Miyakogusa Predicted Gene

Lj5g3v1414150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1414150.1 Non Characterized Hit- tr|A9NW78|A9NW78_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,35.9,4e-19,seg,NULL,CUFF.55222.1
         (209 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g080990.2 | MtN26 | HC | chr1:36062765-36060795 | 20130731      307   5e-84
Medtr1g080990.3 | MtN26 | HC | chr1:36062765-36060795 | 20130731      252   2e-67
Medtr1g080990.1 | MtN26 | HC | chr1:36062677-36061070 | 20130731      209   1e-54
Medtr7g114890.1 | hypothetical protein | HC | chr7:47432969-4743...   164   5e-41
Medtr7g114890.3 | hypothetical protein | HC | chr7:47432969-4743...   164   7e-41
Medtr1g041410.1 | neurogenic locus notch-like protein | HC | chr...   155   3e-38
Medtr7g114890.4 | hypothetical protein | HC | chr7:47432969-4743...   141   6e-34
Medtr7g114890.2 | hypothetical protein | HC | chr7:47432969-4743...   141   6e-34
Medtr7g114880.1 | MtN26 | HC | chr7:47430305-47430732 | 20130731       59   3e-09

>Medtr1g080990.2 | MtN26 | HC | chr1:36062765-36060795 | 20130731
          Length = 203

 Score =  307 bits (786), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 147/209 (70%), Positives = 167/209 (79%), Gaps = 6/209 (2%)

Query: 1   MGSSRXXXXXXXXXXXXXPMAAKGDIVDDILDKVCEEVECGKGKCVVNTTYPLNFICECE 60
           MGS +             PMAAKGD  DD+L+KVCEEVECGKG CVVN++YPLNF+CEC+
Sbjct: 1   MGSFKLLSLIAMVLMLLLPMAAKGDFFDDVLEKVCEEVECGKGNCVVNSSYPLNFVCECD 60

Query: 61  SGWKRTRDEDSDKYGTSFLPCVIPQCSLNYGCQPAPPPVPEKSLPHNLSAFDPCYWAYCG 120
           SGWKRT+DED D Y TSFLPCVIPQCSLNYGCQPAPPPVPEK+LP N+SAFDPCYWAYCG
Sbjct: 61  SGWKRTQDEDDDIYATSFLPCVIPQCSLNYGCQPAPPPVPEKTLPRNISAFDPCYWAYCG 120

Query: 121 EGKCITNRTYTYGCECSPNFYNLLNISVFPCYSECTLGSDCSRLGIKVANXXXXXXXXXX 180
           EG+C  N+T+T+ CEC+PN+YNLLNISVFPCYSECTLGSDCSRLGIKV+N          
Sbjct: 121 EGQCTKNKTHTHRCECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVSNSTGDVDSH-- 178

Query: 181 XXLASSILPGGSFQWMVMLLMSTGMVMWS 209
              ASSI  GG F W+ +LL+STGMVMWS
Sbjct: 179 ---ASSIF-GGRFHWITVLLISTGMVMWS 203


>Medtr1g080990.3 | MtN26 | HC | chr1:36062765-36060795 | 20130731
          Length = 158

 Score =  252 bits (643), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 115/155 (74%), Positives = 131/155 (84%)

Query: 1   MGSSRXXXXXXXXXXXXXPMAAKGDIVDDILDKVCEEVECGKGKCVVNTTYPLNFICECE 60
           MGS +             PMAAKGD  DD+L+KVCEEVECGKG CVVN++YPLNF+CEC+
Sbjct: 1   MGSFKLLSLIAMVLMLLLPMAAKGDFFDDVLEKVCEEVECGKGNCVVNSSYPLNFVCECD 60

Query: 61  SGWKRTRDEDSDKYGTSFLPCVIPQCSLNYGCQPAPPPVPEKSLPHNLSAFDPCYWAYCG 120
           SGWKRT+DED D Y TSFLPCVIPQCSLNYGCQPAPPPVPEK+LP N+SAFDPCYWAYCG
Sbjct: 61  SGWKRTQDEDDDIYATSFLPCVIPQCSLNYGCQPAPPPVPEKTLPRNISAFDPCYWAYCG 120

Query: 121 EGKCITNRTYTYGCECSPNFYNLLNISVFPCYSEC 155
           EG+C  N+T+T+ CEC+PN+YNLLNISVFPCYSEC
Sbjct: 121 EGQCTKNKTHTHRCECNPNYYNLLNISVFPCYSEC 155


>Medtr1g080990.1 | MtN26 | HC | chr1:36062677-36061070 | 20130731
          Length = 161

 Score =  209 bits (533), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 113/209 (54%), Positives = 127/209 (60%), Gaps = 48/209 (22%)

Query: 1   MGSSRXXXXXXXXXXXXXPMAAKGDIVDDILDKVCEEVECGKGKCVVNTTYPLNFICECE 60
           MGS +             PMAAKGD  DD+L+KVCEEVECGKG CVVN++YPLNF+CEC+
Sbjct: 1   MGSFKLLSLIAMVLMLLLPMAAKGDFFDDVLEKVCEEVECGKGNCVVNSSYPLNFVCECD 60

Query: 61  SGWKRTRDEDSDKYGTSFLPCVIPQCSLNYGCQPAPPPVPEKSLPHNLSAFDPCYWAYCG 120
           SGWKRT+DED D Y TSFLPCVIPQCSLNYGCQPAPPPVPEK+LP N+SAFD        
Sbjct: 61  SGWKRTQDEDDDIYATSFLPCVIPQCSLNYGCQPAPPPVPEKTLPRNISAFDR------- 113

Query: 121 EGKCITNRTYTYGCECSPNFYNLLNISVFPCYSECTLGSDCSRLGIKVANXXXXXXXXXX 180
                                              TLGSDCSRLGIKV+N          
Sbjct: 114 -----------------------------------TLGSDCSRLGIKVSNSTGDVDSH-- 136

Query: 181 XXLASSILPGGSFQWMVMLLMSTGMVMWS 209
              ASSI  GG F W+ +LL+STGMVMWS
Sbjct: 137 ---ASSIF-GGRFHWITVLLISTGMVMWS 161


>Medtr7g114890.1 | hypothetical protein | HC |
           chr7:47432969-47434350 | 20130731
          Length = 204

 Score =  164 bits (416), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 85/160 (53%), Positives = 107/160 (66%), Gaps = 13/160 (8%)

Query: 22  AKGDIVDDILDKVCEEVECGKGKCVVNTTY--PLNFICECESGWKRTRDEDSDKYGTSF- 78
           AKG       DK+C EVECGKGKC   +T+  P +  CECE GW++ +  D D Y   F 
Sbjct: 24  AKGSFFHRYRDKICREVECGKGKCGATSTHKNPFSVFCECEPGWQQIK-VDPD-YSNKFP 81

Query: 79  -LPCVIPQCSLNYGCQPAPPPVPEK--SLPHNLSAFDPCYWAYCGEGKCITN-----RTY 130
            LPCVIP+C++N  C+ A P VPEK   +PHN+S  DPCY A+CGEG CI N       Y
Sbjct: 82  PLPCVIPECTINDDCKQALPLVPEKDFQIPHNMSHSDPCYLAFCGEGTCIKNSKKQKHNY 141

Query: 131 TYGCECSPNFYNLLNISVFPCYSECTLGSDCSRLGIKVAN 170
            Y CEC PN++NLLN+S  PCY++C+LGSDCS+LGIK+ N
Sbjct: 142 KYRCECKPNYFNLLNMSGLPCYNKCSLGSDCSKLGIKIVN 181


>Medtr7g114890.3 | hypothetical protein | HC |
           chr7:47432969-47434033 | 20130731
          Length = 199

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 85/162 (52%), Positives = 108/162 (66%), Gaps = 13/162 (8%)

Query: 20  MAAKGDIVDDILDKVCEEVECGKGKCVVNTTY--PLNFICECESGWKRTRDEDSDKYGTS 77
           + AKG       DK+C EVECGKGKC   +T+  P +  CECE GW++ +  D D Y   
Sbjct: 22  VNAKGSFFHRYRDKICREVECGKGKCGATSTHKNPFSVFCECEPGWQQIK-VDPD-YSNK 79

Query: 78  F--LPCVIPQCSLNYGCQPAPPPVPEK--SLPHNLSAFDPCYWAYCGEGKCITN-----R 128
           F  LPCVIP+C++N  C+ A P VPEK   +PHN+S  DPCY A+CGEG CI N      
Sbjct: 80  FPPLPCVIPECTINDDCKQALPLVPEKDFQIPHNMSHSDPCYLAFCGEGTCIKNSKKQKH 139

Query: 129 TYTYGCECSPNFYNLLNISVFPCYSECTLGSDCSRLGIKVAN 170
            Y Y CEC PN++NLLN+S  PCY++C+LGSDCS+LGIK+ N
Sbjct: 140 NYKYRCECKPNYFNLLNMSGLPCYNKCSLGSDCSKLGIKIVN 181


>Medtr1g041410.1 | neurogenic locus notch-like protein | HC |
           chr1:15490155-15486147 | 20130731
          Length = 214

 Score =  155 bits (391), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 115/200 (57%), Gaps = 15/200 (7%)

Query: 19  PMAAKGD----IVDDILDKVCEEVECGKGKC--VVNTTYPLNFICECESGWKRTRDEDSD 72
           P++ K D    ++  I + VC+EVECGKG C    N+T+P  F CEC+ GWK+  D   D
Sbjct: 17  PLSTKSDFLSPLLSPIFEDVCKEVECGKGTCKPSKNSTFP--FECECDHGWKKALDSIDD 74

Query: 73  KYGTSFLPCVIPQCSLNYGCQPAPPPVPEKSLPHNLSAFDPCYWAYCGEGKCITNRTYTY 132
           + G  FLPC+IP C+L+Y C  AP P PEK+   N S FD C+W  CG G C    T+ Y
Sbjct: 75  E-GLKFLPCIIPNCTLDYSCSKAPAPAPEKAKKSNESIFDACHWVDCGGGSCKKTSTFNY 133

Query: 133 GCECSPNFYNLLNISVFPCYSECTLGSDCSRLGIKVANXXXXXX-----XXXXXXLASSI 187
            CEC  ++YNLLNI+ FPC+ EC++G  CS LGI ++N                  A SI
Sbjct: 134 SCECDTSYYNLLNITTFPCFRECSIGMGCSDLGISMSNSSSSSAPPPVLNENSKNEAISI 193

Query: 188 LPGGSFQWMVMLLMSTGMVM 207
           L G S  W+V+++M    + 
Sbjct: 194 LQGRSL-WLVLVIMVMAKIQ 212


>Medtr7g114890.4 | hypothetical protein | HC |
           chr7:47432969-47433858 | 20130731
          Length = 174

 Score =  141 bits (355), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/146 (51%), Positives = 94/146 (64%), Gaps = 13/146 (8%)

Query: 22  AKGDIVDDILDKVCEEVECGKGKCVVNTTY--PLNFICECESGWKRTRDEDSDKYGTSF- 78
           AKG       DK+C EVECGKGKC   +T+  P +  CECE GW++ +  D D Y   F 
Sbjct: 24  AKGSFFHRYRDKICREVECGKGKCGATSTHKNPFSVFCECEPGWQQIK-VDPD-YSNKFP 81

Query: 79  -LPCVIPQCSLNYGCQPAPPPVPEK--SLPHNLSAFDPCYWAYCGEGKCITN-----RTY 130
            LPCVIP+C++N  C+ A P VPEK   +PHN+S  DPCY A+CGEG CI N       Y
Sbjct: 82  PLPCVIPECTINDDCKQALPLVPEKDFQIPHNMSHSDPCYLAFCGEGTCIKNSKKQKHNY 141

Query: 131 TYGCECSPNFYNLLNISVFPCYSECT 156
            Y CEC PN++NLLN+S  PCY++CT
Sbjct: 142 KYRCECKPNYFNLLNMSGLPCYNKCT 167


>Medtr7g114890.2 | hypothetical protein | HC |
           chr7:47432969-47433858 | 20130731
          Length = 174

 Score =  141 bits (355), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/146 (51%), Positives = 94/146 (64%), Gaps = 13/146 (8%)

Query: 22  AKGDIVDDILDKVCEEVECGKGKCVVNTTY--PLNFICECESGWKRTRDEDSDKYGTSF- 78
           AKG       DK+C EVECGKGKC   +T+  P +  CECE GW++ +  D D Y   F 
Sbjct: 24  AKGSFFHRYRDKICREVECGKGKCGATSTHKNPFSVFCECEPGWQQIK-VDPD-YSNKFP 81

Query: 79  -LPCVIPQCSLNYGCQPAPPPVPEK--SLPHNLSAFDPCYWAYCGEGKCITN-----RTY 130
            LPCVIP+C++N  C+ A P VPEK   +PHN+S  DPCY A+CGEG CI N       Y
Sbjct: 82  PLPCVIPECTINDDCKQALPLVPEKDFQIPHNMSHSDPCYLAFCGEGTCIKNSKKQKHNY 141

Query: 131 TYGCECSPNFYNLLNISVFPCYSECT 156
            Y CEC PN++NLLN+S  PCY++CT
Sbjct: 142 KYRCECKPNYFNLLNMSGLPCYNKCT 167


>Medtr7g114880.1 | MtN26 | HC | chr7:47430305-47430732 | 20130731
          Length = 109

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 1  MGSSRXXXXXXXXXXXXXPMAAKGDIVDDILDKVCE-EVECGKGKCVV--NTTYPLNFIC 57
          MGS++              + A+G + D + DK C+  V+CGKGKCVV  N  +P  F+C
Sbjct: 1  MGSNKFLVSLVVVSILLLHLTAEGSLFDYLKDKACKMAVDCGKGKCVVRSNHKHPFKFVC 60

Query: 58 ECESGWKRTRDEDSDKYGTSFLP--CVIPQ 85
          +CE GWK+ +          FLP  CVIP+
Sbjct: 61 KCEPGWKQIKAGPKH----MFLPKACVIPE 86