Miyakogusa Predicted Gene

Lj5g3v1427770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1427770.1 tr|B5X2T2|B5X2T2_SALSA Integral membrane protein
GPR175 OS=Salmo salar GN=GP175 PE=2 SV=1,24.6,0.00000009,seg,NULL;
Tmemb_40,Uncharacterised protein family, transmembrane-40; INTEGRAL
MEMBRANE PROTEIN GPR17,CUFF.55287.1
         (299 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g081910.1 | transmembrane protein, putative | HC | chr1:36...   492   e-139
Medtr4g109480.1 | transmembrane protein, putative | HC | chr4:45...   288   4e-78
Medtr4g109480.3 | transmembrane protein, putative | HC | chr4:45...   210   1e-54
Medtr4g109480.2 | transmembrane protein, putative | HC | chr4:45...   179   3e-45
Medtr4g109480.4 | transmembrane protein, putative | HC | chr4:45...   178   4e-45
Medtr4g109480.5 | transmembrane protein, putative | HC | chr4:45...   178   4e-45

>Medtr1g081910.1 | transmembrane protein, putative | HC |
           chr1:36494702-36498600 | 20130731
          Length = 297

 Score =  492 bits (1267), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/299 (78%), Positives = 262/299 (87%), Gaps = 2/299 (0%)

Query: 1   MVQQSVLAITKQEGSDSSTSAALSAGMFDWVFKCHGFWHNAVLIIASFLFVLYLALQAKQ 60
           MV++SVL+IT ++   SS+S  L+ G  DWVF+CHGFWHNAVLIIASFLFVLYLA QA++
Sbjct: 1   MVEKSVLSITNED--SSSSSGVLTKGFTDWVFECHGFWHNAVLIIASFLFVLYLAFQARK 58

Query: 61  SFRKLSHGRSHIIISYYATLWLVSILNLAWCSFQVWECSPGKELAWNLLSLFTSSGMXXX 120
           SF KL++GRS+IIISYYA+LWLVSILNLAWC  Q WEC+PGKEL WNLLSLFTSSGM   
Sbjct: 59  SFYKLTNGRSYIIISYYASLWLVSILNLAWCFSQAWECTPGKELTWNLLSLFTSSGMLFL 118

Query: 121 XXXXXXXXXQGNNASGLEALTRTFGISGVIVGFDILLKGIYLFAFGIPLFIDTDHSIPHV 180
                    QGNNASG+EALTRTFGISG+IVGFD+LLK IYLFAFG+PLFIDTDH  P +
Sbjct: 119 EVSLLAFLLQGNNASGVEALTRTFGISGIIVGFDVLLKAIYLFAFGVPLFIDTDHGTPRL 178

Query: 181 KWNLWVVHKLVLTLVYGLILFMYHSRWRERLPARPAFYKYVTVMFILNAIALFACGLTGS 240
           KWNLWV+HKLVLT+VYGLILFMYHSRWRERLPARPAFYKYV +MFILNAIALFACGLTG+
Sbjct: 179 KWNLWVIHKLVLTVVYGLILFMYHSRWRERLPARPAFYKYVIIMFILNAIALFACGLTGN 238

Query: 241 GAAFGFWFYRVTVVCYHAFYLPLLYITFLADFFQEEDLNLENVYYSEMKDAGFFESDWN 299
           GA FGFWFY VT+V YHAFYLPLLYITFLADFFQEED ++ENVYYSEMKDAGFFESDW 
Sbjct: 239 GAGFGFWFYHVTIVSYHAFYLPLLYITFLADFFQEEDFHMENVYYSEMKDAGFFESDWE 297


>Medtr4g109480.1 | transmembrane protein, putative | HC |
           chr4:45483583-45488552 | 20130731
          Length = 286

 Score =  288 bits (738), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 150/262 (57%), Positives = 182/262 (69%), Gaps = 2/262 (0%)

Query: 39  HNAVLIIASFLFVLYLALQAKQSFRKLSHGRSHIIISYYATLWLVSILNLAWCSFQVWEC 98
           H+  +  +S LFVLYLAL+AK++   L +G S+II SYYA LW+V++LNLAW   Q W+C
Sbjct: 24  HDTFVAASSVLFVLYLALKAKKNINSLCNGGSYIIASYYALLWIVTLLNLAWSFLQAWQC 83

Query: 99  SPGKELAWNLLSLFTSSGMXXXXXXXXXXXXQGNNASGLEA--LTRTFGISGVIVGFDIL 156
           SPGKELAWN L+LFT+SGM              N  +G+EA  L  T  +SG+IV  D L
Sbjct: 84  SPGKELAWNALTLFTTSGMLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTL 143

Query: 157 LKGIYLFAFGIPLFIDTDHSIPHVKWNLWVVHKLVLTLVYGLILFMYHSRWRERLPARPA 216
           LK IY+F FG+PLF     S   +KW LW VHKL+L   YG ILF + S+WRE+LP RP 
Sbjct: 144 LKAIYVFGFGVPLFNRNVGSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPPRPT 203

Query: 217 FYKYVTVMFILNAIALFACGLTGSGAAFGFWFYRVTVVCYHAFYLPLLYITFLADFFQEE 276
           FY YV VMFI +AI LFACGL G GA  G W Y  TV+CYH+ YLP LY TFLADFFQEE
Sbjct: 204 FYNYVVVMFIFSAITLFACGLAGIGAGLGNWLYDFTVLCYHSLYLPFLYATFLADFFQEE 263

Query: 277 DLNLENVYYSEMKDAGFFESDW 298
           D  L+N YYSEMKDAGFF+++W
Sbjct: 264 DFLLDNAYYSEMKDAGFFDAEW 285


>Medtr4g109480.3 | transmembrane protein, putative | HC |
           chr4:45483583-45488552 | 20130731
          Length = 234

 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 107/199 (53%), Positives = 133/199 (66%), Gaps = 2/199 (1%)

Query: 39  HNAVLIIASFLFVLYLALQAKQSFRKLSHGRSHIIISYYATLWLVSILNLAWCSFQVWEC 98
           H+  +  +S LFVLYLAL+AK++   L +G S+II SYYA LW+V++LNLAW   Q W+C
Sbjct: 24  HDTFVAASSVLFVLYLALKAKKNINSLCNGGSYIIASYYALLWIVTLLNLAWSFLQAWQC 83

Query: 99  SPGKELAWNLLSLFTSSGMXXXXXXXXXXXXQGNNASGLEA--LTRTFGISGVIVGFDIL 156
           SPGKELAWN L+LFT+SGM              N  +G+EA  L  T  +SG+IV  D L
Sbjct: 84  SPGKELAWNALTLFTTSGMLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTL 143

Query: 157 LKGIYLFAFGIPLFIDTDHSIPHVKWNLWVVHKLVLTLVYGLILFMYHSRWRERLPARPA 216
           LK IY+F FG+PLF     S   +KW LW VHKL+L   YG ILF + S+WRE+LP RP 
Sbjct: 144 LKAIYVFGFGVPLFNRNVGSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPPRPT 203

Query: 217 FYKYVTVMFILNAIALFAC 235
           FY YV VMFI +AI LFAC
Sbjct: 204 FYNYVVVMFIFSAITLFAC 222


>Medtr4g109480.2 | transmembrane protein, putative | HC |
           chr4:45483583-45488552 | 20130731
          Length = 240

 Score =  179 bits (454), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/190 (49%), Positives = 121/190 (63%), Gaps = 2/190 (1%)

Query: 39  HNAVLIIASFLFVLYLALQAKQSFRKLSHGRSHIIISYYATLWLVSILNLAWCSFQVWEC 98
           H+  +  +S LFVLYLAL+AK++   L +G S+II SYYA LW+V++LNLAW   Q W+C
Sbjct: 24  HDTFVAASSVLFVLYLALKAKKNINSLCNGGSYIIASYYALLWIVTLLNLAWSFLQAWQC 83

Query: 99  SPGKELAWNLLSLFTSSGMXXXXXXXXXXXXQGNNASGLE--ALTRTFGISGVIVGFDIL 156
           SPGKELAWN L+LFT+SGM              N  +G+E  AL  T  +SG+IV  D L
Sbjct: 84  SPGKELAWNALTLFTTSGMLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTL 143

Query: 157 LKGIYLFAFGIPLFIDTDHSIPHVKWNLWVVHKLVLTLVYGLILFMYHSRWRERLPARPA 216
           LK IY+F FG+PLF     S   +KW LW VHKL+L   YG ILF + S+WRE+LP    
Sbjct: 144 LKAIYVFGFGVPLFNRNVGSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPRCMI 203

Query: 217 FYKYVTVMFI 226
              YV  ++I
Sbjct: 204 LLYYVITLYI 213


>Medtr4g109480.4 | transmembrane protein, putative | HC |
           chr4:45483583-45488552 | 20130731
          Length = 213

 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/185 (49%), Positives = 119/185 (64%), Gaps = 2/185 (1%)

Query: 39  HNAVLIIASFLFVLYLALQAKQSFRKLSHGRSHIIISYYATLWLVSILNLAWCSFQVWEC 98
           H+  +  +S LFVLYLAL+AK++   L +G S+II SYYA LW+V++LNLAW   Q W+C
Sbjct: 24  HDTFVAASSVLFVLYLALKAKKNINSLCNGGSYIIASYYALLWIVTLLNLAWSFLQAWQC 83

Query: 99  SPGKELAWNLLSLFTSSGMXXXXXXXXXXXXQGNNASGLE--ALTRTFGISGVIVGFDIL 156
           SPGKELAWN L+LFT+SGM              N  +G+E  AL  T  +SG+IV  D L
Sbjct: 84  SPGKELAWNALTLFTTSGMLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTL 143

Query: 157 LKGIYLFAFGIPLFIDTDHSIPHVKWNLWVVHKLVLTLVYGLILFMYHSRWRERLPARPA 216
           LK IY+F FG+PLF     S   +KW LW VHKL+L   YG ILF + S+WRE+LP    
Sbjct: 144 LKAIYVFGFGVPLFNRNVGSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPREYT 203

Query: 217 FYKYV 221
           ++  V
Sbjct: 204 YFNTV 208


>Medtr4g109480.5 | transmembrane protein, putative | HC |
           chr4:45483583-45488552 | 20130731
          Length = 213

 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/185 (49%), Positives = 119/185 (64%), Gaps = 2/185 (1%)

Query: 39  HNAVLIIASFLFVLYLALQAKQSFRKLSHGRSHIIISYYATLWLVSILNLAWCSFQVWEC 98
           H+  +  +S LFVLYLAL+AK++   L +G S+II SYYA LW+V++LNLAW   Q W+C
Sbjct: 24  HDTFVAASSVLFVLYLALKAKKNINSLCNGGSYIIASYYALLWIVTLLNLAWSFLQAWQC 83

Query: 99  SPGKELAWNLLSLFTSSGMXXXXXXXXXXXXQGNNASGLE--ALTRTFGISGVIVGFDIL 156
           SPGKELAWN L+LFT+SGM              N  +G+E  AL  T  +SG+IV  D L
Sbjct: 84  SPGKELAWNALTLFTTSGMLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTL 143

Query: 157 LKGIYLFAFGIPLFIDTDHSIPHVKWNLWVVHKLVLTLVYGLILFMYHSRWRERLPARPA 216
           LK IY+F FG+PLF     S   +KW LW VHKL+L   YG ILF + S+WRE+LP    
Sbjct: 144 LKAIYVFGFGVPLFNRNVGSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPREYT 203

Query: 217 FYKYV 221
           ++  V
Sbjct: 204 YFNTV 208