Miyakogusa Predicted Gene

Lj5g3v1495700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1495700.1 tr|B9IMB0|B9IMB0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_578714 PE=4
SV=1,71.81,0,ADXRDTASE,NULL; SUBFAMILY NOT NAMED,NULL; ELECTRON
TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE,N,CUFF.55312.1
         (435 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g467050.1 | FAD/NAD(P)-binding oxidoreductase-like protein...   654   0.0  

>Medtr8g467050.1 | FAD/NAD(P)-binding oxidoreductase-like protein |
           HC | chr8:23996036-24014646 | 20130731
          Length = 702

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/440 (75%), Positives = 366/440 (83%), Gaps = 15/440 (3%)

Query: 1   MLLLP-CS-KLHTSLCFHTPIHGGTAAPFTGHHPLRNNKI---CCAKRTGKQRYPSEXXX 55
           +LLLP CS +L+T+  F TP        +  +   RN+ I   C  KRTGKQRYPSE   
Sbjct: 2   VLLLPSCSNQLNTTFWFSTP-------SYRRNQSHRNSNIIIKCANKRTGKQRYPSEKRK 54

Query: 56  XXXXXXQALQPSSDDNSKFEGTWRLSNLAVPLTQDPGKDSLEVSDGLLQEIAKVIEFPVA 115
                 + L  + + ++KFEGTWRL NLAVPL QDPGKD LEVSD LL  IAK+++FPVA
Sbjct: 55  LKSKHKELLSSNDNKSNKFEGTWRLCNLAVPLDQDPGKDFLEVSDALLHVIAKLLKFPVA 114

Query: 116 SLLPREAFSVVRKSFDARKKLKEPKFVHTVDMDVQKLLDLEPRSWDFISRLEPKVGLVEH 175
           S+LPRE FSVVRKSFDARK   EPKFVHTVDMDVQKLL LEPRSWDFIS+L+PKVGLVE 
Sbjct: 115 SMLPREPFSVVRKSFDARK---EPKFVHTVDMDVQKLLSLEPRSWDFISQLQPKVGLVER 171

Query: 176 VLERKDIGDLMSIIHDCKENKEDVVNGENGHSIFSRELNGNRAARKPKIAVVGSGPSGLF 235
           V +  D GDLMSII DCKENKED+V GENGHSIFS+EL   +  RKPKIA+VGSGPSGLF
Sbjct: 172 VNDEGDFGDLMSIIRDCKENKEDLVKGENGHSIFSKELYKKQDTRKPKIAIVGSGPSGLF 231

Query: 236 AALVLAELGADVTVIERGQPVEKRGRDIGALVVRRILELESNFCFGEGGAGTWSDGKLVT 295
           AALVLAELGADVT+IERGQPVEKRGRDIGAL+VRRILELESNFCFGEGGAGTWSDGKLVT
Sbjct: 232 AALVLAELGADVTLIERGQPVEKRGRDIGALIVRRILELESNFCFGEGGAGTWSDGKLVT 291

Query: 296 RIGRNSGSVLAVMRTLVQFGAPKQILIDGKPHLGTDRLVPLLRNFRRHLQDLDVAIKFGT 355
           RIGRNSGSV+AVMRTLVQFGA KQILIDGKPHLGTDRLVPLLRNFR+HLQDL V IKFGT
Sbjct: 292 RIGRNSGSVIAVMRTLVQFGATKQILIDGKPHLGTDRLVPLLRNFRQHLQDLGVTIKFGT 351

Query: 356 RVDDLVINDGHVLGVMASESTDQSRLRSQKMEFDAVILAVGHSARDMYQTLLTHNVELVP 415
           RVDDL I DG VLGVM SES D+ RLRSQ++E DAVILAVGHSARD+YQ LLTHNVELVP
Sbjct: 352 RVDDLQIEDGQVLGVMVSESADELRLRSQRLECDAVILAVGHSARDVYQMLLTHNVELVP 411

Query: 416 KDFAVGFRIEHPQELINSMQ 435
           KDFAVG RIEHPQELIN +Q
Sbjct: 412 KDFAVGLRIEHPQELINRIQ 431