Miyakogusa Predicted Gene

Lj5g3v1533500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1533500.1 Non Characterized Hit- tr|I1JR03|I1JR03_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,65.12,2e-18,seg,NULL,CUFF.55469.1
         (117 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g085240.2 | hypothetical protein | HC | chr1:38051471-3805...    88   2e-18
Medtr1g085240.1 | hypothetical protein | HC | chr1:38051471-3805...    88   2e-18
Medtr7g111180.1 | hypothetical protein | LC | chr7:45611462-4561...    67   3e-12
Medtr7g111170.1 | hypothetical protein | HC | chr7:45609062-4561...    65   2e-11

>Medtr1g085240.2 | hypothetical protein | HC |
          chr1:38051471-38050559 | 20130731
          Length = 114

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 6/82 (7%)

Query: 1  MASVTVNPSLFRSESLGHXXXXXXXXXXXXTMMEKRQLFLRSYQFCQKKSFTERIKGSLI 60
          M SVT+NP LFR+ES G+            TM+EKRQLFLRSYQFC+KKS TERIKGSL+
Sbjct: 1  MGSVTMNP-LFRTESFGYYNFPDQNY----TMIEKRQLFLRSYQFCRKKSLTERIKGSLV 55

Query: 61 RAKKVLWLRLWSSSAGGFRKLV 82
          RAKKV+WL+L   + G  RKLV
Sbjct: 56 RAKKVVWLKL-RYARGLRRKLV 76


>Medtr1g085240.1 | hypothetical protein | HC |
          chr1:38051471-38050559 | 20130731
          Length = 114

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 6/82 (7%)

Query: 1  MASVTVNPSLFRSESLGHXXXXXXXXXXXXTMMEKRQLFLRSYQFCQKKSFTERIKGSLI 60
          M SVT+NP LFR+ES G+            TM+EKRQLFLRSYQFC+KKS TERIKGSL+
Sbjct: 1  MGSVTMNP-LFRTESFGYYNFPDQNY----TMIEKRQLFLRSYQFCRKKSLTERIKGSLV 55

Query: 61 RAKKVLWLRLWSSSAGGFRKLV 82
          RAKKV+WL+L   + G  RKLV
Sbjct: 56 RAKKVVWLKL-RYARGLRRKLV 76


>Medtr7g111180.1 | hypothetical protein | LC |
          chr7:45611462-45611879 | 20130731
          Length = 114

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 10/80 (12%)

Query: 3  SVTVNPS-LFRSESLGHXXXXXXXXXXXXTMMEKRQLFLRSYQFCQKKSFTERIKGSLIR 61
          S+ +N S LFRS+S G+            T+MEKRQLFLRSYQF +KKSF+ERIKGS +R
Sbjct: 14 SINMNTSPLFRSDSFGYYSHEQHNY----TLMEKRQLFLRSYQFIRKKSFSERIKGSFVR 69

Query: 62 AKKVLWLRLWSSSAGGFRKL 81
           +KV+       SA  FR+L
Sbjct: 70 LRKVVI-----RSARKFRRL 84


>Medtr7g111170.1 | hypothetical protein | HC |
          chr7:45609062-45610069 | 20130731
          Length = 114

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 5/64 (7%)

Query: 3  SVTVNPSLFRSESLGHXXXXXXXXXXXXTMMEKRQLFLRSYQFCQKKSFTERIKGSLIRA 62
          ++  NP LFR +S G+            T+MEKRQLFLRSYQF +KKSF+ERIKGS +R 
Sbjct: 16 NMNTNP-LFRRDSFGYYSHEHHNY----TLMEKRQLFLRSYQFSRKKSFSERIKGSFVRL 70

Query: 63 KKVL 66
          +KV+
Sbjct: 71 RKVV 74