Miyakogusa Predicted Gene

Lj5g3v1494590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1494590.1 Non Characterized Hit- tr|D8SH96|D8SH96_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,30.71,4e-17,coiled-coil,NULL; seg,NULL;
Q8LI99_ORYSA_Q8LI99;,NULL,CUFF.55300.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g082770.1 | glycoprotein membrane precursor GPI-anchored p...   222   2e-58
Medtr1g082830.1 | glycoprotein membrane precursor GPI-anchored p...   173   1e-43
Medtr7g113640.1 | glycoprotein membrane precursor GPI-anchored p...   145   3e-35
Medtr1g082790.1 | glycoprotein membrane precursor GPI-anchored p...   127   7e-30
Medtr1g105305.1 | glycoprotein membrane precursor GPI-anchored p...   114   4e-26
Medtr5g005710.1 | glycoprotein membrane precursor GPI-anchored p...   112   3e-25

>Medtr1g082770.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr1:36835511-36836249 | 20130731
          Length = 201

 Score =  222 bits (565), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/182 (68%), Positives = 139/182 (76%), Gaps = 5/182 (2%)

Query: 1   MASFK--LGLYLLVAVFSLHLLPSPVMC--GEEEKTLLHDINTYRKIFNLPVLEKRSKLS 56
           M+SFK  LGLYLL+ VFS  LL SPV C  GE+EK LLHDINTYRK+ NLP+LEK  K S
Sbjct: 1   MSSFKHGLGLYLLLLVFSHILLTSPVTCACGEKEKDLLHDINTYRKVLNLPILEKTDKPS 60

Query: 57  CLAEKIAXXXXXXXXXKCENFYP-APGSYSKLPNFEKSVSKCKINLNTTSGGVVMPVCVP 115
           CLA KIA         +  N+YP  PG   K+PNFEKSV KCKIN+NTT  GV+MP+CVP
Sbjct: 61  CLANKIANDLEHKHCEEFHNYYPNIPGKNPKIPNFEKSVEKCKININTTKDGVIMPMCVP 120

Query: 116 KLDPDYLFSNYTKSSRFNKYLNNSRYTIAGVGSEDNWMVLIISTDTASGDFSSATSLLSE 175
           KLD D LFSNYTK+S F KYLNNS+Y IAGVGSED+WMVLIIST+T SGDFSSA SLL  
Sbjct: 121 KLDQDDLFSNYTKNSHFTKYLNNSKYIIAGVGSEDDWMVLIISTNTTSGDFSSANSLLVG 180

Query: 176 AW 177
           AW
Sbjct: 181 AW 182


>Medtr1g082830.1 | glycoprotein membrane precursor GPI-anchored
           protein | LC | chr1:36846949-36847715 | 20130731
          Length = 218

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 88/150 (58%), Positives = 108/150 (72%), Gaps = 1/150 (0%)

Query: 28  EEEKTLLHDINTYRKIFNLPVLEKRSKLSCLAEKIAXXXXXXXXXKCENFYPAPGSYSKL 87
           + +  LLHDINTYRK  NLP+LEK  K SCLA +IA            +F+P PG   ++
Sbjct: 47  DPDDDLLHDINTYRKALNLPILEKNYKASCLANRIAYDLEDKHCEYFHDFHPLPGINPEI 106

Query: 88  PNFEKSVSKCKINLNTTSGGVVMPVCVPK-LDPDYLFSNYTKSSRFNKYLNNSRYTIAGV 146
           PNF++SV KC IN+NTT  GVVMPVCVP+ +  + LFSNYTK+SRF  YLNNS+YT+AGV
Sbjct: 107 PNFQRSVKKCDININTTRDGVVMPVCVPEIMHENDLFSNYTKNSRFTPYLNNSKYTLAGV 166

Query: 147 GSEDNWMVLIISTDTASGDFSSATSLLSEA 176
           G + + MVLII T+TASGDFSSAT LL  A
Sbjct: 167 GHDLDKMVLIIGTNTASGDFSSATYLLHGA 196


>Medtr7g113640.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr7:46835440-46833848 | 20130731
          Length = 195

 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 115/175 (65%), Gaps = 2/175 (1%)

Query: 1   MASFKLGLYLLVAVFSLHLLPSPVMCGEEEKTLLHDINTYRKIFNLPVLEKRSKLSCLAE 60
           MA FKL L LL ++F+   L +P    ++E ++L  IN++R+  NL  L K  K  CLA+
Sbjct: 1   MACFKLNLLLLASLFTFLFLSNPAHSSDKEDSVLKGINSFRQTKNLAPLNKNDKAHCLAD 60

Query: 61  KIAXXXXXXXXXKCENFYP--APGSYSKLPNFEKSVSKCKINLNTTSGGVVMPVCVPKLD 118
           ++A         K   +YP   PG   ++PN +K + KC IN+NTT+ GV++PVCV KL+
Sbjct: 61  EVAEEIEDTPCEKVNQYYPVSGPGGNQRIPNLQKHIDKCDININTTTDGVILPVCVSKLE 120

Query: 119 PDYLFSNYTKSSRFNKYLNNSRYTIAGVGSEDNWMVLIISTDTASGDFSSATSLL 173
           P  + SNYT S  + K+LNNS+YT  G+GSED+WMVL+++T+T +G FS+AT+ L
Sbjct: 121 PTVVLSNYTHSDIYAKFLNNSKYTGVGLGSEDDWMVLVLTTNTTTGTFSAATTSL 175


>Medtr1g082790.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr1:36838954-36840861 | 20130731
          Length = 168

 Score =  127 bits (319), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/162 (48%), Positives = 95/162 (58%), Gaps = 18/162 (11%)

Query: 1   MASFK--LGLYLLVAVFSLHLLPSPV----------------MCGEEEKTLLHDINTYRK 42
           M+SFK  LGLYLL+ VFS  LL SPV                  G++E  LLHDIN YRK
Sbjct: 1   MSSFKHGLGLYLLLLVFSHSLLTSPVAYAWFGRRGFWWIPWWRWGDKENDLLHDINIYRK 60

Query: 43  IFNLPVLEKRSKLSCLAEKIAXXXXXXXXXKCENFYPAPGSYSKLPNFEKSVSKCKINLN 102
           + NLP+LE+    SCLA K A            +F+P P     +PNF+KSV KC I +N
Sbjct: 61  VQNLPILEENYDASCLAIKFAYDLKDKHCEDFHDFHPLPSRNPSIPNFQKSVWKCNITIN 120

Query: 103 TTSGGVVMPVCVPKLDPDYLFSNYTKSSRFNKYLNNSRYTIA 144
           TT   V+M VCVP LD D LFSNYT+ S F +YLNNS+YT  
Sbjct: 121 TTKDWVLMRVCVPGLDEDDLFSNYTRDSHFTEYLNNSKYTTG 162


>Medtr1g105305.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr1:47417106-47416033 | 20130731
          Length = 199

 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 102/179 (56%), Gaps = 6/179 (3%)

Query: 8   LYLLVAVFSLHLLPSPVMCGEEEK-TLLHDINTYRKIFNLPVLEKRSKLSCLAEKIAXXX 66
            ++L + + + L+  PV C ++EK  L   IN YR   NL  L K     CLA+KIA   
Sbjct: 10  FWILFSSYVIFLMNYPVKCDDDEKDNLYQGINKYRASLNLKSLTKNKNADCLADKIADQF 69

Query: 67  XXXXXXKCENFYPAPGSYSKLPNFEKSVSKCKINLNTTSGGVVMPVCVPKLDPDYLFSNY 126
                         PG+  +  N+   ++KC++ ++ T  G VMP CVP L    + +N+
Sbjct: 70  KNQPCTNTTGANTVPGTEPQFSNYPNLLAKCQLAISDTRDGAVMPACVPGLASGLVLANF 129

Query: 127 TKSSRFNKYLNNSRYTIAGVGSEDNWMVLIISTDTASGDF----SSATSLLSEAWTSHC 181
           TKS  +++ LN+++YT  G+GSEDNW+V++++TDT +G+F    S++ +L+S+    +C
Sbjct: 130 TKS-LYSQNLNDTQYTGIGIGSEDNWIVVVLTTDTPTGNFAPYSSNSANLISKVGMIYC 187


>Medtr5g005710.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr5:583141-585062 | 20130731
          Length = 201

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 87/152 (57%), Gaps = 2/152 (1%)

Query: 16  SLHLLPSPVMCG-EEEKTLLHDINTYRKIFNLPVLEKRSKLSCLAEKIAXXXXXXXXXKC 74
           S+ L    V C  +EE  L   +N YR   NL  L K    +C AEK+A           
Sbjct: 14  SILLFSHSVHCDHDEEDDLYQGVNMYRTSLNLTSLTKNENANCFAEKLADQFKNKPCTNT 73

Query: 75  ENFYPAPGSYSKLPNFEKSVSKCKINLNTTSGGVVMPVCVPKLDPDYLFSNYTKSSRFNK 134
                 PG+  + PN+E  ++KC +N++ T  G VMP CVP L P  + SN+T+ S +++
Sbjct: 74  TGANTIPGTEPQFPNYEDLLTKCHLNISNTRDGSVMPACVPGLVPSIVLSNFTQ-SLYSQ 132

Query: 135 YLNNSRYTIAGVGSEDNWMVLIISTDTASGDF 166
            LN+S++T  G+GSEDNW+V++++T+T+ G F
Sbjct: 133 NLNDSKFTGIGIGSEDNWIVVVLTTNTSDGSF 164