Miyakogusa Predicted Gene

Lj5g3v1426460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1426460.1 Non Characterized Hit- tr|I1NIU8|I1NIU8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.23,1e-18,seg,NULL;
WIYLD,WIYLD domain,CUFF.55235.1
         (234 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g081780.1 | ubiquitin-binding WIYLD domain protein | HC | ...   189   2e-48
Medtr1g111690.1 | ubiquitin-binding WIYLD domain protein | LC | ...    92   3e-19
Medtr6g033440.1 | ubiquitin-binding WIYLD domain protein | LC | ...    85   8e-17
Medtr1g111700.1 | ubiquitin-binding WIYLD domain protein | LC | ...    83   2e-16
Medtr5g082250.1 | ubiquitin-binding WIYLD domain protein | HC | ...    73   3e-13
Medtr1g014445.1 | hypothetical protein | HC | chr1:2944226-29437...    52   4e-07

>Medtr1g081780.1 | ubiquitin-binding WIYLD domain protein | HC |
           chr1:36393981-36397256 | 20130731
          Length = 295

 Score =  189 bits (479), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/263 (46%), Positives = 146/263 (55%), Gaps = 59/263 (22%)

Query: 1   MAPRRKVQKGTTRMDAALDAMTPYGFPRRIVRRTVDQLLKVYGDEGWFFIEDCAYRTLIE 60
           MAPR + +KG  RMDAALDAM P+GFP ++VR+TVDQLLKVY D  W FIE+ AY  LI+
Sbjct: 1   MAPRGRPKKGERRMDAALDAMIPFGFPNKLVRQTVDQLLKVY-DGSWVFIEEHAYTLLID 59

Query: 61  KLLE------LPQETDDLSEDKPGDGPNEASAAGCSN-VALVPC-SNTQTSYDAPLTNQV 112
            LLE        Q  D L E  PG+GPNEASA+GCSN   L+PC SN   S DAPL +Q 
Sbjct: 60  TLLEKQQNQNQNQNQDCLIEGNPGNGPNEASASGCSNRTLLLPCSSNMDASDDAPLPSQA 119

Query: 113 ADTISASSET-----------------------------------DNQLAIKAVDT-VST 136
             TISA+SET                                    NQL+I A DT  + 
Sbjct: 120 VGTISAASETGHQLPMTVDTASATSKAVIELPIKPVNNSATTSQPSNQLSIMAADTETAA 179

Query: 137 SEAGAELLIKAVDIPSVTSEPGNQLSIKATDIVPADIEYD----CKPVLS---------- 182
           S+   EL IK VD  SVTS+P N  SIKA   V A  E +     K ++           
Sbjct: 180 SKTVNELPIKPVDTSSVTSQPSNPPSIKAVGTVSATNEINNQVPSKAIIETVSADNGYEI 239

Query: 183 PLSKSSQPVRKLCHKKRKPCHGW 205
           P +KSSQP+ KLCHKKR+PCHGW
Sbjct: 240 PQTKSSQPIGKLCHKKRRPCHGW 262


>Medtr1g111690.1 | ubiquitin-binding WIYLD domain protein | LC |
           chr1:50505629-50509515 | 20130731
          Length = 426

 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/105 (46%), Positives = 73/105 (69%), Gaps = 4/105 (3%)

Query: 1   MAPRRK-VQKGTTRMDAALDAMTPYGFPRRIVRRTVDQLLKVY-GDEGWFFIEDCAYRTL 58
           MAPRR+ ++KG +RMDAALDAMTP GF ++++ +TV++LLK+Y G+EGW FIED AY  L
Sbjct: 1   MAPRRRPLKKGDSRMDAALDAMTPLGFDKKLIHQTVNKLLKIYDGNEGWHFIEDGAYCLL 60

Query: 59  IEKLLELPQETDD--LSEDKPGDGPNEASAAGCSNVALVPCSNTQ 101
           I++LLE  Q+ ++  + E +  D   +AS +  +       S+TQ
Sbjct: 61  IDQLLEAQQDQEEQHIRETRREDLTQKASMSNSTGRITRSKSSTQ 105


>Medtr6g033440.1 | ubiquitin-binding WIYLD domain protein | LC |
          chr6:10787262-10786634 | 20130731
          Length = 108

 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 54/66 (81%), Gaps = 2/66 (3%)

Query: 1  MAPRRK-VQKGTTRMDAALDAMTPYGFPRRIVRRTVDQLLKVY-GDEGWFFIEDCAYRTL 58
          MAPRR+ ++KG +RM+AALDAMTP GF +++V +TV++LLKVY   EGW FIED AY  L
Sbjct: 1  MAPRRRPLKKGESRMNAALDAMTPLGFDKKLVHQTVNKLLKVYDSSEGWGFIEDGAYHLL 60

Query: 59 IEKLLE 64
          I++LLE
Sbjct: 61 IDQLLE 66


>Medtr1g111700.1 | ubiquitin-binding WIYLD domain protein | LC |
          chr1:50512723-50513299 | 20130731
          Length = 76

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 2/73 (2%)

Query: 1  MAP-RRKVQKGTTRMDAALDAMTPYGFPRRIVRRTVDQLLKVYG-DEGWFFIEDCAYRTL 58
          M P RR ++KG +RMDAALDAMT  GF +++V +TV++LLKVYG +EGW FIED  YR L
Sbjct: 1  MEPSRRPLKKGGSRMDAALDAMTALGFDKKVVHQTVNKLLKVYGSNEGWVFIEDGDYRLL 60

Query: 59 IEKLLELPQETDD 71
          I++LLE  Q+  +
Sbjct: 61 IDQLLEAQQQDQE 73


>Medtr5g082250.1 | ubiquitin-binding WIYLD domain protein | HC |
           chr5:35344826-35347431 | 20130731
          Length = 225

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 34/197 (17%)

Query: 10  GTTRMDAALDAMTPYGFPRRIVRRTVDQLLKVY-GDEGWFFIEDCAYRTLIEKLLELPQE 68
           G TRMDAALDAM   GF  +I+R TV++LL VY G++GW FIE+ +Y+ LIE +L     
Sbjct: 14  GNTRMDAALDAMRQLGFEEKIIRDTVEELLDVYEGNQGWPFIEEGSYKLLIETIL---CN 70

Query: 69  TDDLSEDKPGDGPNEASAAGCSNVALVPCSNTQTSYDAPLTNQVADTISASSETDNQLAI 128
            D+  +D   DG  E S+A      +    ++       +T    D  SAS   D+    
Sbjct: 71  CDENKDDARQDGVGETSSAATPATGITEVGSSYLVPQDYVTRGNDDLDSASQTNDHDHDF 130

Query: 129 KAVDTVSTSEAGAELLIKAVDIPSVTSEPGNQLSIKATDIVPADIEYDCKPVLSPLSKSS 188
             +  V   +AG                      +K T +  ++ E       + +S   
Sbjct: 131 APIGNVE-EDAG----------------------VKNTTVRESNHE-------TFVSNVE 160

Query: 189 QPVRKLCHKKRKPCHGW 205
               KL   + +PC+GW
Sbjct: 161 ATTDKLPQSRYRPCYGW 177


>Medtr1g014445.1 | hypothetical protein | HC | chr1:2944226-2943735
           | 20130731
          Length = 133

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 28/115 (24%)

Query: 103 SYDAPLTNQVADTISASSETDN----------QLAIKAVDT-VSTSEAGAELLIKAVDIP 151
           S DAPL +Q   TISA+SET +          QL+I A DT  + S+   EL IKA+   
Sbjct: 4   SDDAPLPSQAVGTISAASETASAISKAVIELKQLSIMAEDTETAASKTVNELPIKAIVTV 63

Query: 152 SVTSEPGNQLSIKA-TDIVPADIEYDCKPVLSPLSKSSQPVRKLCHKKRKPCHGW 205
           S T+E  NQ+ IKA  + V AD  Y+                    K+R+PCHGW
Sbjct: 64  SATNEINNQVPIKAIIETVSADNGYEIPQT----------------KRRRPCHGW 102