Miyakogusa Predicted Gene

Lj5g3v1499410.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1499410.2 Non Characterized Hit- tr|F2AP00|F2AP00_RHOBT
Putative uncharacterized protein OS=Rhodopirellula
bal,32.57,4e-19,TPR-like,NULL; TPR_2,Tetratricopeptide TPR2;
TPR_REGION,Tetratricopeptide repeat-containing domain; ,CUFF.55359.2
         (177 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g083600.1 | TPR repeat protein | HC | chr1:37194952-371978...   344   3e-95
Medtr1g083600.2 | TPR repeat protein | HC | chr1:37194952-371972...   267   3e-72

>Medtr1g083600.1 | TPR repeat protein | HC | chr1:37194952-37197889
           | 20130731
          Length = 265

 Score =  344 bits (882), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 162/177 (91%), Positives = 169/177 (95%)

Query: 1   MSLFRQGDVSGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLNRFEEGAEQFRLDVAQNPND 60
           MSLFRQG+V GSVVEFDKAIQLDPRQKAYLWQRGLSLYYL+RFEEGAEQFRLDVAQNPND
Sbjct: 87  MSLFRQGEVLGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPND 146

Query: 61  TEESIWCFLCEAQLYGVDEARKRYLEVGRDSRPVMREAYNMFRDGGDPEKLVAAFSNGRE 120
           TEESIWCFLCEAQLYGVDEARKRYLEVGRD RPVMRE YNMF+DGGDPEKLV AFSN RE
Sbjct: 147 TEESIWCFLCEAQLYGVDEARKRYLEVGRDPRPVMRETYNMFKDGGDPEKLVGAFSNSRE 206

Query: 121 GEYFYASLYAGLYYESQNETDAAKVHMVAACQSSYGQRSDDYMASLSKVHCLCRNWT 177
            +YFYASLYAGLYYESQNE+DAAKVH+VAAC+S YGQRSDDYMASLSKVHCLCRNW 
Sbjct: 207 SDYFYASLYAGLYYESQNESDAAKVHIVAACKSLYGQRSDDYMASLSKVHCLCRNWN 263


>Medtr1g083600.2 | TPR repeat protein | HC | chr1:37194952-37197248
           | 20130731
          Length = 225

 Score =  267 bits (683), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 127/137 (92%), Positives = 131/137 (95%)

Query: 1   MSLFRQGDVSGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLNRFEEGAEQFRLDVAQNPND 60
           MSLFRQG+V GSVVEFDKAIQLDPRQKAYLWQRGLSLYYL+RFEEGAEQFRLDVAQNPND
Sbjct: 87  MSLFRQGEVLGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPND 146

Query: 61  TEESIWCFLCEAQLYGVDEARKRYLEVGRDSRPVMREAYNMFRDGGDPEKLVAAFSNGRE 120
           TEESIWCFLCEAQLYGVDEARKRYLEVGRD RPVMRE YNMF+DGGDPEKLV AFSN RE
Sbjct: 147 TEESIWCFLCEAQLYGVDEARKRYLEVGRDPRPVMRETYNMFKDGGDPEKLVGAFSNSRE 206

Query: 121 GEYFYASLYAGLYYESQ 137
            +YFYASLYAGLYYESQ
Sbjct: 207 SDYFYASLYAGLYYESQ 223