQESRLASMKEFTRSPPKELSQFMVCTDRASRGIDFTRVDHVILFDYPRDPSE 485
Query: 433 FVHRSGRTGRAGK-EGTAILMYTSNQRRTVRSLE---------HDVGCKFEF 474
+V R GRT R + +G A + Q R + HDV +E+
Sbjct: 486 YVRRVGRTARGARGQGKAFIFVVGKQVSLARKVMERNRKGHPLHDVPSAYEY 537
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 165/336 (49%), Gaps = 34/336 (10%)
Query: 133 VLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELA 192
V+ P +G D+I + +GTG + F I I+K + + Q ALVLAPT ELA
Sbjct: 2 VIPPFCKGHDVILQDPSGTGMSATFCIGILKMLDYELAHCQ--------ALVLAPTNELA 53
Query: 193 KQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEV 252
Q+++ +++ + + + +A G+ V R + +
Sbjct: 54 LQIKQVMQDLGQF-----------HGVRIHACVGGISAPVEDLQRFMQVFT--------- 93
Query: 253 QYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDL 312
+V+DE D+ML+ FEE ++ I Q +P Q + S+TMP +++RK++ KP+TI
Sbjct: 94 LLVVMDEVDEMLSCDFEEKIDKIFQLLPYKIQVGVISSTMPPEALEITRKFMKKPVTIQ- 152
Query: 313 VGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKT--IVFTRTKKDADEVSLSL 370
DE GIK + V+ + ++ L L +Y T IVF T++ D + +
Sbjct: 153 AKRDELTTLEGIKQFYVNV--DEEKWKLETLYDIYTTKFITHCIVFVNTERKVDWLMDKM 210
Query: 371 TNSIASE-ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPND 429
+ + +H D+ Q+ R+ + F+ G +L+ TD GLD+ V LVI+Y+LP
Sbjct: 211 RSRYYTVLTIHDDMDQNTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTL 270
Query: 430 PETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLE 465
PE ++HR GR G++G AI T + R + ++
Sbjct: 271 PENYLHRICHKGRFGRKGVAINFVTLDDFRMLSDIQ 306
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 157/284 (55%), Gaps = 12/284 (4%)
Query: 188 TRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID-LVNGNS 246
T E+A+++ K + S + V GG A T+ +L++G+++VV TPGR++D L N
Sbjct: 2 THEVAQKLLKHHRHSQ---TLGLVIGGSARRTEAESLAKGINIVVATPGRLLDHLQNTKR 58
Query: 247 LRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSR-KYLN 305
++ L++DEAD++L FE++++ I++ +P RQT LFSAT V+ L+R +
Sbjct: 59 FIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKKVEDLARLSFQT 118
Query: 306 KPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADE 365
P+ ID V + +K+ + L +KR M+ K K +VF + ++ +
Sbjct: 119 TPIYID-VDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHKSKKVMVFF-SSCNSVK 176
Query: 366 VSLSLTNSIA--SEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIH 423
+ N I +++G Q R T F Q + +L+ TDVA+RGLDIP+VD ++
Sbjct: 177 FHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWILQ 236
Query: 424 YELPNDPETFVHRSGRTGRA--GKEGTAILMYTSNQRRTVRSLE 465
Y+ P++P+ ++HR GRT R GK G A+L + + +R L+
Sbjct: 237 YDPPDEPKEYIHRVGRTARGEDGK-GNALLFLIPEELQFLRYLK 279
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 177/361 (49%), Gaps = 46/361 (12%)
Query: 141 KDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIK 200
+D+IA+A G+GKT F + ++ V + Q+PQ AL + PTRELA Q + ++
Sbjct: 120 RDLIAQAHNGSGKTTCFNLGMLSRVDPNLQAPQ--------ALCICPTRELAIQNIEVLR 171
Query: 201 ESAPY--LSTVCVYGGVAYATQQN--ALSRG---VDVVVGTPGRIIDLVNGNSLRLTEVQ 253
+ Y +S+ C V + + + R VV+GTPG + +L+ L +T+++
Sbjct: 172 KMGKYTGISSEC---AVPMDRRDSIPVMKRAPIMAQVVIGTPGTMKNLITYKKLGVTKLK 228
Query: 254 YLVLDEADQMLAV-GFEEDVETILQTVP---TGRQTMLFSATMPGWVKKLSRKYLNKPLT 309
LV DEADQMLA GF +D I++ + + Q +LFSAT VK + + + K
Sbjct: 229 ILVFDEADQMLAEDGFRDDSLRIIKEIEKFNSSCQVLLFSATFNETVKNFATRVVGKKEH 288
Query: 310 IDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVY-----AKGGKTIVFTRTKKDAD 364
+L + EE +K Y V + D++ Y G+TI+F RT+ A
Sbjct: 289 NELFVKKEELSLDAVKQYKVLVPDELVKI---DVIKNYIFELGENVGQTIIFVRTRNSAK 345
Query: 365 EVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIH 423
+ +L + ++ G + R++ + F+ G VL++TDV +RG D V+LVI+
Sbjct: 346 MLHKALVDLGYEVTSIQGALDHVDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVIN 405
Query: 424 YELP--------------NDPETFVHRSGRTGRAGKEGTAI-LMYTSNQRRTVRSLEHDV 468
Y+LP D E ++HR GR GR G++G L+ +T+ +E
Sbjct: 406 YDLPLKYAAEYTHGHEQEPDYEVYLHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHF 465
Query: 469 G 469
G
Sbjct: 466 G 466
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 210/462 (45%), Gaps = 100/462 (21%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAV----LVPALEGKDIIARAKTGTGKTLAFGIPIIKGV 165
L +L +L + GI++LFP+Q AV + P +DI + TG+GKTLA+ +P++
Sbjct: 35 LHPKLKSALEDMGISNLFPVQVAVWHETVGPGNFERDICVNSPTGSGKTLAYALPLV--- 91
Query: 166 TDDSQSPQRRSGRLPK---ALVLAPTRELAKQVEKEIKESAPYLSTVCVYG--------- 213
Q SGR+ K ALV+ PTR+LA QV++ A L
Sbjct: 92 -------QMLSGRVTKCLRALVVVPTRDLALQVKQVFDAVASPLGLRVGLAVGQSSLADE 144
Query: 214 ------------GVAYATQQNALSR---GVDVVVGTPGRIIDLVNGN-SLRLTEVQYLVL 257
G Y +L R VD++V TPGR++D +N L + YLV+
Sbjct: 145 ISELVEMPARDIGTCYDPHCISLPRFQSKVDILVATPGRLMDHINTTIGFTLEHLYYLVV 204
Query: 258 DEADQMLAVGFEEDVETILQTV-------------------------------------P 280
DE D++L ++ + T+L+ + P
Sbjct: 205 DETDRLLREAYQSWLPTVLELIQSNDDGFSLPSASFFPCSASALRTRRRCGVERGFKDKP 264
Query: 281 TGR-QTMLFSATM---PGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSK 336
R M+ SAT+ PG + +L+ L+ PL + G+ +L ++ Y + K
Sbjct: 265 YPRLAKMVLSATLTQDPGRLIQLN---LHHPLLLK-AGQMRYRLPENLESYKLICEKKVK 320
Query: 337 RTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDIS-----QHQRER- 390
L L+ + K +VFT++ D+ L N E L DI QHQR R
Sbjct: 321 PLYLIALLKSLGEE-KCLVFTKSV-DSTHRLCQLLNCF--EDLRIDIKEYSSLQHQRVRS 376
Query: 391 -TLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTA 449
TLN FR+G F VL+++D +RG+D+ V VI+Y++P +T VHR+GRT RAG+ G
Sbjct: 377 KTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTARAGQTGRC 436
Query: 450 ILMYTSNQRRTVRSL--EHDVGCKFEFVSPPATQEILESSAE 489
+ + ++ R + L + + G + + P + E L ++ E
Sbjct: 437 FTLMSEDEVRRFKKLIGKAEGGSCLDHIVPSSQIEALNTTYE 478
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 149/291 (51%), Gaps = 16/291 (5%)
Query: 178 RLPKALVLAPTRELAKQV---EKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGT 234
+ P+A+VL PTREL++QV K I A + T+ V GG Q+ +LS +D+VVGT
Sbjct: 9 KRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTM-VSGGGRLRPQEESLSNPIDMVVGT 67
Query: 235 PGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPT--------GRQTM 286
PGRI+ + ++ ++QY+VLDEAD M GF D++ L + G QT+
Sbjct: 68 PGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHRASKPDSLGFQTV 127
Query: 287 LFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTV 346
L +ATM V+ L + + + ++ +S T N ++L L
Sbjct: 128 LVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKLSGTENKLDSLLQVLEPS 187
Query: 347 YAKGGKTIVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGK--FTVL 403
AKG + +VF T + V L N I++ HG++ QR LN F+ L
Sbjct: 188 LAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNKFKSNNDDCPTL 247
Query: 404 VATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT 454
V TD+A+RGLD+ +VD VI ++ P + ++HR+GRT R G +G + T
Sbjct: 248 VCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVT 297
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 170/364 (46%), Gaps = 58/364 (15%)
Query: 129 IQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPT 188
IQ+ V+ P EG +I + GTG F I I+K + Q ALVLAPT
Sbjct: 16 IQQRVIAPFCEGLGVILQDPYGTGMLETFCIGILKKLDYGLVHCQ--------ALVLAPT 67
Query: 189 RELAKQVEKEIKESAPYLST---VCVYG------------GVAYATQ------------- 220
EL Q+++ +++ + CV G V Y +
Sbjct: 68 MELVLQIKEVMQDLGRFHGVKIHACVGGTSVPKEDRQRFLKVGYNSYIVEGTSNVYDIID 127
Query: 221 ---QNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ 277
Q GV ++VGTP + D++ RL ++ V+DE DQML++GF++ ++ I +
Sbjct: 128 MDGQFIFKGGVHIIVGTPRCVYDMLQRGRTRLDCIKMFVMDEVDQMLSLGFKDKIDEIFK 187
Query: 278 TVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNS-K 336
+P Q + SATMP +++RK++ KP+TI + +E GIK + V K
Sbjct: 188 LLPCKIQVGVISATMPPEALEITRKFMKKPVTIQ--AKPDELTLEGIKQFYVDVEKEEWK 245
Query: 337 RTMLSDL--VTVYAKG-GKTIVFTRTKKDADEVSLSLTNSIASE-----ALHGDISQHQR 388
L D+ +TV AK IVF T+ D LT+ + S + D+ Q+ R
Sbjct: 246 LETLCDIFELTVKAKSITHCIVFVDTRCKVD----WLTDKMQSRDHKVSVIQSDMDQNTR 301
Query: 389 ERTLNGF--RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 446
+ + F + G VL+ TD G D+ V L+++Y+LP PE +++R GR R+G+
Sbjct: 302 DIIVREFFSQSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLYRIGR--RSGQF 359
Query: 447 GTAI 450
G +
Sbjct: 360 GRCV 363
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 19/213 (8%)
Query: 99 SNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFG 158
++ + S LGL +VR G+ S P+QR + LEG+ +I KTG+GKT AF
Sbjct: 245 NDKHMSFSDLGLSEWMVRGCDKLGMQSPRPVQRHCIPKVLEGRHVIGIDKTGSGKTAAFA 304
Query: 159 IPIIKGVTDDSQSPQRRSGRLPK---ALVLAPTRELAKQVEKE--IKESAPYLSTVCVYG 213
+PI++ R G P ALVL PTRELA Q+ + I S+ L V G
Sbjct: 305 LPILQ-----------RLGETPFGVFALVLTPTRELAVQLAHQFWILGSSLRLILTVVVG 353
Query: 214 GVAYATQQNALSRGVDVVVGTPGRIIDLVNGN---SLRLTEVQYLVLDEADQMLAVGFEE 270
G+ Q L ++V+ TP R+ L+ N + ++LVLDEADQ+L VGF+E
Sbjct: 354 GLDKRIQAKQLVARPNLVIATPERLKILLQDNPEIAPIFAATKFLVLDEADQLLDVGFQE 413
Query: 271 DVETILQTVPTGRQTMLFSATMPGWVKKLSRKY 303
+++ I Q +P RQ + FSATM ++K+ Y
Sbjct: 414 ELKVIFQCLPENRQNLFFSATMTSNLQKMCDCY 446
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 24/200 (12%)
Query: 103 LDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPII 162
+ S LGL V++ G+ + +Q+ + LEG+D++ +TG+GKT AF +PI+
Sbjct: 1 MSFSDLGLSEWTVQNCKKLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPIL 60
Query: 163 KGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQN 222
+ + + + G ALVL PTRELA Q+ + A +
Sbjct: 61 QRLAEHPKP----FGVYVFALVLTPTRELAIQLADQF-----------------LALGSS 99
Query: 223 ALSRGVDVVVGTPGRIIDLVNGN---SLRLTEVQYLVLDEADQMLAVGFEEDVETILQTV 279
L +V+ TP R+ L+ N + ++LVLDEADQ+L VGF +++ I+Q +
Sbjct: 100 LLPTSPHLVIATPERLRVLLLDNPEIATIFATTKFLVLDEADQLLDVGFRDELNVIVQCL 159
Query: 280 PTGRQTMLFSATMPGWVKKL 299
P RQ + FS TM +KK+
Sbjct: 160 PENRQNLFFSETMTSNLKKM 179
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 160/350 (45%), Gaps = 70/350 (20%)
Query: 186 APTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIID-LVNG 244
AP L ++ +++ ++ + GG + + ++ L +G+ +++ TPGR++D L N
Sbjct: 7 APMEHLVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLLDHLKNT 66
Query: 245 NSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ---TVPTG---------------RQTM 286
+S T +++++ DEAD++L +GF ++++ IL ++ TG RQ +
Sbjct: 67 SSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQGNGVPRPTKFQRQNL 126
Query: 287 LFSATMPGWVKKLSRKYLNKPLTI---DLVGEDEEKL-------------AHGIKLYAVS 330
L SAT+ V L++ L P+ I D V E K+ + K+ AV
Sbjct: 127 LLSATLNEKVNHLAKISLEDPVMIGIDDKVLEPTSKIRFDNSDCDEDNEGTYSSKIPAVG 186
Query: 331 ATTNSKR---------------TMLSDLVTVYAKG-GKTIVFTRTKKDADEVSLSLTNSI 374
A ++ +LS L ++ + + IV + DA + SL
Sbjct: 187 AYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKIVLFFSTCDAVDFHYSLLTEF 246
Query: 375 ASEA-------------------LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDI 415
A LHG++ Q R + F+ K +L++TDV++RGLD
Sbjct: 247 LFSAFPQTEEGNRPMFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDF 306
Query: 416 PNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLE 465
PNV +I Y+ P + +VHR GRT R G+ G ++L ++ ++ LE
Sbjct: 307 PNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPSEIEYLQDLE 356
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 129/256 (50%), Gaps = 9/256 (3%)
Query: 250 TEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT 309
+++Q LVLDEAD++L GF++++ I+ +P RQTMLFSAT V+ L+R L P
Sbjct: 10 SKMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEY 69
Query: 310 IDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDAD---EV 366
I + E +K + + K ML + + + K KT+VF + K E
Sbjct: 70 ISVHEESVTATPTLLKQKVMIVPLDQKLDMLWNFIKTHLK-SKTLVFLSSCKQVKFVFEA 128
Query: 367 SLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPN-VDLVIHYE 425
L I + LHG + Q +R + F + K ++L ATDVA+RGLD VD V+ +
Sbjct: 129 FKKLHPGIPLKCLHGRMKQEKRMAIYSEFCE-KCSILFATDVAARGLDFNRAVDWVVQVD 187
Query: 426 LPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEILE 485
P + +++HR GRT R G ++L ++ + + LE K PP ++ L
Sbjct: 188 CPENVASYIHRVGRTARYKSLGKSVLYLLPSETKMLEKLE---AGKVPVHYPPKPRKELL 244
Query: 486 SSAEQVVAALSRVHPE 501
++A+L +PE
Sbjct: 245 QPVSSLLASLLVKYPE 260
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 110/201 (54%), Gaps = 13/201 (6%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---D 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
P + S ALVL TRELA Q+ E + + YL + V YGGV ++ L
Sbjct: 110 PVPGQVS-----ALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGRI+ L +L L V++ VLDE D+ML ++ +DV+ I + P +Q
Sbjct: 165 ECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKYLN 305
M+FSAT+ ++ + +K++
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQ 245
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 110/201 (54%), Gaps = 13/201 (6%)
Query: 110 LPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDS 169
L EL+R++V+ G +Q + A+ G D+I +AK+G GKT F + ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI---D 109
Query: 170 QSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVAYATQQNALSR 226
P + S ALVL TRELA Q+ E + + YL + V YGGV ++ L
Sbjct: 110 PVPGQVS-----ALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKN 164
Query: 227 GV-DVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQTVPTGRQ 284
+VVGTPGRI+ L +L L V++ VLDE D+ML ++ +DV+ I + P +Q
Sbjct: 165 ECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQ 224
Query: 285 TMLFSATMPGWVKKLSRKYLN 305
M+FSAT+ ++ + +K++
Sbjct: 225 VMMFSATLSKEIRPVCKKFMQ 245
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 250 TEVQYLVLDEADQMLAVGFEEDVETILQTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLT 309
+++Q LVLDEAD++L GF+++V I+ +P RQTMLFSAT V+ L+R L P
Sbjct: 10 SQMQVLVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEY 69
Query: 310 IDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDAD---EV 366
I + E +K + + K ML + + + KT+VF + K EV
Sbjct: 70 ISVHEESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQ-SKTLVFLSSCKQVKFVFEV 128
Query: 367 SLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPN-VDLVIHYE 425
L I + LHG + Q +R + F + K +VL +TDVA+RGLD VD V+ +
Sbjct: 129 FKKLHPGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVD 188
Query: 426 LPNDPETFVHRSGRTGRAGKEGTAILM 452
P + +++HR GRT R G ++L
Sbjct: 189 CPENVASYIHRVGRTARYNSVGKSVLF 215
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 156/382 (40%), Gaps = 100/382 (26%)
Query: 129 IQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPT 188
IQ V+ ALEGKD+ A + +GKT AF +PI + AL A
Sbjct: 29 IQAQVIPLALEGKDVYAISPPRSGKTGAFVLPIFQ------------------ALNFA-- 68
Query: 189 RELAKQVEKEIKESAPYLSTVCVYGGVAYAT---------QQNALSRGVDVVVGTPGRII 239
E A Y + + GV +A Q N + + ++V TPG+++
Sbjct: 69 -----------FEIARYFEALGQHFGVKFAVLVSTSDMEYQTNKILQQPHIIVATPGKLV 117
Query: 240 -DLVNGNSLRLTEVQYLVLDEADQMLAVGFEE---DVETILQTVPTGRQTMLFSATMPGW 295
L + + L +++YLVLDEA +L ++ +E IL +P R T LFS +
Sbjct: 118 KHLKDTPAFSLRKLKYLVLDEA-HLLESNYKHIDRQLEFILGKIPRNRTTFLFSDSKTDK 176
Query: 296 VKKLSRKYLNKPL----TIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGG 351
V + +L P+ +I+ + + + K+Y + N
Sbjct: 177 VDMIQSVFLRNPVKIDESIEYPEQQQCHMPAKDKVYPLPCPKNI---------------- 220
Query: 352 KTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASR 411
+SQ +R LN F+ G +L+ D+ASR
Sbjct: 221 -------------------------------VSQAKRLEALNAFKSGNCKILLCNDLASR 249
Query: 412 GLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVGCK 471
GLDIP VD VI+Y++P+DP ++H G+A G AI + N+ R +E +G K
Sbjct: 250 GLDIPAVDTVINYDIPDDPRDYMH---HVGQAAPTGVAISFVSPNEARWFEMIETHIGKK 306
Query: 472 FEFVSPPATQEILESSAEQVVA 493
V +E+L S VA
Sbjct: 307 LP-VYQAQIEEVLRFSNRVSVA 327
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 183/438 (41%), Gaps = 81/438 (18%)
Query: 116 RSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRR 175
R+LV + IQ + L G D+ A + G+GKTLA+ IP + + + P
Sbjct: 30 RTLVKFQAARMTSIQAKAIPLLLRGDDLAAYSSNGSGKTLAYLIPALDHLCKNKYEPD-- 87
Query: 176 SGRLPKALVLAPTRELAKQVEKEI----KESAPYLSTVCVYGGVAYATQQNALSRGVDVV 231
G + +VL P +A Q++++I K+S L T+ G A+ + R +++
Sbjct: 88 DGII--VMVLCPNTMVAIQIDRDIKTILKDSPQTLQTI----GRLIASPGDRYVRK-NLL 140
Query: 232 VGTPG--RIIDLVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQTVPTGR-QTMLF 288
+ TP R + ++ ++++L+ D+ +L ++ + P + Q +F
Sbjct: 141 IATPAGLRYHHAYDPERIKYDKLKFLIFDDPYLILRFSDQKKWNWVRSNFPKEQLQIAIF 200
Query: 289 SATMPGWVKKLSRKYL-------NKPLTIDLVGEDEEK-----------------LAHGI 324
S T KL R+ L +P ++ E + + I
Sbjct: 201 SVT------KLKRECLLRLLPEGRRPGDFSVIDEVQNRQWVTNDRLEQEFILVPCAKRLI 254
Query: 325 KLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDIS 384
LY + TT SK+ M + F+ T+ L + +HGD +
Sbjct: 255 TLYIMLKTTKSKKVM--------------VFFSTTESVKFHEELFTFLDVKCYGVHGDQT 300
Query: 385 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 444
+ + F + +L+ T++A+ GL+IP+VDL++ Y+ P DPE ++H+ GRT R
Sbjct: 301 VSEHSKIYYSFSNAEEMILLCTNIAAFGLNIPDVDLIVQYDPPIDPEEYIHKVGRTARGT 360
Query: 445 KEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL-------ESSAEQVVAALSR 497
++G A+L ++ R F+S T ++L E A V + L R
Sbjct: 361 RKGNALLFLMPHELR--------------FISFMKTHKVLIREHMFDEKMAPNVGSYLLR 406
Query: 498 VHPESVEFFTATAQKLVE 515
+ E+ E + +E
Sbjct: 407 LVAETEELMEMATKAYIE 424
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 25/211 (11%)
Query: 105 ISKLGLPSELVRSLVNR-GITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIK 163
S LGL L L R G + IQ + L G+ + A TGTGKT+A+ PII
Sbjct: 42 FSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIH 101
Query: 164 GVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC---VYGGVAYATQ 220
+ + QR G ALVL PTREL QV + +++ + + GG + + +
Sbjct: 102 HLQSYDKRVQRSDGTF--ALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKE 159
Query: 221 QNALSRGVDVVVGTPGRIID-LVNGNSLRLTEVQYLVLDEADQMLAVGFEEDVETILQ-- 277
+ L +G+ +++ TPGR++D L N +S T +++++ DEAD++L +GF ++++ IL
Sbjct: 160 KARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLL 219
Query: 278 -TVPTG---------------RQTMLFSATM 292
++ TG RQ +L SAT+
Sbjct: 220 GSMKTGHDDQESGVPRPSKFQRQNLLLSATL 250
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 171/390 (43%), Gaps = 52/390 (13%)
Query: 92 LAPPT----TVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARA 147
+ PPT TV + + +P +L++ + G P+Q+ L G+D I A
Sbjct: 66 IIPPTADDDTVPITLRQLCQSHVPDQLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHA 125
Query: 148 KTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLS 207
+TG+GKTLA+ + I ++ S Q ALVL PTREL QV K + A +
Sbjct: 126 QTGSGKTLAYLLLIYSIISTRKSSFQ--------ALVLVPTRELGMQVTKVARILAAKPT 177
Query: 208 TV------CVY-----GGVAYATQQNALSRGVDVVVGTPGRIIDLVNGNSLRLTEVQYLV 256
V C GG + + +VV T + ++ L ++ LV
Sbjct: 178 GVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGNLRVLV 237
Query: 257 LDEADQMLAVGFE-EDVETILQTVPT--GRQTMLFSATMPGWVKKLSRKYLNKPLTIDLV 313
+DE D + + + IL + + RQT+ SA++P + L+ K D++
Sbjct: 238 VDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNQFLNEAVQQKWTKRDVI 297
Query: 314 GED-------EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFT-----RTKK 361
+L+H + V +T+LS + + + G I+F ++KK
Sbjct: 298 HIHVSPVEPMPSRLSHR---FIVCDIKRKLQTLLSLIQSDAPESG--IIFVSEQSEKSKK 352
Query: 362 DADEVSLSLTNSIASEALHG---------DISQHQRERTLNGFRQGKFTVLVATDVASRG 412
+ S SL + HG D++ + R +L R+G +LVATDVA+RG
Sbjct: 353 AGNSPSTSLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARG 412
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
+D P + + +Y+LP ++HR+GRT R
Sbjct: 413 VDFPEMTHIYNYDLPKTAIDYLHRAGRTCR 442
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 150/355 (42%), Gaps = 53/355 (14%)
Query: 122 GITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTDDSQSPQRRSGRLPK 181
G S P QR V+ +E +D + TG+GK+L + +P + +++G +
Sbjct: 13 GFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPL---------VVKKTGIVVS 63
Query: 182 ALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDL 241
L+ ++ ++ IK A YLS+ Y Q A D++ TP + +
Sbjct: 64 PLISLMQDQVMALKQRGIK--AEYLSS----AQKDYTVQSKAERGQFDILFMTPEKACTI 117
Query: 242 VNG--NSLRLTEVQYLVLDEADQMLAVGFEEDVET--------ILQTVP------TGRQT 285
++L + +DEA + G + VE +L VP T +
Sbjct: 118 PTSFWSNLLKEGISLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEK 177
Query: 286 MLFSATMPGWVKKLSRKYLNKPLTIDLVGE-DEEKLAHGIKLYAVSATTNSKRTMLSDLV 344
+ F T + +N P + VG D L +G+K + N ++ + +LV
Sbjct: 178 VRFDIT--------NSLKMNNPYVV--VGSFDRPNLFYGVKQF------NRGQSFIDELV 221
Query: 345 TVYAK----GGKTIVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGK 399
+K G TI++ T KD +++ SLT I + HG + RE + F + +
Sbjct: 222 EEVSKEVANGCSTIIYCTTIKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDE 281
Query: 400 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYT 454
++VAT G+D PN+ VIHY P + E++ SGR GR G L YT
Sbjct: 282 MQIMVATIAFGMGIDKPNIRKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYT 336
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 108 LGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVTD 167
LGL LV + G + IQ + AL+GKD+I ++TG+GKT AF +PI+ + D
Sbjct: 14 LGLDELLVEAFEKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSGKTGAFALPILHALLD 73
Query: 168 DSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVAYATQQNALS 225
+P R G A V++PTRELA QV ++ + + C + G + Q ++
Sbjct: 74 ---AP--RHGFF--ACVISPTRELAYQVPEQFEALGSEIGVKCAVLVGQMDMVQQSIEIA 126
Query: 226 RGVDVVVGTPGRIID-LVNGNSLRLTEVQYLV 256
+G D+ VGTPGR++D L N L ++YLV
Sbjct: 127 KGPDIFVGTPGRVLDHLKNTKGFSLDRLKYLV 158
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 286 MLFSATM---PGWVKKLSRKYLNKPLTIDLVGEDEEKLAHGIKLYAVSATTNSKRTMLSD 342
M+ SAT+ PG + +L+ L+ PL + G+ +L ++ Y + K L
Sbjct: 87 MVLSATLTQDPGRLIQLN---LHHPLLLK-AGQMRYRLPENLESYKLICEKKVKPLYLIA 142
Query: 343 LVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDIS-----QHQRER--TLNGF 395
L+ + K +VFT++ D+ L N E L DI QHQR R TLN F
Sbjct: 143 LLKSLGEE-KCLVFTKSV-DSTHRLCQLLNCF--EDLRIDIKEYSSLQHQRVRSKTLNEF 198
Query: 396 RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
R+G F VL+++D +R +D+ V VI+Y++P +T+VHR+GRT RA + G + +
Sbjct: 199 RKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRCFTLMSE 258
Query: 456 NQRRTVRSL--EHDVGCKFEFVSPPATQEILESSAEQVVAALSRV 498
++ R + L + + G + + P + E L ++ E + +
Sbjct: 259 DEVRRFKKLIGKAEGGSCLDHIVPSSQIEALNTTYESALTKYKEI 303
>Medtr1g102425.1 | GUCT (NUC152) domain protein | HC |
chr1:46259228-46254943 | 20130731
Length = 374
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 336 KRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNSIASEALHGDISQHQRERTLNGF 395
+ ++ D++ Y+ G+TI+FT TK+ A +++ L + AL+GDI Q QRE
Sbjct: 74 RSQLIPDIIRCYSSEGQTIIFTETKESASQLAELLH---GARALNGDIQQAQRE------ 124
Query: 396 RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTS 455
+ + VA++ L I +V L+I E P D + +HRSGRTG AG G +++Y
Sbjct: 125 -VWEIHDISCHVVAAQDLYINDVQLIIQCEPPRDVKANIHRSGRTGSAGNTGVVVMLYDP 183
Query: 456 NQRRTVRSLEHDVGCKFEFVSPPATQEILESSAEQVVAALSRVHPESVEFFTATAQKLVE 515
+R + +E V A +E+L +S VV ++ + V + Q +
Sbjct: 184 -RRSNIPKIESQVSDSVIPAFKSAAEELLNNSGLSVVDLFAKALAKVVVSLSCNLQGYTD 242
Query: 516 ERGTSVLAA 524
+ S+L +
Sbjct: 243 IKKRSLLTS 251
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
+SQ ++ R+LN F+ G++ +L+ +D S+GLDIP VD+VI+Y +P P+ +++R G T
Sbjct: 178 MSQAKKLRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINYNIPRYPKDYIYRVGWT-- 235
Query: 443 AGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
A AI + ++RR +E +G K P + +L
Sbjct: 236 AAHVNVAISFVSPDERRHFNMIEKHIGKKLPLYPAPFEEVLL 277
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 75 EAFKGLALDDVNADGYDLAPPTTVSNDELDISKLGLPSELVRSLVNRGITSLFPIQRAVL 134
+ F G A+ + +G D T + D + S +GL L R+L N + + +Q + +
Sbjct: 66 QPFVGSAVSSEDFNGRD----TFFAEDNVSWSSIGLSHTLSRALSNIALNTPSLVQASSI 121
Query: 135 VPALEGKDIIARAKTGTGKTLAFGIPIIKG-----------VTDDSQSPQRRSGRLPKAL 183
L GKD++ A+TG+GKT ++ +P+I V+D SP R L
Sbjct: 122 PSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEYSLDVVSDKEISPPARK----VLL 177
Query: 184 VLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSRGVDVVVGTPGRIIDLVN 243
VL P +L +QV + + S + + A +Q R D++V TP +++ V+
Sbjct: 178 VLCPNVQLCEQVVR-MANSLCGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLNHVD 236
Query: 244 GNSLRLTE----VQYLVLDEADQMLAVGFEEDV 272
+ R E V+Y+V DEAD +L F+ V
Sbjct: 237 VDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKV 269
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 352 KTIVFTRTKKDADEVSLSLTNSIASEAL--HGDISQHQRERTLNGFRQGKFTVLVATDVA 409
+T+VF T +A E + + E L H + + +R +TL F K VLV TD A
Sbjct: 437 RTMVFANTV-EAVEAVVKILGYAGLECLRYHKNCTLDERAQTLVDF-YDKGGVLVCTDAA 494
Query: 410 SRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTV 461
+RG+DIPNV VI + F+HR GRT RAG+ G MYT + R V
Sbjct: 495 ARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELV 546
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 347 YAKGGKTIVFTRTKKDADEVSLSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVA 405
+A+ IV+ + + + D++S L N+I +++ H IS +R F K V+VA
Sbjct: 489 FAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVA 548
Query: 406 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLE 465
T GLD +V VIHY LP E +V GR GR G+ L Y +RSL
Sbjct: 549 TVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFYDDEMYFKLRSLM 608
Query: 466 HDVG 469
+ G
Sbjct: 609 YSEG 612
>Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
+SQ ++ +LN + G+ +L+ +D S+GLDIP VD+VI+Y +P P +++R G T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 443 AGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
AI + ++RR +E +G K P + +L
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVLL 136
>Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
+SQ ++ +LN + G+ +L+ +D S+GLDIP VD+VI+Y +P P +++R G T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 443 AGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
AI + ++RR +E +G K P + +L
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVLL 136
>Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
+SQ ++ +LN + G+ +L+ +D S+GLDIP VD+VI+Y +P P +++R G T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 443 AGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
AI + ++RR +E +G K P + +L
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVLL 136
>Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
+SQ ++ +LN + G+ +L+ +D S+GLDIP VD+VI+Y +P P +++R G T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 443 AGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEIL 484
AI + ++RR +E +G K P + +L
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVLL 136
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein |
HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 390 RTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTA 449
+TLN FR+G F VL+++D +R +D+ V VI+Y++P +T+VHR+GRT RA + G
Sbjct: 24 KTLNEFRKGVFQVLLSSDALTRVMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRC 83
Query: 450 ILMYTSNQRRTVRSLEHDVGCKFEFVS 476
+ + + E + C FE+ S
Sbjct: 84 FTLMSED--------EANDYCNFEWGS 102
>Medtr1g015150.1 | DEAD-box ATP-dependent RNA helicase, putative |
HC | chr1:3735983-3738997 | 20130731
Length = 132
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 16/87 (18%)
Query: 87 ADGYDLAPPTTVSNDE-LDISKLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIA 145
A+ + P+ ++DE L I+KLG+ ++V +L + IT LFPIQR
Sbjct: 37 AEAFPYEEPSKSNSDEGLQIAKLGISQDIVSALEKKAITKLFPIQRC------------- 83
Query: 146 RAKTGTGKTLAFGIPII-KGVTDDSQS 171
+TGTGKTLAFGIPII K + D+++
Sbjct: 84 -TRTGTGKTLAFGIPIIDKIIVSDNEA 109
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 351 GKTIVFTRTKKDADEVSLSLTNS-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVA 409
G TI++ T+KD ++ L S + + A + + + RT F + V+VAT
Sbjct: 507 GPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAF 566
Query: 410 SRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAIL 451
G+D NV +IHY P E + +GR GR GK IL
Sbjct: 567 GMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 608
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 354 IVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 412
I++ + D++S L+ I+ A H ++ R L+ + K V+VAT G
Sbjct: 266 IIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMG 325
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVG 469
+D +V +V H+ +P E F SGR GR T++L Y + RR + + + G
Sbjct: 326 IDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNSG 382
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 354 IVFTRTKKDADEVSLSLTN-SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 412
I++ + D++S L+ I+ A H ++ R L+ + K V+VAT G
Sbjct: 266 IIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMG 325
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSNQRRTVRSLEHDVG 469
+D +V +V H+ +P E F SGR GR T++L Y + RR + + + G
Sbjct: 326 IDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNSG 382
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 351 GKTIVFTRTKKDADEVSLSLTNS-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVA 409
G TI++ T+KD ++ L S + + A + + + RT F + V+VAT
Sbjct: 507 GPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAF 566
Query: 410 SRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAIL 451
G+D NV +IHY P E + +GR GR GK IL
Sbjct: 567 GMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 608
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 351 GKTIVFTRTKKDADEVSLSLTNS-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVA 409
G TI++ T+KD ++ L S + + A + + + RT F + V+VAT
Sbjct: 507 GPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAF 566
Query: 410 SRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAIL 451
G+D NV +IHY P E + +GR GR GK IL
Sbjct: 567 GMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 608
>Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr5:10949368-10935495 | 20130731
Length = 685
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 354 IVFTRTKKDADEVSLSL-TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 412
IV+ ++K+ ++V+ L I++ H D+ + RE+ + K V+V T G
Sbjct: 300 IVYCFSRKECEQVAKELRERGISAGHYHADMDVNDREKVHMRWSNNKLQVIVGTVAFGMG 359
Query: 413 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMY 453
++ P+V VIH+ L ET+ SGR GR G +L +
Sbjct: 360 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYF 400
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 267 GFEEDVETIL---QTVPTGRQTMLFSATMPGWVKKLSRKYLNKPLTIDLVGEDEEKLAHG 323
GF +D I+ Q + Q + FSAT+ VK + + K V ++E L
Sbjct: 3 GFRDDSLRIIEKTQKFNSNCQVLFFSATLNDIVKNFVTRIVAKEHNEIFVKKEELPL-KA 61
Query: 324 IKLYAVSATTNSKRTMLSDLVTVYAKG-GKTIVFTRTKKDADEVSLSLTNSIASEALHGD 382
+K Y V +L + K K +V K NSI H
Sbjct: 62 VKQYKVHCP--------DELAKIECKNVAKALVDLSYK----------VNSILDALEH-- 101
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELP--------------N 428
+R++ + F+ G VL++ DV +RG D V+LVI+Y+LP
Sbjct: 102 ---EERDKMVKEFKDGSTGVLISNDVLARGFDQDQVNLVINYDLPLNYTAEITCGGKPEL 158
Query: 429 DPETFVHRSGRTGRAGKEGTAI-LMYTSNQRRTVRSLEHDVG 469
D E + HR GR GR G++G L+ + + +E+ G
Sbjct: 159 DCEVYFHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFG 200
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 351 GKTIVFTRTKKDADEVSLSLTNS-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVA 409
G TI++ T+KD ++ L S + + A + + + RT F + V+VAT
Sbjct: 507 GPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAF 566
Query: 410 SRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 445
G+D NV +IHY P E + +GR GR GK
Sbjct: 567 GMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGK 602
>Medtr1g103260.1 | fanconi anemia, complementation group M protein |
HC | chr1:46727606-46713877 | 20130731
Length = 1198
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 317 EEKLAHGIKLYAVSATTNSKRTMLSDLVTVYAKGGKTIVFTRTKKDADEVSLSLTNS--- 373
++ L+HG +S +L T + + I+F+ ++ ++ ++L +
Sbjct: 426 QQSLSHGASSPKLSKML---EVLLEHFKTNDPQNSRVIIFSNYRESVRDIMVALGGTGDQ 482
Query: 374 ---------IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHY 424
+ +A+ G SQ ++ L FR G + V+VAT + GLDI VDLVI +
Sbjct: 483 VRATEFIGQSSGKAMKGQ-SQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISF 541
Query: 425 ELPNDPETFVHRSGRTGR 442
+ P + R GRTGR
Sbjct: 542 DANISPLRMIQRMGRTGR 559
>Medtr3g105390.1 | endoribonuclease dicer-like protein | HC |
chr3:48587251-48600607 | 20130731
Length = 1730
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 383 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGR 442
+++ +++ L+ FR GK +L TDV G+ +PN VI ++LP +++ GR+ R
Sbjct: 461 LARKRQKEILDSFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPTTVCSYIQSRGRSRR 520
Query: 443 AGKEGTAILMYTSNQRRTVRSLEHDVGCKFEFVSPPATQEILESSAEQVVAALSRVHPES 502
A + +L + ++R +I+ S AA+S+ H +
Sbjct: 521 ANSQFILMLERGNLKQRN------------------QLFDIIRSERSMNDAAVSKDHESN 562
Query: 503 VEFFTA--TAQKLVEERGTSVLAAALAQLSGFSRPPSSRSLINQ 544
+ FT T V+ G SV SS SLINQ
Sbjct: 563 LRAFTVRKTESYCVDSTGASVTL------------DSSVSLINQ 594
>Medtr6g040070.1 | DEAD/DEAH-box helicase | HC |
chr6:14397151-14388452 | 20130731
Length = 784
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Query: 107 KLGLPSELVRSLVNRGITSLFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPIIKGVT 166
+LG+ EL+ + G IQ V+ L+GK ++ + + +TLA+ +P+I+ +
Sbjct: 581 ELGMSDELIEVMEEIGEFVPSEIQCVVIPTILDGKSLLLSSPSQHDRTLAYLLPLIQMLR 640
Query: 167 DDSQSPQRRSGRLPKALVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVAYATQQNALSR 226
D + S + P+A+VL + E +VE+ + + V A+ S
Sbjct: 641 RDRELLGSNS-KYPRAVVLCASEE---KVEQCFNAARYIIHNAEVKSAKNRASSDTEKSN 696
Query: 227 G-VDVVVGTPGRIIDLVNGNSLRLTEVQYLVLDEADQML-AVGFEEDVETILQ 277
+ +++GTP I+ + ++ E++ LVLDEAD ML + F ++ I++
Sbjct: 697 SSIGLMIGTPYEILQYIEEGTIVPAELKCLVLDEADSMLGSSNFGPEINKIIR 749