Miyakogusa Predicted Gene

Lj5g3v1412970.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1412970.2 Non Characterized Hit- tr|C0JP10|C0JP10_LOTJA
Putative basic helix-loop-helix protein BHLH2
OS=Lotus,99.12,0,HLH,Helix-loop-helix domain; seg,NULL; no
description,Helix-loop-helix domain; HLH,
helix-loop-helix,CUFF.55257.2
         (342 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g080890.1 | transcription factor UNE12-like protein | HC |...   310   2e-84
Medtr1g070870.1 | basic helix loop helix protein BHLH4 | HC | ch...   216   3e-56
Medtr1g070870.2 | basic helix loop helix protein BHLH4 | HC | ch...   215   4e-56
Medtr4g131160.1 | BHLH transcription factor | HC | chr4:54719229...   135   8e-32
Medtr4g131160.2 | BHLH transcription factor | HC | chr4:54719229...   135   8e-32
Medtr3g498825.1 | transcription factor bHLH137 | HC | chr3:45174...    60   4e-09
Medtr3g116770.2 | BHLH transcription factor | HC | chr3:54614928...    60   4e-09
Medtr3g116770.1 | BHLH transcription factor | HC | chr3:54614928...    60   4e-09
Medtr7g053410.1 | BHLH transcription factor | HC | chr7:18808902...    60   4e-09
Medtr7g053410.2 | BHLH transcription factor | HC | chr7:18808900...    60   4e-09
Medtr4g070320.1 | transcription factor | HC | chr4:26483456-2648...    60   4e-09
Medtr8g012290.1 | BHLH transcription factor | HC | chr8:3449775-...    60   4e-09
Medtr8g012290.2 | BHLH transcription factor | HC | chr8:3449797-...    60   4e-09
Medtr1g017350.3 | transcription factor | HC | chr1:4807563-48009...    59   6e-09
Medtr1g017350.1 | transcription factor | HC | chr1:4805633-48009...    59   6e-09
Medtr1g017350.2 | transcription factor | HC | chr1:4805633-48009...    59   6e-09
Medtr1g017350.5 | transcription factor | HC | chr1:4805633-48009...    59   6e-09
Medtr1g017350.4 | transcription factor | HC | chr1:4805633-48009...    59   6e-09
Medtr8g065740.1 | transcription factor | HC | chr8:27327298-2733...    57   2e-08
Medtr5g048860.7 | BHLH transcription factor | HC | chr5:21359767...    56   4e-08
Medtr5g048860.6 | BHLH transcription factor | HC | chr5:21359767...    56   4e-08
Medtr5g048860.5 | BHLH transcription factor | HC | chr5:21359767...    56   4e-08
Medtr5g048860.1 | BHLH transcription factor | HC | chr5:21359821...    56   4e-08
Medtr5g048860.3 | BHLH transcription factor | HC | chr5:21360103...    56   4e-08
Medtr5g048860.10 | BHLH transcription factor | HC | chr5:2136019...    56   4e-08
Medtr5g048860.4 | BHLH transcription factor | HC | chr5:21360103...    56   4e-08
Medtr5g048860.8 | BHLH transcription factor | HC | chr5:21359821...    56   4e-08
Medtr5g048860.9 | BHLH transcription factor | HC | chr5:21360103...    56   4e-08
Medtr5g048860.2 | BHLH transcription factor | HC | chr5:21360103...    56   4e-08
Medtr5g037250.1 | transcription factor | HC | chr5:16271354-1626...    56   6e-08
Medtr8g062240.1 | transcription factor | HC | chr8:26004535-2600...    56   6e-08
Medtr1g072530.1 | helix loop helix DNA-binding domain protein | ...    54   2e-07
Medtr1g069155.1 | transcription factor | HC | chr1:29736862-2972...    54   2e-07
Medtr1g018090.1 | helix loop helix DNA-binding domain protein | ...    54   2e-07
Medtr5g005110.1 | transcription factor | HC | chr5:277903-279787...    54   3e-07
Medtr8g099880.1 | basic helix loop helix protein BHLH8 | HC | ch...    53   5e-07
Medtr3g103030.1 | transcription factor | HC | chr3:47454820-4745...    53   5e-07
Medtr7g099540.2 | transcription factor | HC | chr7:39933891-3993...    53   5e-07
Medtr1g059270.2 | transcription factor | HC | chr1:21508218-2151...    52   6e-07
Medtr1g059270.1 | transcription factor | HC | chr1:21508003-2151...    52   6e-07
Medtr7g092510.1 | transcription factor | HC | chr7:36672741-3666...    52   6e-07
Medtr7g111320.1 | phytochrome-interacting factor 3.1 | HC | chr7...    52   7e-07
Medtr7g110810.1 | helix loop helix DNA-binding domain protein | ...    52   1e-06
Medtr1g084980.1 | phytochrome-interacting factor 3.1 | HC | chr1...    51   2e-06

>Medtr1g080890.1 | transcription factor UNE12-like protein | HC |
           chr1:36000358-35993128 | 20130731
          Length = 355

 Score =  310 bits (793), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 184/353 (52%), Positives = 201/353 (56%), Gaps = 14/353 (3%)

Query: 2   VSEGLGDDFLEQILAVPE---AYGRTV-VXXXXXXXXXXXXXXXXXXXXXXXEQS--AFL 55
            SEGLGDDF EQILAVPE    YG  + +                       EQ+   FL
Sbjct: 5   CSEGLGDDFFEQILAVPENGVGYGGVLQLGSTPHGGSLRGGGGGIMPLGLNLEQNHHGFL 64

Query: 56  THHQD-TRFIDXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXENYATXXXXXXITDRE 109
             HQD TRF+D                                    ++      ITDR+
Sbjct: 65  RQHQDGTRFVDNVVDVEGNITNNNNNNHHHLRLHDINNHNNNNNITSSSPSSTPGITDRD 124

Query: 110 SMQMRGLFPTFGQLHTPTHAPSVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASNAH 169
           SMQMRGLF TFGQLHTPTHA  VR                               AS   
Sbjct: 125 SMQMRGLFSTFGQLHTPTHAQPVRPMLQSPPPQPQLHLHHQHQQHFQSQQPNP--ASVTA 182

Query: 170 MQHPPGIRPRVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIV 229
           M  PPGIRPRVRARRGQATDPHS                 QELVPSINK+D+AAMLDEIV
Sbjct: 183 MPQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDKAAMLDEIV 242

Query: 230 DYVKFLRLQVKVLSMSRXXXXXXXXXXXXDVPLSAVEGEDIEGGASEQAWSKWSNDGTEQ 289
           DYVKFLRLQVKVLSMSR            DVP+SAVEGEDIEGG ++QAW+KWSNDGTEQ
Sbjct: 243 DYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPVSAVEGEDIEGGTNQQAWAKWSNDGTEQ 302

Query: 290 QVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSEASTTIKPESDSQT 342
           QVAKLMEEDVGAAMQ LQSKALCIMPISLASAIFRMPQS++ST IKPES++ T
Sbjct: 303 QVAKLMEEDVGAAMQLLQSKALCIMPISLASAIFRMPQSDSSTIIKPESNNHT 355


>Medtr1g070870.1 | basic helix loop helix protein BHLH4 | HC |
           chr1:31384531-31380237 | 20130731
          Length = 282

 Score =  216 bits (549), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 108/167 (64%), Positives = 124/167 (74%)

Query: 172 HPPGIRPRVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDY 231
            PP +RPRVRARRGQATDPHS                 QELVPS+NK+DRAAMLDEIVDY
Sbjct: 112 QPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDY 171

Query: 232 VKFLRLQVKVLSMSRXXXXXXXXXXXXDVPLSAVEGEDIEGGASEQAWSKWSNDGTEQQV 291
           VKFLRLQVKVLSMSR            D+PLS+VE E  + G ++ AW KWSNDGTE+QV
Sbjct: 172 VKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSDSGRNQPAWEKWSNDGTEKQV 231

Query: 292 AKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSEASTTIKPES 338
           AKLMEE+VGAAMQFLQSKALCIMPISLASAI++   S+ S+ +KPE+
Sbjct: 232 AKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDNSSIVKPET 278


>Medtr1g070870.2 | basic helix loop helix protein BHLH4 | HC |
           chr1:31384448-31380418 | 20130731
          Length = 285

 Score =  215 bits (548), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 108/167 (64%), Positives = 124/167 (74%)

Query: 172 HPPGIRPRVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDY 231
            PP +RPRVRARRGQATDPHS                 QELVPS+NK+DRAAMLDEIVDY
Sbjct: 115 QPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDY 174

Query: 232 VKFLRLQVKVLSMSRXXXXXXXXXXXXDVPLSAVEGEDIEGGASEQAWSKWSNDGTEQQV 291
           VKFLRLQVKVLSMSR            D+PLS+VE E  + G ++ AW KWSNDGTE+QV
Sbjct: 175 VKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSDSGRNQPAWEKWSNDGTEKQV 234

Query: 292 AKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSEASTTIKPES 338
           AKLMEE+VGAAMQFLQSKALCIMPISLASAI++   S+ S+ +KPE+
Sbjct: 235 AKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDNSSIVKPET 281


>Medtr4g131160.1 | BHLH transcription factor | HC |
           chr4:54719229-54715702 | 20130731
          Length = 400

 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/154 (49%), Positives = 93/154 (60%), Gaps = 8/154 (5%)

Query: 177 RPRVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDYVKFLR 236
           R +VRARRGQATDPHS                 QELVP+ NK+D+A+MLDEI+DYVKFL+
Sbjct: 193 RQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 252

Query: 237 LQVKVLSMSRXXXXXXXXXXXXDVPLSAVEG---EDIEGGASEQAWSKWSNDG-----TE 288
           +QVKVLSMSR            D+    V      +  GG   +     S+       TE
Sbjct: 253 VQVKVLSMSRLGGAGAVAPLVADMSSEGVSDCVQTNGNGGVHPRNPKTASSSNESLTMTE 312

Query: 289 QQVAKLMEEDVGAAMQFLQSKALCIMPISLASAI 322
            QVAKLMEED+G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 313 HQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 346


>Medtr4g131160.2 | BHLH transcription factor | HC |
           chr4:54719229-54715448 | 20130731
          Length = 403

 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/154 (49%), Positives = 93/154 (60%), Gaps = 8/154 (5%)

Query: 177 RPRVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDYVKFLR 236
           R +VRARRGQATDPHS                 QELVP+ NK+D+A+MLDEI+DYVKFL+
Sbjct: 196 RQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 255

Query: 237 LQVKVLSMSRXXXXXXXXXXXXDVPLSAVEG---EDIEGGASEQAWSKWSNDG-----TE 288
           +QVKVLSMSR            D+    V      +  GG   +     S+       TE
Sbjct: 256 VQVKVLSMSRLGGAGAVAPLVADMSSEGVSDCVQTNGNGGVHPRNPKTASSSNESLTMTE 315

Query: 289 QQVAKLMEEDVGAAMQFLQSKALCIMPISLASAI 322
            QVAKLMEED+G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 316 HQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 349


>Medtr3g498825.1 | transcription factor bHLH137 | HC |
           chr3:45174959-45177533 | 20130731
          Length = 330

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 1/122 (0%)

Query: 170 MQHPPGIRPRVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEI 228
           +  PP     VRARRGQATD HS                 Q+LVP  +K + +A MLDEI
Sbjct: 137 LDEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKKLQQLVPGCDKVTGKALMLDEI 196

Query: 229 VDYVKFLRLQVKVLSMSRXXXXXXXXXXXXDVPLSAVEGEDIEGGASEQAWSKWSNDGTE 288
           ++YV+ L+ QV+ LSM              D+    V  E +   AS    S  S+  + 
Sbjct: 197 INYVQSLQNQVEFLSMKLTSVNPMFYDMATDLDTLLVRQEKLNNLASPSTLSSVSHCNSP 256

Query: 289 QQ 290
           +Q
Sbjct: 257 KQ 258


>Medtr3g116770.2 | BHLH transcription factor | HC |
           chr3:54614928-54618493 | 20130731
          Length = 398

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 191 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQ 250

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 251 VEFLSM 256


>Medtr3g116770.1 | BHLH transcription factor | HC |
           chr3:54614928-54618490 | 20130731
          Length = 397

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 191 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQ 250

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 251 VEFLSM 256


>Medtr7g053410.1 | BHLH transcription factor | HC |
           chr7:18808902-18812670 | 20130731
          Length = 517

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 317 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 376

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 377 VEFLSM 382


>Medtr7g053410.2 | BHLH transcription factor | HC |
           chr7:18808900-18812617 | 20130731
          Length = 535

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 317 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 376

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 377 VEFLSM 382


>Medtr4g070320.1 | transcription factor | HC |
           chr4:26483456-26485783 | 20130731
          Length = 344

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 143 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 202

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 203 VEFLSM 208


>Medtr8g012290.1 | BHLH transcription factor | HC |
           chr8:3449775-3453461 | 20130731
          Length = 497

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 291 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 350

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 351 VEFLSM 356


>Medtr8g012290.2 | BHLH transcription factor | HC |
           chr8:3449797-3453478 | 20130731
          Length = 498

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 291 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 350

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 351 VEFLSM 356


>Medtr1g017350.3 | transcription factor | HC | chr1:4807563-4800948
           | 20130731
          Length = 421

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 319

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 320 VEFLSM 325


>Medtr1g017350.1 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 426

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 319

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 320 VEFLSM 325


>Medtr1g017350.2 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 421

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 319

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 320 VEFLSM 325


>Medtr1g017350.5 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 418

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 319

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 320 VEFLSM 325


>Medtr1g017350.4 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 423

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 319

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 320 VEFLSM 325


>Medtr8g065740.1 | transcription factor | HC |
           chr8:27327298-27331635 | 20130731
          Length = 467

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 Q+LVP  NK + +A MLDEI++YV+ L+ Q
Sbjct: 305 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQ 364

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 365 VEFLSM 370


>Medtr5g048860.7 | BHLH transcription factor | HC |
           chr5:21359767-21356247 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.6 | BHLH transcription factor | HC |
           chr5:21359767-21356205 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.5 | BHLH transcription factor | HC |
           chr5:21359767-21356205 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.1 | BHLH transcription factor | HC |
           chr5:21359821-21356205 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.3 | BHLH transcription factor | HC |
           chr5:21360103-21356247 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.10 | BHLH transcription factor | HC |
           chr5:21360190-21356205 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.4 | BHLH transcription factor | HC |
           chr5:21360103-21356205 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.8 | BHLH transcription factor | HC |
           chr5:21359821-21356247 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.9 | BHLH transcription factor | HC |
           chr5:21360103-21356205 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g048860.2 | BHLH transcription factor | HC |
           chr5:21360103-21356247 | 20130731
          Length = 558

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQAT+ HS                 QELVP  +K + +A MLDEI++YV+ L+ Q
Sbjct: 365 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 424

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 425 VEFLSM 430


>Medtr5g037250.1 | transcription factor | HC |
           chr5:16271354-16268287 | 20130731
          Length = 239

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 172 HPPGIRPRVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKS-DRAAMLDEIVD 230
           HP      VRARRGQATD HS                 Q+LVP  NK   +A +LDEI++
Sbjct: 104 HPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIIN 163

Query: 231 YVKFLRLQVKVLSM 244
           Y++ L  QV+ LSM
Sbjct: 164 YIQSLHHQVEFLSM 177


>Medtr8g062240.1 | transcription factor | HC |
           chr8:26004535-26001034 | 20130731
          Length = 278

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKS-DRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  NK   +A +LDEI++Y++ L+ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 211 VEFLSM 216


>Medtr1g072530.1 | helix loop helix DNA-binding domain protein | HC
           | chr1:32181215-32184171 | 20130731
          Length = 325

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 12/113 (10%)

Query: 210 QELVPSINKSDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXXXXXDVPLSAVEGED 269
            EL+P+ +   +A +LD+I+DYVK+L++QVK LS S+             +PL   EG  
Sbjct: 214 HELLPTPHVGSQAYILDDIIDYVKYLQIQVKELSGSKLQADSNS------IPLVFHEG-- 265

Query: 270 IEGGASEQAWSKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAI 322
                 EQ      N+  E+ +  L+E +  A  Q L++K L ++PI+L   +
Sbjct: 266 YGHYIKEQVL----NEPLEEIMGNLLEVNSAATCQLLENKGLVLLPIALVDEL 314


>Medtr1g069155.1 | transcription factor | HC |
           chr1:29736862-29728341 | 20130731
          Length = 534

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 39/63 (61%)

Query: 182 ARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDYVKFLRLQVKV 241
           A+R +A + H+                 QEL+P  NKSD+A+MLDE ++Y+K L+LQV++
Sbjct: 319 AKRSRAAEVHNLSERKRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 378

Query: 242 LSM 244
           +SM
Sbjct: 379 MSM 381


>Medtr1g018090.1 | helix loop helix DNA-binding domain protein | LC
           | chr1:5273706-5271864 | 20130731
          Length = 366

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 36/65 (55%)

Query: 179 RVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDYVKFLRLQ 238
           + RA RG ATDP S                 Q LVP+  K D + ML+E V+YVKFL+ Q
Sbjct: 273 KTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQ 332

Query: 239 VKVLS 243
           +K+LS
Sbjct: 333 IKLLS 337


>Medtr5g005110.1 | transcription factor | HC | chr5:277903-279787 |
           20130731
          Length = 331

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 36/65 (55%)

Query: 179 RVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDYVKFLRLQ 238
           + R+ RG ATDP S                 Q LVP+  K D + ML+E V YVKFL+LQ
Sbjct: 223 KSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 282

Query: 239 VKVLS 243
           +K+LS
Sbjct: 283 IKLLS 287


>Medtr8g099880.1 | basic helix loop helix protein BHLH8 | HC |
           chr8:40310788-40313947 | 20130731
          Length = 327

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VRARRGQATD HS                 Q+LVP  ++ + +A +LDEI++YV+ L+ Q
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQ 204

Query: 239 VKVLSM 244
           V+ LSM
Sbjct: 205 VEFLSM 210


>Medtr3g103030.1 | transcription factor | HC |
           chr3:47454820-47457040 | 20130731
          Length = 321

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 36/65 (55%)

Query: 179 RVRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDYVKFLRLQ 238
           + RA RG ATDP S                 Q LVP+  K D + ML++ + YVKFL+LQ
Sbjct: 228 KKRASRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIQYVKFLQLQ 287

Query: 239 VKVLS 243
           +K+LS
Sbjct: 288 IKLLS 292


>Medtr7g099540.2 | transcription factor | HC |
           chr7:39933891-39938353 | 20130731
          Length = 461

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 183 RRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDYVKFLRLQVKVL 242
           +R +A + H+                 QEL+P  NKSD+A+MLDE +DY+K L+LQV+++
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMM 314

Query: 243 SM 244
           SM
Sbjct: 315 SM 316


>Medtr1g059270.2 | transcription factor | HC |
           chr1:21508218-21513937 | 20130731
          Length = 252

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VR RRGQATD HS                 QELVP  NK S  A +LD+I+++V+ L+ +
Sbjct: 160 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHE 219

Query: 239 VKVLSM 244
           V++LSM
Sbjct: 220 VEILSM 225


>Medtr1g059270.1 | transcription factor | HC |
           chr1:21508003-21513939 | 20130731
          Length = 326

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VR RRGQATD HS                 QELVP  NK S  A +LD+I+++V+ L+ +
Sbjct: 160 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHE 219

Query: 239 VKVLSM 244
           V++LSM
Sbjct: 220 VEILSM 225


>Medtr7g092510.1 | transcription factor | HC |
           chr7:36672741-36665752 | 20130731
          Length = 340

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 180 VRARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
           VR RRGQATD HS                 QELVP   K S  A +LDEI+++V+ L+ Q
Sbjct: 173 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQ 232

Query: 239 VKVLSM 244
           V++LSM
Sbjct: 233 VEILSM 238


>Medtr7g111320.1 | phytochrome-interacting factor 3.1 | HC |
           chr7:45695946-45691940 | 20130731
          Length = 691

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 41/63 (65%)

Query: 182 ARRGQATDPHSXXXXXXXXXXXXXXXXXQELVPSINKSDRAAMLDEIVDYVKFLRLQVKV 241
           +++ ++T+ H+                 QEL+P+ NK+D+A+MLDE ++Y+K L+LQ+++
Sbjct: 434 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQLQI 493

Query: 242 LSM 244
           +SM
Sbjct: 494 MSM 496


>Medtr7g110810.1 | helix loop helix DNA-binding domain protein | HC
           | chr7:45421992-45424245 | 20130731
          Length = 373

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 32/37 (86%)

Query: 210 QELVPSINKSDRAAMLDEIVDYVKFLRLQVKVLSMSR 246
           +EL+P+ NK D+A+MLD+ +DY+K L+LQ++++SM R
Sbjct: 232 KELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMGR 268


>Medtr1g084980.1 | phytochrome-interacting factor 3.1 | HC |
           chr1:37932621-37937084 | 20130731
          Length = 721

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 31/35 (88%)

Query: 210 QELVPSINKSDRAAMLDEIVDYVKFLRLQVKVLSM 244
           QEL+P+ NK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 492 QELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSM 526