Miyakogusa Predicted Gene

Lj5g3v1529890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1529890.1 CUFF.55613.1
         (178 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g084160.1 | transcription factor bHLH147 | HC | chr1:37567...   197   5e-51
Medtr4g122500.1 | transcription factor bHLH147 | HC | chr4:50504...   125   2e-29
Medtr2g033880.1 | transcription factor bHLH147 | HC | chr2:12914...    97   1e-20

>Medtr1g084160.1 | transcription factor bHLH147 | HC |
           chr1:37567595-37568579 | 20130731
          Length = 191

 Score =  197 bits (501), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/187 (60%), Positives = 125/187 (66%), Gaps = 16/187 (8%)

Query: 1   MDSLQPNT-ITDSETSPDSNHKKRRKI---THPQNPLNLMPWRSNADQQIYSLRLANALR 56
           MDS +PN+  T S TS +SNHKKRRKI   T  QN +NLMPWRS +DQ  YS +L  AL 
Sbjct: 1   MDSFEPNSDSTHSNTSQESNHKKRRKIDNLTTDQNSINLMPWRSQSDQNTYSKKLIQALL 60

Query: 57  RIPRP------AAQIRDTADRVLAATAKGRTRWSXXXXXXXXX---XXXXXXXXXXSGLR 107
           RI  P      A Q+R TADRVLAATAKGRTRWS                      +GL+
Sbjct: 61  RINSPETTKPAAGQVRQTADRVLAATAKGRTRWSRAILGKWKKLRRHHKKVKKASTNGLK 120

Query: 108 RAAIGRRKRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMAALAELL 167
           R  I   +RLPAVQKK RVLG+LVPGCRKV  PNLLEEATDYISALEMQVRAM ALAELL
Sbjct: 121 RERI---QRLPAVQKKTRVLGQLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALAELL 177

Query: 168 SGGAPAA 174
           +GG PA 
Sbjct: 178 AGGTPAG 184


>Medtr4g122500.1 | transcription factor bHLH147 | HC |
           chr4:50504673-50506015 | 20130731
          Length = 201

 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 102/190 (53%), Gaps = 19/190 (10%)

Query: 6   PNTITDSETSPDSNHKKRRKIT---HPQNPLNLMP-WRSNADQQIYSLRLANALRRI--- 58
           PN +T+++ S D+  KKR+  T   H Q+ + + P W+S   QQIYS +L  A+ R+   
Sbjct: 9   PNIVTNTDISRDTRRKKRKNKTQKHHQQDQIQINPKWKSQEQQQIYSTKLRQAITRVNSS 68

Query: 59  --PRPAAQIRDTADRVLAATAKGRTRWSXXXXXXXXXXXXXXXX--------XXXSGLRR 108
             PR    +R+ ADR LA TA+GRTRWS                           S   R
Sbjct: 69  STPRRGKAVREAADRALAVTARGRTRWSRTILMTRLKIKFRKKKPNRVTALPSTRSKKSR 128

Query: 109 AAIGRRKR--LPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMAALAEL 166
             + R K   +P++Q+K R LG LVPGC+K   P +LEEA DYI ALEMQVRAM+AL  L
Sbjct: 129 VNVFRLKGKVVPSMQRKVRFLGGLVPGCKKEPLPVILEEAIDYIPALEMQVRAMSALFNL 188

Query: 167 LSGGAPAAHV 176
           LS     A V
Sbjct: 189 LSASTSGAGV 198


>Medtr2g033880.1 | transcription factor bHLH147 | HC |
           chr2:12914710-12913368 | 20130731
          Length = 213

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 82/149 (55%), Gaps = 19/149 (12%)

Query: 38  WRSNADQQIYSLRLANALRRI--------PRPAAQIRDTADRVLAATAKGRTRWSXXXXX 89
           WRS A QQIYS +L  AL R+        PR    +R+ ADR LA  AKGRTRWS     
Sbjct: 45  WRSQAQQQIYSSKLHQALARVNIGGTTGGPRRGKAVREAADRALAVAAKGRTRWSRAILK 104

Query: 90  XXXXXXXXXXXXXXSGL-------RRAAIG----RRKRLPAVQKKARVLGRLVPGCRKVS 138
                                   ++A  G    + K LPAVQ+K ++LGRLVPGCRK  
Sbjct: 105 NKLRLKFRKQKRHQQNRAVGPARSKKARFGVLRLKGKTLPAVQRKVKILGRLVPGCRKEP 164

Query: 139 FPNLLEEATDYISALEMQVRAMAALAELL 167
            P +LEE  DYI ALEMQVRAM+ALA+LL
Sbjct: 165 LPVILEEVIDYIPALEMQVRAMSALADLL 193