Miyakogusa Predicted Gene
- Lj5g3v1381550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1381550.1 Non Characterized Hit- tr|I1Q5S8|I1Q5S8_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.1,8e-19,TPX2,Xklp2 targeting protein; coiled-coil,NULL;
seg,NULL,CUFF.55219.1
(262 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g080690.1 | TPX2 (targeting protein for Xklp2) family prot... 310 1e-84
Medtr7g115310.1 | FAD/NAD(P)-binding oxidoreductase family prote... 169 2e-42
Medtr1g075310.1 | TPX2 (targeting protein for Xklp2) family prot... 80 3e-15
Medtr1g075310.2 | TPX2 (targeting protein for Xklp2) family prot... 80 3e-15
>Medtr1g080690.1 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:35884532-35888074 | 20130731
Length = 369
Score = 310 bits (794), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 186/263 (70%), Gaps = 13/263 (4%)
Query: 1 MGREVSETQVVDKKPNGVIAASNGDSNDKAHISSKIAAVKAEAKDHEVKECTKDNDFVEK 60
MGR+V+E QV D+KPNGV A NG ND H++SKIAAVK EA+DHEVKECT+ N FVEK
Sbjct: 1 MGRQVTEMQVEDQKPNGVAIALNGSPNDNGHVTSKIAAVKLEAEDHEVKECTEVNVFVEK 60
Query: 61 CHEKKDVLSAKTTNCNTDLPEKEIEKSEVQKLDDS-KKLTSPAARKEHTNHSVSQPSDLV 119
CHE KD L AKTT+ DL E E EK EVQK K+L+S +QPSDLV
Sbjct: 61 CHETKDALVAKTTSGKNDLHEDESEKHEVQKKSGGDKELSS------------TQPSDLV 108
Query: 120 TERQGSYTQIVDTKAVATGLNLSPNANSMQSPYSSKNSQPNTPFSSSKPLQLDDKKNYDD 179
TE+ GSYT + T+AV GLNLSPNAN+M SPYSSKNS P TPFSS+KPL DKKNYDD
Sbjct: 109 TEKNGSYTHVDTTEAVLAGLNLSPNANNMHSPYSSKNSLPKTPFSSTKPLHHYDKKNYDD 168
Query: 180 EDNWSLASSAFSMRTARSKVTQGSAPTFKCSARXXXXXXXXXXXXXXXXXXXXXXNQYEA 239
EDNWS+ASSA SMRTARSKVTQGSAPTF+ S R +QYEA
Sbjct: 169 EDNWSVASSAMSMRTARSKVTQGSAPTFRSSERAAKRREFYLKLEEKNRALLEEKSQYEA 228
Query: 240 RQKEEQEAAIKQLRKNLVIRAKP 262
R KEEQEAAIKQ+RKNLVI+AKP
Sbjct: 229 RLKEEQEAAIKQMRKNLVIKAKP 251
>Medtr7g115310.1 | FAD/NAD(P)-binding oxidoreductase family protein
| HC | chr7:47633584-47625724 | 20130731
Length = 867
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/275 (48%), Positives = 173/275 (62%), Gaps = 20/275 (7%)
Query: 1 MGREVSETQVVDKKPNGVIAASNGDSNDKAHISSKIAAVKAEAKDHEVKECTKDNDFVEK 60
MGREV+ QV+DKKPNG+ ASNG D+ +S KIA + +A DHE+KE + N FVEK
Sbjct: 1 MGREVTGIQVMDKKPNGL--ASNGSFGDRIRVSPKIAKM-VQAMDHEIKESAEGNSFVEK 57
Query: 61 CHEKKDVLSAKTTNCNTDLPEKEIEKSEVQKLDDSKKLTSPAAR-----KEHTNHSVSQP 115
E+KDVL+ K+T N L E++ EKSE K++ K+LTSP A KEHT+ S Q
Sbjct: 58 HQERKDVLNTKSTKLNAGLSEEKNEKSEEPKMEGDKELTSPTAITIPVDKEHTSPSAPQQ 117
Query: 116 SDLVTERQGSYTQIVDTKAVATGLNLSPNANSMQSPYSSKN--------SQPNTPFSSSK 167
SD TE+ ++TQ VDT+AVA G +LSPNAN+ SP ++ SQ N+PFSS K
Sbjct: 118 SDQATEKHVTHTQTVDTEAVANGQDLSPNANNTHSPNTNNTHSPNSSKNSQSNSPFSSRK 177
Query: 168 PLQLDDKKNYDDEDNWSLASSAFSMRTARSKVTQGSAPTFKCSARXXXXXXXXXXXXXXX 227
L DKK++DDEDNWS+ASS+ + KVT G+APTF+ R
Sbjct: 178 -LAQHDKKHHDDEDNWSVASSS---VASTRKVTVGTAPTFRIYERAEKRKEFYMKLEEKN 233
Query: 228 XXXXXXXNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
QYEAR+KEE+EAA+KQLRK+LVI+AKP
Sbjct: 234 RALEEERLQYEARRKEEEEAALKQLRKSLVIKAKP 268
>Medtr1g075310.1 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:33342141-33338595 | 20130731
Length = 383
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 136/286 (47%), Gaps = 37/286 (12%)
Query: 1 MGREVSETQVVDKKPNGVIAASNGDSNDKAH--------ISSKIAAVKAEAKDHEVKECT 52
MG E S+ ++ K+P+ V+ S+G S D H ++ + + H +E T
Sbjct: 1 MGIEDSDICII-KEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEEST 59
Query: 53 KDNDFVEKCHEKKDVLSAKTTNCNTDLPEKEIEKSEVQKLDDSKKLTSPAARKEH---TN 109
K+ + V++C + V + +N I KSE + D + + + + K H N
Sbjct: 60 KEYE-VKECTTEVSVKAPDVSN---------IRKSEEKLTPDFEGVLNAKSSKPHKTRGN 109
Query: 110 H--------SVSQPSDLVTERQGSY----TQIVDTKAVATGLNLSPNANSMQSPYSSKNS 157
H +V +P L TER+ + T D K G S N ++ S + K +
Sbjct: 110 HKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKG-GHGRK-SVNKKNVLSSNTLKQN 167
Query: 158 QPNTPFSSSKPLQLDDKKNYDDEDNWSLAS-SAFSMRTARSKVTQGSAPTFKCSARXXXX 216
Q TP KPL+ D+KK+ D++D+ S+AS +A S+++ +S+ T SAP+F+ + R
Sbjct: 168 QLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRR 227
Query: 217 XXXXXXXXXXXXXXXXXXNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
NQ EAR KEE+E AIKQLR++L +A P
Sbjct: 228 KEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASP 273
>Medtr1g075310.2 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:33341243-33338595 | 20130731
Length = 383
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 136/286 (47%), Gaps = 37/286 (12%)
Query: 1 MGREVSETQVVDKKPNGVIAASNGDSNDKAH--------ISSKIAAVKAEAKDHEVKECT 52
MG E S+ ++ K+P+ V+ S+G S D H ++ + + H +E T
Sbjct: 1 MGIEDSDICII-KEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEEST 59
Query: 53 KDNDFVEKCHEKKDVLSAKTTNCNTDLPEKEIEKSEVQKLDDSKKLTSPAARKEH---TN 109
K+ + V++C + V + +N I KSE + D + + + + K H N
Sbjct: 60 KEYE-VKECTTEVSVKAPDVSN---------IRKSEEKLTPDFEGVLNAKSSKPHKTRGN 109
Query: 110 H--------SVSQPSDLVTERQGSY----TQIVDTKAVATGLNLSPNANSMQSPYSSKNS 157
H +V +P L TER+ + T D K G S N ++ S + K +
Sbjct: 110 HKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKG-GHGRK-SVNKKNVLSSNTLKQN 167
Query: 158 QPNTPFSSSKPLQLDDKKNYDDEDNWSLAS-SAFSMRTARSKVTQGSAPTFKCSARXXXX 216
Q TP KPL+ D+KK+ D++D+ S+AS +A S+++ +S+ T SAP+F+ + R
Sbjct: 168 QLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRR 227
Query: 217 XXXXXXXXXXXXXXXXXXNQYEARQKEEQEAAIKQLRKNLVIRAKP 262
NQ EAR KEE+E AIKQLR++L +A P
Sbjct: 228 KEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASP 273