Miyakogusa Predicted Gene

Lj5g3v1414130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1414130.1 tr|I0YMG8|I0YMG8_9CHLO DUF1000-domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,66.15,4e-18,THIOREDOXIN - RELATED,NULL;
THIOREDOXIN-RELATED,Thioredoxin; Galactose-binding
domain-like,Galactose,CUFF.55221.1
         (80 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g080960.1 | PITH domain plant protein | HC | chr1:36042153...   141   1e-34

>Medtr1g080960.1 | PITH domain plant protein | HC |
          chr1:36042153-36038768 | 20130731
          Length = 177

 Score =  141 bits (355), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 73/81 (90%), Gaps = 1/81 (1%)

Query: 1  MSGESAS-AIQKGQVDLLDFIDWSSVECLNQSSTHSLPNAIKQGYREDDGLHLESDADEQ 59
          MSGESA+ A+ KGQVDLLDFIDW+ VECLNQ + +SLPNAIKQGYREDDGLHLESDADEQ
Sbjct: 1  MSGESATTAVHKGQVDLLDFIDWTGVECLNQKTNNSLPNAIKQGYREDDGLHLESDADEQ 60

Query: 60 LLLYIPFTQVIKLSAILIKGP 80
          LLLYIPFTQVIKL ++  KGP
Sbjct: 61 LLLYIPFTQVIKLYSVAFKGP 81