Miyakogusa Predicted Gene
- Lj5g3v1427760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1427760.1 CUFF.55353.1
(108 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g081900.2 | Na+/H+ exchanger 1 | HC | chr1:36488123-364931... 154 2e-38
Medtr1g081900.1 | Na+/H+ exchanger 1 | HC | chr1:36488123-364931... 154 2e-38
Medtr7g114250.1 | cation/H+ exchanger 3 | HC | chr7:47138109-471... 123 4e-29
Medtr4g118770.1 | Na+/H+ exchanger 1 | HC | chr4:49209584-492057... 108 1e-24
Medtr1g082440.1 | Na+/H+ exchanger 1 | HC | chr1:36646969-366510... 79 1e-15
Medtr3g055600.1 | Na+/H+ exchanger 1 | HC | chr3:21875603-218698... 71 2e-13
Medtr1g082450.1 | Na+/H+ exchanger 1 | HC | chr1:36652074-366556... 68 2e-12
>Medtr1g081900.2 | Na+/H+ exchanger 1 | HC | chr1:36488123-36493178
| 20130731
Length = 541
Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MLTKPLIRLLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRA 60
+LTKPLIRLLLPH + + + +TPKSF VPLLG ++DS D + HEI RP+S+RA
Sbjct: 436 LLTKPLIRLLLPHPKITSSMTTT-ESTTPKSFIVPLLGDSRDSEADLEGHEIHRPNSLRA 494
Query: 61 LLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRSNGHQW 107
LLSTPTHTVHRLWRKFD+SFMRPVFGGRGFVPVEPGSPS+R NG+QW
Sbjct: 495 LLSTPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPSER-NGNQW 540
>Medtr1g081900.1 | Na+/H+ exchanger 1 | HC | chr1:36488123-36493178
| 20130731
Length = 541
Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MLTKPLIRLLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRA 60
+LTKPLIRLLLPH + + + +TPKSF VPLLG ++DS D + HEI RP+S+RA
Sbjct: 436 LLTKPLIRLLLPHPKITSSMTTT-ESTTPKSFIVPLLGDSRDSEADLEGHEIHRPNSLRA 494
Query: 61 LLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRSNGHQW 107
LLSTPTHTVHRLWRKFD+SFMRPVFGGRGFVPVEPGSPS+R NG+QW
Sbjct: 495 LLSTPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPSER-NGNQW 540
>Medtr7g114250.1 | cation/H+ exchanger 3 | HC |
chr7:47138109-47134018 | 20130731
Length = 544
Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 83/114 (72%), Gaps = 7/114 (6%)
Query: 1 MLTKPLIRLLLP--HTDTKTDSMASLDPSTPKSFTVPLLGSAQDS-----VGDFDAHEIR 53
M+TKPLIR L+P H + +S+A+L+ S+PKS TVP LG QDS D DA++
Sbjct: 430 MMTKPLIRFLIPLGHPPKQKNSLANLEESSPKSITVPFLGGRQDSEEVDNDNDNDANDSH 489
Query: 54 RPSSIRALLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSPSDRSNGHQW 107
RPSSIR LL+TPTHTVHRLWRKFD++ MRPVFGGRGFVPV P SP++ QW
Sbjct: 490 RPSSIRDLLTTPTHTVHRLWRKFDDAIMRPVFGGRGFVPVVPTSPTESDCQLQW 543
>Medtr4g118770.1 | Na+/H+ exchanger 1 | HC | chr4:49209584-49205784
| 20130731
Length = 529
Score = 108 bits (270), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Query: 1 MLTKPLIRLLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRA 60
++TKPL+RLLLP + PS+PKSF+VPLLG+ +D G+ +RPS +R
Sbjct: 435 LMTKPLVRLLLP-SSKHIIISIPSPPSSPKSFSVPLLGNGEDVGGNGGT---QRPSRLRT 490
Query: 61 LLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSP 98
LL P+H VH WRKFD+SFMRPVFGGRGFVP PGSP
Sbjct: 491 LLRIPSHGVHHYWRKFDDSFMRPVFGGRGFVPYVPGSP 528
>Medtr1g082440.1 | Na+/H+ exchanger 1 | HC | chr1:36646969-36651054
| 20130731
Length = 536
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 2 LTKPLIRLLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRAL 61
+TKPLI + + K A D + + LL + S+ RR S++ +
Sbjct: 437 ITKPLIEAV----NLKHSKPAISDSTDNQEDLRLLLLESNSSINQSINQSNRRRSNLSLM 492
Query: 62 LSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSP 98
+ PT TVH WRKFD+ FMRPVFGGRGFVPV PGSP
Sbjct: 493 MRYPTTTVHYFWRKFDDKFMRPVFGGRGFVPVVPGSP 529
>Medtr3g055600.1 | Na+/H+ exchanger 1 | HC | chr3:21875603-21869888
| 20130731
Length = 532
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 2 LTKPLIRLLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRAL 61
LTKPL+R LLPH T+ ++ S + +PLL + + + R S+ L
Sbjct: 443 LTKPLVRYLLPHHATRVNTNHEESTSPVEDMNLPLLSFEESAATNIS----RAKESLSML 498
Query: 62 LSTPTHTVHRLWRKFDNSFMRPVFGG 87
+P +T+H WR+FD+S+MRP+FGG
Sbjct: 499 FESPVYTIHYYWRRFDDSYMRPLFGG 524
>Medtr1g082450.1 | Na+/H+ exchanger 1 | HC | chr1:36652074-36655685
| 20130731
Length = 531
Score = 67.8 bits (164), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 2 LTKPLIR-LLLPHTDTKTDSMASLDPSTPKSFTVPLLGSAQDSVGDFDAHEIRRPSSIRA 60
+TKPLI +LL H+ T A F + DS+ + +R
Sbjct: 437 ITKPLIEAVLLKHSKQTTSDSADYHEELGLLFL-----ESNDSIEQSNNQPF-----LRW 486
Query: 61 LLSTPTHTVHRLWRKFDNSFMRPVFGGRGFVPVEPGSP 98
++ P TVH WR+FD++FMRP+FGG GFVPV PG+P
Sbjct: 487 MMRYPATTVHYFWRQFDDNFMRPIFGGWGFVPVVPGTP 524