Miyakogusa Predicted Gene

Lj5g3v1427790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1427790.1 Non Characterized Hit- tr|C6T767|C6T767_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13231 PE,56.04,3e-18,no
description,PapD-like; coiled-coil,NULL; PapD-like,PapD-like;
seg,NULL; VESICLE-ASSOCIATED MEMBRA,CUFF.55246.1
         (366 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g081950.2 | VAMP-associated protein | HC | chr1:36514800-3...   461   e-130
Medtr1g081950.1 | VAMP-associated protein | HC | chr1:36513588-3...   461   e-130
Medtr4g118760.1 | VAMP-associated protein | HC | chr4:49201562-4...    92   9e-19
Medtr4g118760.2 | VAMP-associated protein | HC | chr4:49201562-4...    92   1e-18
Medtr4g026830.1 | VAMP-associated protein | LC | chr4:9255936-92...    63   5e-10
Medtr4g027050.1 | VAMP-associated protein | HC | chr4:9310428-93...    62   7e-10
Medtr5g013320.1 | VAMP-associated protein | HC | chr5:4204900-42...    62   8e-10
Medtr5g012420.2 | VAMP-associated protein | HC | chr5:3721059-37...    61   2e-09
Medtr5g012420.1 | VAMP-associated protein | HC | chr5:3721097-37...    60   3e-09
Medtr4g026620.1 | vesicle-associated protein | HC | chr4:9154057...    60   4e-09
Medtr4g101020.1 | VAMP-associated protein | HC | chr4:41712222-4...    54   2e-07
Medtr4g026650.1 | MSP (major sperm protein) domain protein | HC ...    53   5e-07

>Medtr1g081950.2 | VAMP-associated protein | HC |
           chr1:36514800-36518529 | 20130731
          Length = 365

 Score =  461 bits (1187), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/376 (67%), Positives = 286/376 (76%), Gaps = 21/376 (5%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPPD 60
           MQAQRVAPED+VCKDKFL+QST V AE T+EDVTS+LFVKD  RYIEENKLKVALISPPD
Sbjct: 1   MQAQRVAPEDLVCKDKFLVQSTLVDAEITTEDVTSSLFVKDGLRYIEENKLKVALISPPD 60

Query: 61  SPDFSHTSGESKNGLDHEKVQIYSKDEI--QSPEAMVKGNFVDAWDLKKVENNIVH---- 114
           SP+    +G+SKNG  HEKVQI+ KDEI  QSPE MV         LKK E+N VH    
Sbjct: 61  SPELVPVNGDSKNGFHHEKVQIHGKDEIEIQSPEPMV---------LKKPEHNKVHIPEH 111

Query: 115 ----EVKLEDDMELKPEHDTVLETINDVGMPEEETGLKVSKDEELNTVKDVXXXXXXXXX 170
                V++E+DMELK E+   L+ I DVG P EE GLKVS+ EE+N+VK V         
Sbjct: 112 TKVCNVEIEEDMELKVEYGMGLDAIKDVGEPREEAGLKVSRVEEMNSVKGVEELKPQKKI 171

Query: 171 XXXVSKDLDSITVKNAEELKPGKEAEFKVSRDPDLNKINREEELKPGKDVELKVSKDLDL 230
              VSKDLDSITVKNAEELKPGKEAE KVS+D     + + EELKPGK+ +L V KD  L
Sbjct: 172 EVQVSKDLDSITVKNAEELKPGKEAEMKVSKDLGSITVKKAEELKPGKEADLNVLKD-HL 230

Query: 231 NTINSAAELKPEEESELNVSKDLEEFNTVKNVQELKPEKEAGLRVSKGIEELKLMEAIEE 290
            T+N+   L PE+E E  VS D     TVKNV+ELKPEKEA  RVSKGIEELKL+EAIEE
Sbjct: 231 TTVNNGKALTPEKEIESKVSTDTV-IKTVKNVEELKPEKEAESRVSKGIEELKLLEAIEE 289

Query: 291 MKLKLDGLEAKLNESGITISKLTEERRLNNQEAKILQQKLDDLINKGPRKVQVGFPFLYV 350
           MKLKLDGLE+KLNESG+TISKLTEERRL+NQEAKILQ+KL DLIN GPRKVQVGFP LYV
Sbjct: 290 MKLKLDGLESKLNESGVTISKLTEERRLSNQEAKILQEKLADLINTGPRKVQVGFPLLYV 349

Query: 351 CMVALICVFLGYRLHS 366
           CMVALICVFLGYRLHS
Sbjct: 350 CMVALICVFLGYRLHS 365


>Medtr1g081950.1 | VAMP-associated protein | HC |
           chr1:36513588-36518631 | 20130731
          Length = 435

 Score =  461 bits (1186), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/376 (67%), Positives = 286/376 (76%), Gaps = 21/376 (5%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPPD 60
           MQAQRVAPED+VCKDKFL+QST V AE T+EDVTS+LFVKD  RYIEENKLKVALISPPD
Sbjct: 71  MQAQRVAPEDLVCKDKFLVQSTLVDAEITTEDVTSSLFVKDGLRYIEENKLKVALISPPD 130

Query: 61  SPDFSHTSGESKNGLDHEKVQIYSKDEI--QSPEAMVKGNFVDAWDLKKVENNIVH---- 114
           SP+    +G+SKNG  HEKVQI+ KDEI  QSPE MV         LKK E+N VH    
Sbjct: 131 SPELVPVNGDSKNGFHHEKVQIHGKDEIEIQSPEPMV---------LKKPEHNKVHIPEH 181

Query: 115 ----EVKLEDDMELKPEHDTVLETINDVGMPEEETGLKVSKDEELNTVKDVXXXXXXXXX 170
                V++E+DMELK E+   L+ I DVG P EE GLKVS+ EE+N+VK V         
Sbjct: 182 TKVCNVEIEEDMELKVEYGMGLDAIKDVGEPREEAGLKVSRVEEMNSVKGVEELKPQKKI 241

Query: 171 XXXVSKDLDSITVKNAEELKPGKEAEFKVSRDPDLNKINREEELKPGKDVELKVSKDLDL 230
              VSKDLDSITVKNAEELKPGKEAE KVS+D     + + EELKPGK+ +L V KD  L
Sbjct: 242 EVQVSKDLDSITVKNAEELKPGKEAEMKVSKDLGSITVKKAEELKPGKEADLNVLKD-HL 300

Query: 231 NTINSAAELKPEEESELNVSKDLEEFNTVKNVQELKPEKEAGLRVSKGIEELKLMEAIEE 290
            T+N+   L PE+E E  VS D     TVKNV+ELKPEKEA  RVSKGIEELKL+EAIEE
Sbjct: 301 TTVNNGKALTPEKEIESKVSTDTV-IKTVKNVEELKPEKEAESRVSKGIEELKLLEAIEE 359

Query: 291 MKLKLDGLEAKLNESGITISKLTEERRLNNQEAKILQQKLDDLINKGPRKVQVGFPFLYV 350
           MKLKLDGLE+KLNESG+TISKLTEERRL+NQEAKILQ+KL DLIN GPRKVQVGFP LYV
Sbjct: 360 MKLKLDGLESKLNESGVTISKLTEERRLSNQEAKILQEKLADLINTGPRKVQVGFPLLYV 419

Query: 351 CMVALICVFLGYRLHS 366
           CMVALICVFLGYRLHS
Sbjct: 420 CMVALICVFLGYRLHS 435


>Medtr4g118760.1 | VAMP-associated protein | HC |
           chr4:49201562-49205102 | 20130731
          Length = 294

 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 51/72 (70%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPPD 60
           MQAQR AP DM CKDKFLI ST VP  TT +D+TS +F KD  +Y+EE KLKV LISPP 
Sbjct: 70  MQAQRTAPPDMHCKDKFLIISTVVPFGTTEDDITSDMFAKDTGKYVEEKKLKVVLISPPS 129

Query: 61  SPDFSHTSGESK 72
           SP     +G+ K
Sbjct: 130 SPVLLPVNGDIK 141



 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 8/105 (7%)

Query: 261 NVQELKPEKEAGLRVSKGIEELKLMEAIEEMKLKLDGLEAKLNESGITISKLTEERRLNN 320
           NV ++ PEK+          +L L ++ EE+K +L  +++KL E+   + KL EERR N 
Sbjct: 197 NVGDMSPEKDDV--------QLNLAKSCEELKSRLSMMDSKLRETEAAVMKLNEERRANI 248

Query: 321 QEAKILQQKLDDLINKGPRKVQVGFPFLYVCMVALICVFLGYRLH 365
           +E ++L+Q+L+ L  K   KVQ GFP L+VCMVAL+ V +GY +H
Sbjct: 249 KEKELLKQELEVLKRKSNAKVQAGFPLLFVCMVALVGVAVGYYIH 293


>Medtr4g118760.2 | VAMP-associated protein | HC |
           chr4:49201562-49205102 | 20130731
          Length = 306

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 51/72 (70%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPPD 60
           MQAQR AP DM CKDKFLI ST VP  TT +D+TS +F KD  +Y+EE KLKV LISPP 
Sbjct: 70  MQAQRTAPPDMHCKDKFLIISTVVPFGTTEDDITSDMFAKDTGKYVEEKKLKVVLISPPS 129

Query: 61  SPDFSHTSGESK 72
           SP     +G+ K
Sbjct: 130 SPVLLPVNGDIK 141



 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 20/117 (17%)

Query: 261 NVQELKPEKEAGLRVSKGIEELKLMEAIEEMKLKLDGLEAKLNE------------SGIT 308
           NV ++ PEK+          +L L ++ EE+K +L  +++KL E            +   
Sbjct: 197 NVGDMSPEKDDV--------QLNLAKSCEELKSRLSMMDSKLREVRDPEFRSIIMTTEAA 248

Query: 309 ISKLTEERRLNNQEAKILQQKLDDLINKGPRKVQVGFPFLYVCMVALICVFLGYRLH 365
           + KL EERR N +E ++L+Q+L+ L  K   KVQ GFP L+VCMVAL+ V +GY +H
Sbjct: 249 VMKLNEERRANIKEKELLKQELEVLKRKSNAKVQAGFPLLFVCMVALVGVAVGYYIH 305


>Medtr4g026830.1 | VAMP-associated protein | LC |
           chr4:9255936-9261365 | 20130731
          Length = 214

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPPD 60
           MQA   AP DM CKDKFL+QS       T++D+TS +F KD+   ++E+K +   ++PP 
Sbjct: 89  MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPS 148

Query: 61  SPDFSHTSGESKNGLDHEKVQI 82
           +P    +  +    LD  K QI
Sbjct: 149 NPP---SPVQVSGSLDQAKDQI 167


>Medtr4g027050.1 | VAMP-associated protein | HC |
           chr4:9310428-9306771 | 20130731
          Length = 240

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPPD 60
           MQ Q+ AP DM CKDKFL+QS       T++D+T  +F K++   ++E KL+V  ++PP 
Sbjct: 71  MQGQKEAPPDMQCKDKFLLQSVVASPGATAKDITPEMFNKESGYEVDECKLRVVYVAPPQ 130

Query: 61  SPD 63
            P 
Sbjct: 131 PPS 133


>Medtr5g013320.1 | VAMP-associated protein | HC |
           chr5:4204900-4209367 | 20130731
          Length = 220

 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPPD 60
           +QAQR  P DM CKDKFL+QST V   T  +D+ +  F KD+   IE+ KL+VA I+ P 
Sbjct: 71  LQAQREYPPDMQCKDKFLLQSTIVGPNTDVDDLPANTFNKDSGNSIEDLKLRVAYIT-PS 129

Query: 61  SPDFSHTSGESKNG 74
           SP+ S      KN 
Sbjct: 130 SPEGSSEDDAGKNS 143


>Medtr5g012420.2 | VAMP-associated protein | HC |
           chr5:3721059-3717214 | 20130731
          Length = 171

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 13/105 (12%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPP- 59
           MQAQ+  P DM CKDKFL+QS  V     ++++T  +F K+A   +EE KL+V  ++PP 
Sbjct: 1   MQAQKEVPPDMQCKDKFLLQSVRVNDGADAKEITPEMFNKEAGHVVEECKLRVVYVAPPQ 60

Query: 60  ------------DSPDFSHTSGESKNGLDHEKVQIYSKDEIQSPE 92
                        SP  S T   + NG D   V     +   +PE
Sbjct: 61  PQSPVPESSEEGSSPRGSVTENGNANGSDSTTVMRGFTERNGTPE 105


>Medtr5g012420.1 | VAMP-associated protein | HC |
           chr5:3721097-3717329 | 20130731
          Length = 243

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 13/105 (12%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPP- 59
           MQAQ+  P DM CKDKFL+QS  V     ++++T  +F K+A   +EE KL+V  ++PP 
Sbjct: 73  MQAQKEVPPDMQCKDKFLLQSVRVNDGADAKEITPEMFNKEAGHVVEECKLRVVYVAPPQ 132

Query: 60  ------------DSPDFSHTSGESKNGLDHEKVQIYSKDEIQSPE 92
                        SP  S T   + NG D   V     +   +PE
Sbjct: 133 PQSPVPESSEEGSSPRGSVTENGNANGSDSTTVMRGFTERNGTPE 177


>Medtr4g026620.1 | vesicle-associated protein | HC |
           chr4:9154057-9158270 | 20130731
          Length = 199

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISPPD 60
           MQAQ+ AP +M C DKFLIQS       T+ED+TS +F +D+   +E  KL+V   +PP 
Sbjct: 83  MQAQKKAPPNMHCIDKFLIQSIVAKPGATTEDITSEMFFQDSGYKVEMCKLRVVYDAPP- 141

Query: 61  SPDFSHTSGESKNGLDHEKVQIYSKDEI 88
            P+    +  S+  L    + I +KD+I
Sbjct: 142 -PNLPSPAQASEFDL----LDIQAKDQI 164


>Medtr4g101020.1 | VAMP-associated protein | HC |
           chr4:41712222-41717671 | 20130731
          Length = 242

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 19/140 (13%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALISP-- 58
           MQAQ+ AP DM CKDKFL+QS       + +D+++ +F K+A   +EE KL+V  +SP  
Sbjct: 72  MQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEECKLRVVYVSPPQ 131

Query: 59  -----------PDSPDFSHTSGESKNGLDHEKVQIYSKDEIQSPEAMVKGNFVDAW--DL 105
                        SP  S +   + NG +  +V   ++   + PEA  K     A    L
Sbjct: 132 PPSPVPEGSEEGSSPRGSFSENGNANGPEFAQV---TRGSAERPEAQDKSAEARALISRL 188

Query: 106 KKVENNIVHEV-KLEDDMEL 124
            + +NN + +  +L  ++EL
Sbjct: 189 TEEKNNAIQQTSRLRQELEL 208


>Medtr4g026650.1 | MSP (major sperm protein) domain protein | HC |
           chr4:9169551-9167721 | 20130731
          Length = 177

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 1   MQAQRVAPEDMVCKDKFLIQSTFVPAETTSEDVTSTLFVKDASRYIEENKLKVALIS 57
           MQA   AP DM CKDKFL+QS       T++D+TS +F KD+   ++E+K +   ++
Sbjct: 89  MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVA 145