Miyakogusa Predicted Gene

Lj5g3v1427730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1427730.1 Non Characterized Hit- tr|I1LBG9|I1LBG9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,35.58,0.0000000000001,seg,NULL,CUFF.55240.1
         (661 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g081850.1 | hypothetical protein | LC | chr1:36451154-3645...   120   3e-27

>Medtr1g081850.1 | hypothetical protein | LC |
           chr1:36451154-36453660 | 20130731
          Length = 665

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 140/367 (38%), Positives = 179/367 (48%), Gaps = 87/367 (23%)

Query: 1   MAEYAFRYRSVSTYSTVKNQTQGPA-IKPFAPFIPKT-NGNSSPEGHVTKKTIVPVTSKT 58
           M EY + YRS+STYST++N  + PA IKPF PF PK+ NG++  EG V  K IVPVT + 
Sbjct: 1   MGEYGYAYRSISTYSTIRNGIREPAVIKPFVPFNPKSNNGSNYSEGAVNSKKIVPVTGRP 60

Query: 59  YXXXXXXHNSAPVHQAHPSEA----DDKWHDKTSLVRGSPRKVNDFLSPTKVKN--EPSH 112
           Y          P  + +PS      DD+   + S V  SPRKV D   P KV+   E SH
Sbjct: 61  Y--------DEPATEKYPSSEDEFDDDERRRQLSPVHSSPRKV-DVQFPAKVQQNHEGSH 111

Query: 113 -PQRFSPRTPTVTR-HHSPQP----------TTAYN-----GTNH-YGSNKEGHKPIGGT 154
            PQR+    P V R  H+PQP          +T  N     GTN+ YG +++G KPIG +
Sbjct: 112 DPQRYG---PIVDRGRHTPQPSADGRKPIGGSTVNNHNDSYGTNYPYGGDRDGRKPIGIS 168

Query: 155 -IRN------DNHDGYDHNGTNNGYGDYGSKKEGHNPIGGTIRKXXXXXXXXXXXXXXXX 207
            I+N       N  G  H  T    GD    K+   PIGG I                  
Sbjct: 169 PIKNRKYGGGPNGYGGAHRAT--AIGDPSPHKDRRKPIGGGI---------MSSDDGYNN 217

Query: 208 XFGSNKEGHMPFG-SAIRNDNYNGTNHPSRGDNHGSS--------KEGRKPIRGTIRNDN 258
            +G +K+G  P G S ++ND Y+GTN    G +H ++        KEGRKPI G      
Sbjct: 218 GYGGDKDGRRPIGISPVKNDKYDGTN--GYGSDHRATPVGDPNPYKEGRKPIGGGNLRST 275

Query: 259 HDGSNYDGTNNGHGDYGRDHKEGYKPFG-STIRNENYDGTNNGFGG------YGSKN--- 308
           HDG + +G       YG D  +G+KP G S  R+ NYDG  NGFGG       G  N   
Sbjct: 276 HDGYHDNG-------YGGD--KGHKPIGISPTRSNNYDGP-NGFGGDHRATSVGDPNPYQ 325

Query: 309 EGHKPLG 315
           EG KP+G
Sbjct: 326 EGRKPIG 332



 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 88/201 (43%), Gaps = 27/201 (13%)

Query: 466 NKKEGQKHTSLPIRTENY-DGYGTIGIGNNREKQSPYGSNTRNHDDHDYGDSVNYINREK 524
           NKKEG K    P R  NY +GYG   I N+ +K     SN + +DD D  ++ NY N   
Sbjct: 486 NKKEGYK----PTRNGNYGNGYG---ISNHNDKPFVSSSNPK-YDDGD--NAANYYNNRS 535

Query: 525 HKPSGGVGGLTRPNFTSAWTAAPRKGTQLSEPTHDIGXXXXXXXXXXXXXXXPNGHGSSS 584
           +           P   S WTAAPRKGTQLSEP HDI                 +   S +
Sbjct: 536 N--------FNGPKINSYWTAAPRKGTQLSEPIHDIDKAMELLKMEAAKRDQQH---SPT 584

Query: 585 SGELTSQF-DR-GMDLVKEPELLKNIVTGAPPQSRYPVPNKDEYDRRNATRGYEHSSRQP 642
            G  + +F DR G      P    N +   P  S+  V   D+    +          + 
Sbjct: 585 PGNASPRFTDRTGSGAAMRPYGNVNQLQSRPRDSQTRVTFIDDASDYDDDYYRRDDRGRY 644

Query: 643 GL---VIDSKEAEQRFRGARV 660
           G    VIDS+EAE++F+G RV
Sbjct: 645 GFHDAVIDSREAEKKFKGTRV 665