Miyakogusa Predicted Gene

Lj5g3v1415350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1415350.1 Non Characterized Hit- tr|I3SI93|I3SI93_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,90.16,0,no
description,NULL; CAROTENE DESATURASE,NULL; AMINE OXIDASE,NULL;
FAD/NAD(P)-binding domain,NULL;
A,NODE_30126_length_2333_cov_127.511360.path2.1
         (577 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g081290.1 | zeta-carotene desaturase | HC | chr1:36179133-...  1092   0.0  
Medtr1g081290.2 | zeta-carotene desaturase | HC | chr1:36179133-...  1013   0.0  
Medtr1g081290.3 | zeta-carotene desaturase | HC | chr1:36179133-...   852   0.0  
Medtr3g084830.1 | phytoene dehydrogenase/chromoplastic protein |...   166   6e-41
Medtr3g084850.1 | phytoene dehydrogenase/chromoplastic protein |...    80   5e-15
Medtr3g084850.2 | phytoene dehydrogenase/chromoplastic protein |...    80   7e-15

>Medtr1g081290.1 | zeta-carotene desaturase | HC |
           chr1:36179133-36173413 | 20130731
          Length = 579

 Score = 1092 bits (2824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/581 (91%), Positives = 553/581 (95%), Gaps = 7/581 (1%)

Query: 1   MASLIHCPAATSLSATR-GDSVGFLVPSSSRFIKT--HKCRVRCSLDSNVSDMSVNAPKG 57
           M SLIHCPA TSLS TR GDSV F VPS  RF KT  +K RVRCSLDSNVSDMS NAPKG
Sbjct: 2   MTSLIHCPA-TSLSTTRPGDSVAFFVPS--RFTKTRSYKPRVRCSLDSNVSDMSTNAPKG 58

Query: 58  LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDKRG 117
           LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESR FIGGKVGSFVDKRG
Sbjct: 59  LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRG 118

Query: 118 NHIEMGLHVFFGCYNNLFRLMKKVGAENNLLVKDHTHTFVNTGGQIGELDFRFPIGAPLH 177
           NHIEMGLHVFFGCYNNLFRL+KKVGAENNLLVKDHTHTFVN GGQIGELDFRFP+GAPLH
Sbjct: 119 NHIEMGLHVFFGCYNNLFRLLKKVGAENNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLH 178

Query: 178 GITAFLTTNQLKTYDKARNALALALSPVVRALVDPDGALRDIRNLDSVSFSDWFLSKGGT 237
           GI AFLTTNQLKTYDKARNA+ALALSPVVRALVDPDGALRDIRNLDSVSFSDWF+SKGGT
Sbjct: 179 GINAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALRDIRNLDSVSFSDWFMSKGGT 238

Query: 238 RTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIR 297
           RTSI+KMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIR
Sbjct: 239 RTSIKKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIR 298

Query: 298 KYITDRGGRFHLRWGCREILYDESADGSTYVKGLSMSKATAKQIVKADAYVAACDVPGIK 357
           KYITDRGGRFHLRWGCRE+LYD+SADGSTYV GLS+SKAT K+IV+ADAYVAACDVPGIK
Sbjct: 299 KYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSLSKATEKKIVEADAYVAACDVPGIK 358

Query: 358 RLIPSEWRENEFFNNIYELVGVPVVTVQLRYNGWVTELQNLEKSRQLKKATGLDNLLYTP 417
           RL+PSEWRE EFFNNIYELVGVPVVTVQLRYNGWVTELQNLE SRQLKKATGLDNLLYTP
Sbjct: 359 RLLPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNLELSRQLKKATGLDNLLYTP 418

Query: 418 DADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPSS 477
           DADFSCFADLAL SPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEII+RVAKQVISLFPSS
Sbjct: 419 DADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSS 478

Query: 478 QGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSG 537
           QGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFL+GSYTKQDYIDSMEGATLSG
Sbjct: 479 QGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSG 538

Query: 538 RQASACICDAGEELLTLRKK-LDEFEDDLQISNTKDELSLV 577
           RQ SA ICDAGEEL+ LRK+ L + +DD++ +NTKDELSLV
Sbjct: 539 RQTSAYICDAGEELVALRKELLAQSKDDIKFTNTKDELSLV 579


>Medtr1g081290.2 | zeta-carotene desaturase | HC |
           chr1:36179133-36173413 | 20130731
          Length = 557

 Score = 1013 bits (2620), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/525 (92%), Positives = 504/525 (96%), Gaps = 2/525 (0%)

Query: 1   MASLIHCPAATSLSATR-GDSVGFLVPSSSRFIKTHKCRVRCSLDSNVSDMSVNAPKGLF 59
           M SLIHCPA TSLS TR GDSV F VPS     +++K RVRCSLDSNVSDMS NAPKGLF
Sbjct: 2   MTSLIHCPA-TSLSTTRPGDSVAFFVPSRFTKTRSYKPRVRCSLDSNVSDMSTNAPKGLF 60

Query: 60  PPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDKRGNH 119
           PPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESR FIGGKVGSFVDKRGNH
Sbjct: 61  PPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNH 120

Query: 120 IEMGLHVFFGCYNNLFRLMKKVGAENNLLVKDHTHTFVNTGGQIGELDFRFPIGAPLHGI 179
           IEMGLHVFFGCYNNLFRL+KKVGAENNLLVKDHTHTFVN GGQIGELDFRFP+GAPLHGI
Sbjct: 121 IEMGLHVFFGCYNNLFRLLKKVGAENNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGI 180

Query: 180 TAFLTTNQLKTYDKARNALALALSPVVRALVDPDGALRDIRNLDSVSFSDWFLSKGGTRT 239
            AFLTTNQLKTYDKARNA+ALALSPVVRALVDPDGALRDIRNLDSVSFSDWF+SKGGTRT
Sbjct: 181 NAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALRDIRNLDSVSFSDWFMSKGGTRT 240

Query: 240 SIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKY 299
           SI+KMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKY
Sbjct: 241 SIKKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKY 300

Query: 300 ITDRGGRFHLRWGCREILYDESADGSTYVKGLSMSKATAKQIVKADAYVAACDVPGIKRL 359
           ITDRGGRFHLRWGCRE+LYD+SADGSTYV GLS+SKAT K+IV+ADAYVAACDVPGIKRL
Sbjct: 301 ITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSLSKATEKKIVEADAYVAACDVPGIKRL 360

Query: 360 IPSEWRENEFFNNIYELVGVPVVTVQLRYNGWVTELQNLEKSRQLKKATGLDNLLYTPDA 419
           +PSEWRE EFFNNIYELVGVPVVTVQLRYNGWVTELQNLE SRQLKKATGLDNLLYTPDA
Sbjct: 361 LPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNLELSRQLKKATGLDNLLYTPDA 420

Query: 420 DFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPSSQG 479
           DFSCFADLAL SPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEII+RVAKQVISLFPSSQG
Sbjct: 421 DFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQG 480

Query: 480 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQ 524
           LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFL+GSYTKQ
Sbjct: 481 LEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQ 525


>Medtr1g081290.3 | zeta-carotene desaturase | HC |
           chr1:36179133-36173415 | 20130731
          Length = 446

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/446 (92%), Positives = 425/446 (95%), Gaps = 2/446 (0%)

Query: 1   MASLIHCPAATSLSATR-GDSVGFLVPSSSRFIKTHKCRVRCSLDSNVSDMSVNAPKGLF 59
           M SLIHCPA TSLS TR GDSV F VPS     +++K RVRCSLDSNVSDMS NAPKGLF
Sbjct: 2   MTSLIHCPA-TSLSTTRPGDSVAFFVPSRFTKTRSYKPRVRCSLDSNVSDMSTNAPKGLF 60

Query: 60  PPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDKRGNH 119
           PPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESR FIGGKVGSFVDKRGNH
Sbjct: 61  PPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNH 120

Query: 120 IEMGLHVFFGCYNNLFRLMKKVGAENNLLVKDHTHTFVNTGGQIGELDFRFPIGAPLHGI 179
           IEMGLHVFFGCYNNLFRL+KKVGAENNLLVKDHTHTFVN GGQIGELDFRFP+GAPLHGI
Sbjct: 121 IEMGLHVFFGCYNNLFRLLKKVGAENNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGI 180

Query: 180 TAFLTTNQLKTYDKARNALALALSPVVRALVDPDGALRDIRNLDSVSFSDWFLSKGGTRT 239
            AFLTTNQLKTYDKARNA+ALALSPVVRALVDPDGALRDIRNLDSVSFSDWF+SKGGTRT
Sbjct: 181 NAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALRDIRNLDSVSFSDWFMSKGGTRT 240

Query: 240 SIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKY 299
           SI+KMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKY
Sbjct: 241 SIKKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKY 300

Query: 300 ITDRGGRFHLRWGCREILYDESADGSTYVKGLSMSKATAKQIVKADAYVAACDVPGIKRL 359
           ITDRGGRFHLRWGCRE+LYD+SADGSTYV GLS+SKAT K+IV+ADAYVAACDVPGIKRL
Sbjct: 301 ITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSLSKATEKKIVEADAYVAACDVPGIKRL 360

Query: 360 IPSEWRENEFFNNIYELVGVPVVTVQLRYNGWVTELQNLEKSRQLKKATGLDNLLYTPDA 419
           +PSEWRE EFFNNIYELVGVPVVTVQLRYNGWVTELQNLE SRQLKKATGLDNLLYTPDA
Sbjct: 361 LPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNLELSRQLKKATGLDNLLYTPDA 420

Query: 420 DFSCFADLALTSPEDYYIEGQGSLLQ 445
           DFSCFADLAL SPEDYYIEGQGSLLQ
Sbjct: 421 DFSCFADLALASPEDYYIEGQGSLLQ 446


>Medtr3g084830.1 | phytoene dehydrogenase/chromoplastic protein | HC
           | chr3:38318107-38322992 | 20130731
          Length = 423

 Score =  166 bits (420), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 176/349 (50%), Gaps = 18/349 (5%)

Query: 40  RCSLDSNVSDMSVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIY 99
           R  LD  V+ +  +     F   P   +   LKV I GAGLAG+STA  L D GH+  + 
Sbjct: 82  RPELDDTVNFIEASYLSSTFRASPRPTK--PLKVVIAGAGLAGLSTAKYLADAGHKPILL 139

Query: 100 ESRPFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAENNLLVKDHTHTFV-- 157
           E+R  +GGKV ++ D+ G+  E GLH+FFG Y N+  L  ++G  + L  K+H+  F   
Sbjct: 140 EARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMP 199

Query: 158 NTGGQIGELDFRFPIGAPLHGITAFLTTNQLKTYDKARNALALALSPVVRALVDPDGALR 217
           +  G+    DF   + +PL+GI A L  N++ T+ + +   A+ L P +       G   
Sbjct: 200 SKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLTWPE-KIKFAIGLLPAML------GGQA 252

Query: 218 DIRNLDSVSFSDWFLSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTE 277
            +   D VS  +W   +G       +++  ++ AL FI+ D +S +C+L     F  +  
Sbjct: 253 YVEAQDGVSVKEWMRKQGIPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKH 312

Query: 278 ASLLRMLKGSPDVYLSGPIRKYITDRGGRFHLRWGCREILYDESADGSTYVKGLSMSKAT 337
            S +  L G+P   L  PI  +I   GG  HL    + I   E  D +T VK   +   T
Sbjct: 313 GSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLNSRIKNI---ELNDDNT-VKSFLL---T 365

Query: 338 AKQIVKADAYVAACDVPGIKRLIPSEWRENEFFNNIYELVGVPVVTVQL 386
             ++++ DAYV+A  V  +K L+P  W+   +F  + +LVGVPV+ V +
Sbjct: 366 NGKVIEGDAYVSAAPVDILKLLLPENWKGVPYFQRLDKLVGVPVINVHI 414


>Medtr3g084850.1 | phytoene dehydrogenase/chromoplastic protein | HC
           | chr3:38328561-38330078 | 20130731
          Length = 142

 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 7/128 (5%)

Query: 433 EDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPS-----SQGLEVTWSSV 487
           ++YY   Q S+L+ V  P + ++   +E+II     ++  LFP          ++    V
Sbjct: 6   KEYYNPNQ-SMLELVFAPAEEWISRSDEDIIGATMSELAKLFPDEISADQSKAKIIKYHV 64

Query: 488 VKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASACICDA 547
           VK  +S+Y+  P  +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+  +  I   
Sbjct: 65  VKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ- 123

Query: 548 GEELLTLR 555
             ELL  R
Sbjct: 124 DSELLAAR 131


>Medtr3g084850.2 | phytoene dehydrogenase/chromoplastic protein | HC
           | chr3:38328311-38330236 | 20130731
          Length = 141

 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 6/117 (5%)

Query: 433 EDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFPS-----SQGLEVTWSSV 487
           ++YY   Q S+L+ V  P + ++   +E+II     ++  LFP          ++    V
Sbjct: 6   KEYYNPNQ-SMLELVFAPAEEWISRSDEDIIGATMSELAKLFPDEISADQSKAKIIKYHV 64

Query: 488 VKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASACI 544
           VK  +S+Y+  P  +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+  +  I
Sbjct: 65  VKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 121