Miyakogusa Predicted Gene
- Lj5g3v1511500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1511500.1 Non Characterized Hit- tr|I1NJ39|I1NJ39_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.24,0,PROKAR_LIPOPROTEIN,NULL; no description,WD40/YVTN
repeat-like-containing domain; SUBFAMILY NOT NAMED,TC63735.path2.1
(136 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g083700.1 | topless-like protein | HC | chr1:37248575-3725... 230 3e-61
Medtr7g112460.1 | topless-like protein | HC | chr7:46241649-4623... 217 3e-57
Medtr4g120900.1 | topless-like protein | HC | chr4:49954198-4996... 157 2e-39
Medtr2g104140.3 | topless-like protein | HC | chr2:44879015-4487... 138 1e-33
Medtr2g104140.4 | topless-like protein | HC | chr2:44879055-4487... 136 5e-33
Medtr2g104140.1 | topless-like protein | HC | chr2:44879026-4487... 136 5e-33
Medtr2g104140.2 | topless-like protein | HC | chr2:44878912-4487... 136 5e-33
Medtr2g104140.5 | topless-like protein | HC | chr2:44879046-4487... 136 5e-33
Medtr2g435440.1 | topless-like protein | LC | chr2:13690135-1368... 136 6e-33
Medtr4g009840.1 | topless-like protein | HC | chr4:2077221-20858... 135 2e-32
Medtr4g009840.2 | topless-like protein | HC | chr4:2077572-20858... 135 2e-32
Medtr4g114980.2 | topless-like protein | HC | chr4:47415501-4740... 131 1e-31
Medtr4g114980.1 | topless-like protein | HC | chr4:47415501-4740... 131 1e-31
Medtr2g435370.1 | transducin family protein/WD-40 repeat protein... 111 2e-25
Medtr1g012820.1 | topless-like protein | LC | chr1:2656746-26640... 88 2e-18
>Medtr1g083700.1 | topless-like protein | HC | chr1:37248575-37258577
| 20130731
Length = 1128
Score = 230 bits (586), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 106/136 (77%), Positives = 118/136 (86%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
MERIRQW+PQDALSAPIS A YSCNSQLIYA+FCDAN+GVFDAD+LRLRCRIAP +CLSS
Sbjct: 993 MERIRQWIPQDALSAPISYAAYSCNSQLIYASFCDANIGVFDADSLRLRCRIAPPICLSS 1052
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGILNGRX 120
AALS +QAVYP V+A HPLEPNQFAVGL+DGSVKVIEP+ESEGKWGSSPP+DNGI+NG+
Sbjct: 1053 AALSRSQAVYPLVIAAHPLEPNQFAVGLSDGSVKVIEPSESEGKWGSSPPMDNGIMNGKA 1112
Query: 121 XXXXXXXXXXXDQAQR 136
DQAQR
Sbjct: 1113 PSPSTTSNHTADQAQR 1128
>Medtr7g112460.1 | topless-like protein | HC | chr7:46241649-46233077
| 20130731
Length = 1129
Score = 217 bits (552), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 98/119 (82%), Positives = 107/119 (89%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
MERIRQWVPQD LSAPIS A YSCNSQLI+ATFCD N GVFDAD+LRLRCRIAPS ++
Sbjct: 995 MERIRQWVPQDVLSAPISYAAYSCNSQLIFATFCDGNTGVFDADSLRLRCRIAPSTYFTA 1054
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGILNGR 119
LSG+QAVYPFVVA HPLEPNQFA+GLTDGSVKVIEP ESEGKWGSSPP+DNG++NGR
Sbjct: 1055 TTLSGSQAVYPFVVAAHPLEPNQFALGLTDGSVKVIEPIESEGKWGSSPPMDNGMMNGR 1113
>Medtr4g120900.1 | topless-like protein | HC | chr4:49954198-49962193
| 20130731
Length = 1122
Score = 157 bits (398), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
ME IRQWVPQD S IS A YSCNSQL+YA F D ++GVFD+D+LRLRCRIA S L
Sbjct: 993 MELIRQWVPQDGSSTSISSATYSCNSQLVYAAFTDGSIGVFDSDSLRLRCRIASSAYLHQ 1052
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDN 113
++ S +Q +YPFVVA HP EPNQFAVG++DGS+KVIEP E G+WG S VDN
Sbjct: 1053 SS-SISQNIYPFVVAAHPQEPNQFAVGMSDGSIKVIEPIEPNGRWGVSASVDN 1104
>Medtr2g104140.3 | topless-like protein | HC | chr2:44879015-44871394
| 20130731
Length = 1149
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 83/114 (72%), Gaps = 3/114 (2%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QW P+DA +APIS A +SC+S LI+A+F DA + VF A LRLRCRI PS LS+
Sbjct: 1020 LECLKQWFPRDA-AAPISHATFSCDSNLIFASFLDATICVFSASNLRLRCRINPSAYLSA 1078
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
S N + P V+A HP EPNQFAVGL+DG V V EP ESEGKWG PP++NG
Sbjct: 1079 NVSSSN--IQPLVIAAHPHEPNQFAVGLSDGIVHVFEPLESEGKWGVPPPIENG 1130
>Medtr2g104140.4 | topless-like protein | HC | chr2:44879055-44871294
| 20130731
Length = 1133
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 84/114 (73%), Gaps = 4/114 (3%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QW P+DA +APIS A +SC+S LI+A+F DA + VF A LRLRCRI PS LS
Sbjct: 1005 LECLKQWFPRDA-AAPISHATFSCDSNLIFASFLDATICVFSASNLRLRCRINPSAYLS- 1062
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
A +S N + P V+A HP EPNQFAVGL+DG V V EP ESEGKWG PP++NG
Sbjct: 1063 ANVSSN--IQPLVIAAHPHEPNQFAVGLSDGIVHVFEPLESEGKWGVPPPIENG 1114
>Medtr2g104140.1 | topless-like protein | HC | chr2:44879026-44871294
| 20130731
Length = 1148
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 84/114 (73%), Gaps = 4/114 (3%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QW P+DA +APIS A +SC+S LI+A+F DA + VF A LRLRCRI PS LS
Sbjct: 1020 LECLKQWFPRDA-AAPISHATFSCDSNLIFASFLDATICVFSASNLRLRCRINPSAYLS- 1077
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
A +S N + P V+A HP EPNQFAVGL+DG V V EP ESEGKWG PP++NG
Sbjct: 1078 ANVSSN--IQPLVIAAHPHEPNQFAVGLSDGIVHVFEPLESEGKWGVPPPIENG 1129
>Medtr2g104140.2 | topless-like protein | HC | chr2:44878912-44871394
| 20130731
Length = 1126
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 84/114 (73%), Gaps = 4/114 (3%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QW P+DA +APIS A +SC+S LI+A+F DA + VF A LRLRCRI PS LS
Sbjct: 998 LECLKQWFPRDA-AAPISHATFSCDSNLIFASFLDATICVFSASNLRLRCRINPSAYLS- 1055
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
A +S N + P V+A HP EPNQFAVGL+DG V V EP ESEGKWG PP++NG
Sbjct: 1056 ANVSSN--IQPLVIAAHPHEPNQFAVGLSDGIVHVFEPLESEGKWGVPPPIENG 1107
>Medtr2g104140.5 | topless-like protein | HC | chr2:44879046-44871294
| 20130731
Length = 1111
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 84/114 (73%), Gaps = 4/114 (3%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QW P+DA +APIS A +SC+S LI+A+F DA + VF A LRLRCRI PS LS
Sbjct: 983 LECLKQWFPRDA-AAPISHATFSCDSNLIFASFLDATICVFSASNLRLRCRINPSAYLS- 1040
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNG 114
A +S N + P V+A HP EPNQFAVGL+DG V V EP ESEGKWG PP++NG
Sbjct: 1041 ANVSSN--IQPLVIAAHPHEPNQFAVGLSDGIVHVFEPLESEGKWGVPPPIENG 1092
>Medtr2g435440.1 | topless-like protein | LC |
chr2:13690135-13683157 | 20130731
Length = 972
Score = 136 bits (342), Expect = 6e-33, Method: Composition-based stats.
Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
ME I QW+P++ LS IS YSCN Q++YA F + N+GVFDA L+LRC IA S L+
Sbjct: 862 MELILQWLPRNGLSDAISSVAYSCNGQIVYAAFTNGNIGVFDAVRLQLRCHIASSAYLNQ 921
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPV 111
S +Q VYP HP EPNQFA+ L+DG+VKV+EPTES G WG+ PPV
Sbjct: 922 TP-SNSQNVYPLGFTAHPKEPNQFAIALSDGTVKVLEPTESAGSWGNMPPV 971
>Medtr4g009840.1 | topless-like protein | HC | chr4:2077221-2085811 |
20130731
Length = 1137
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 87/136 (63%), Gaps = 4/136 (2%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QW P+D+ SAPIS A +SC+SQLIYA+F DA V VF+A LRLRCRI P L +
Sbjct: 1006 LECLKQWAPRDS-SAPISHATFSCDSQLIYASFLDATVCVFNASNLRLRCRINPPAYLPA 1064
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGILNGRX 120
+ N V P V+A HP E NQFAVGL+DG V V EP ESEGKWG PP +NG +
Sbjct: 1065 SV--SNSNVQPLVIAAHPHEANQFAVGLSDGGVHVFEPLESEGKWGVPPPNENGS-SSNN 1121
Query: 121 XXXXXXXXXXXDQAQR 136
DQAQR
Sbjct: 1122 VAVATSVGLSSDQAQR 1137
>Medtr4g009840.2 | topless-like protein | HC | chr4:2077572-2085811 |
20130731
Length = 1137
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 87/136 (63%), Gaps = 4/136 (2%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QW P+D+ SAPIS A +SC+SQLIYA+F DA V VF+A LRLRCRI P L +
Sbjct: 1006 LECLKQWAPRDS-SAPISHATFSCDSQLIYASFLDATVCVFNASNLRLRCRINPPAYLPA 1064
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGILNGRX 120
+ N V P V+A HP E NQFAVGL+DG V V EP ESEGKWG PP +NG +
Sbjct: 1065 SV--SNSNVQPLVIAAHPHEANQFAVGLSDGGVHVFEPLESEGKWGVPPPNENGS-SSNN 1121
Query: 121 XXXXXXXXXXXDQAQR 136
DQAQR
Sbjct: 1122 VAVATSVGLSSDQAQR 1137
>Medtr4g114980.2 | topless-like protein | HC | chr4:47415501-47405976
| 20130731
Length = 1114
Score = 131 bits (330), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 4/115 (3%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QWVP++A S PI+ A YSC+SQ IY +F D ++GV A TLRLRCRI + L+
Sbjct: 988 LECLKQWVPREA-SGPITHATYSCDSQSIYVSFEDGSIGVLTASTLRLRCRINQTAYLNP 1046
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGI 115
+ + VYP V+A HP E NQFA+GLTDG V V+EP ESEG+WGS PP +NG+
Sbjct: 1047 ---NPSLRVYPLVIAAHPSESNQFALGLTDGGVHVLEPLESEGRWGSPPPTENGV 1098
>Medtr4g114980.1 | topless-like protein | HC | chr4:47415501-47405976
| 20130731
Length = 1134
Score = 131 bits (330), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 4/115 (3%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
+E ++QWVP++A S PI+ A YSC+SQ IY +F D ++GV A TLRLRCRI + L+
Sbjct: 1008 LECLKQWVPREA-SGPITHATYSCDSQSIYVSFEDGSIGVLTASTLRLRCRINQTAYLNP 1066
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKWGSSPPVDNGI 115
+ + VYP V+A HP E NQFA+GLTDG V V+EP ESEG+WGS PP +NG+
Sbjct: 1067 ---NPSLRVYPLVIAAHPSESNQFALGLTDGGVHVLEPLESEGRWGSPPPTENGV 1118
>Medtr2g435370.1 | transducin family protein/WD-40 repeat protein | LC
| chr2:13635255-13627673 | 20130731
Length = 1050
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 1 MERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSS 60
ME IR W+PQ LS IS A Y C+ ++IYA F D N+G+F AD L LRCRI+ S L
Sbjct: 946 MELIRWWLPQGGLSGAISSATYCCHGEVIYAAFTDGNIGIFSADNLILRCRISSSSYLFQ 1005
Query: 61 AALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKW 105
S +Q VYP + HP + QFA+GL+DGSV ++EP + E W
Sbjct: 1006 TP-SNSQNVYPLFITRHPQDRYQFAIGLSDGSVTIMEPKKYEAWW 1049
>Medtr1g012820.1 | topless-like protein | LC | chr1:2656746-2664018
| 20130731
Length = 625
Score = 88.2 bits (217), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 4 IRQWVPQDALSAPISC-AVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPSVCLSSAA 62
+ QW D+ + C A +S N Q++YA F D N+ +FDA ++ I PSV S+
Sbjct: 511 VNQW---DSNFPTVICQATFSSNGQMVYACFLDGNLAIFDASNFQMHYNIQPSVYHLSSI 567
Query: 63 LSGNQAVYPFVVATHPLEPNQFAVGLTDGSVKVIEPTESEGKW 105
S +YP V+A HP +PNQFAVGLTDG V V EP E G W
Sbjct: 568 PS--VKIYPTVLAAHPQKPNQFAVGLTDGCVYVFEPKEPCGNW 608