Miyakogusa Predicted Gene

Lj5g3v1453360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1453360.1 Non Characterized Hit- tr|I1JRE7|I1JRE7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37130
PE,67.65,0.000000000000002,seg,NULL,CUFF.55285.1
         (99 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g082650.1 | heavy-metal-associated domain protein | HC | c...    52   1e-07

>Medtr1g082650.1 | heavy-metal-associated domain protein | HC |
           chr1:36784577-36787395 | 20130731
          Length = 577

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 57  HMMYG--RPHPSMNYXXXXXXXXXXXXXXXTHVFSDENTESCSIM 99
           HMMYG  RPHPSMNY               THVFSDENTESCSIM
Sbjct: 533 HMMYGGGRPHPSMNYMGPPPMPSHPMADPITHVFSDENTESCSIM 577