Miyakogusa Predicted Gene

Lj5g3v1530090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1530090.1 Non Characterized Hit- tr|I3T6A2|I3T6A2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.27,0,UNCHARACTERIZED,Protein of unknown function DUF846,
eukaryotic; DUF846,Protein of unknown function D,CUFF.55420.1
         (183 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g084620.1 | echidna-like protein | HC | chr1:37660827-3765...   347   4e-96

>Medtr1g084620.1 | echidna-like protein | HC |
           chr1:37660827-37657592 | 20130731
          Length = 183

 Score =  347 bits (890), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 167/183 (91%), Positives = 178/183 (97%)

Query: 1   MDPNQQVVENYANPRTCFFHVLFKAASLAFYILSTLFIANFVIIFVVTVLLAALDFWVVK 60
           MDPNQ +VENY+NPRTCFFHVLFKAA+LAFYILS LF+ NFVIIFVVTVLLAALDFWVVK
Sbjct: 1   MDPNQSIVENYSNPRTCFFHVLFKAAALAFYILSALFVDNFVIIFVVTVLLAALDFWVVK 60

Query: 61  NVSGRILVGLRWWNEINDLGESVWKFECLDQESLARMNKKDSWLFWWTLYLTAILWILLG 120
           NVSGRILVG+RWWNEI+DLGESVWKFECLDQ+SLARMNKKDSWLFWWTLYL A+LWI+L 
Sbjct: 61  NVSGRILVGMRWWNEIDDLGESVWKFECLDQDSLARMNKKDSWLFWWTLYLAAVLWIMLA 120

Query: 121 IFSLIRLQADYLLVVGVCLTLSIANIVGFTKCKKDAKKQLQQFASQTIATRFSSTLQSAF 180
           IFSLIRLQADYLLVVGVCLTLSIANIVGFTKCKKDAKKQ+QQFASQTIA+RFSSTLQSAF
Sbjct: 121 IFSLIRLQADYLLVVGVCLTLSIANIVGFTKCKKDAKKQIQQFASQTIASRFSSTLQSAF 180

Query: 181 SVV 183
           SVV
Sbjct: 181 SVV 183