Miyakogusa Predicted Gene

Lj5g3v1359430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1359430.1 tr|G7IR90|G7IR90_MEDTR Thymidylate kinase
OS=Medicago truncatula GN=MTR_2g084750 PE=3
SV=1,82.01,0,Thymidylate_kin,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL; THYMIDYLATE
KINASE,,NODE_61823_length_782_cov_90.118927.path1.1
         (234 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0274s0020.1 | P-loop nucleoside triphosphate hydrolase supe...   400   e-112
Medtr1g092440.1 | P-loop nucleoside triphosphate hydrolase super...   369   e-102
Medtr0271s0010.1 | P-loop nucleoside triphosphate hydrolase supe...   200   1e-51
Medtr0271s0030.1 | thymidylate kinase | HC | scaffold0271:7578-6...   171   7e-43

>Medtr0274s0020.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | scaffold0274:8441-12377 |
           20130731
          Length = 263

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/240 (82%), Positives = 213/240 (88%), Gaps = 7/240 (2%)

Query: 1   MIYGTF------RSFTPLVLLQNSLNSRVKFSSKCSPRKITMEGRKLNCSMEGNINESRG 54
           MIYGT        SF  LVL  NSLN +VK SSKCSPR+I ME   L+CS+EGN  ESRG
Sbjct: 1   MIYGTCITALKSLSFRALVL-PNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRG 59

Query: 55  ALVVLEGLDRSGKSSQCTRLVSYLEGQGINAELLRFPDRTTSVGQMISAYLTNTSQLDDH 114
           AL+VLEGLDRSGKSSQC+RLVSYLEG+G++AEL RFPDRTT+VGQMISAYLTN SQLDDH
Sbjct: 60  ALIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDH 119

Query: 115 TIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLLAP 174
           TIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGL+ +WCK+PE GLLAP
Sbjct: 120 TIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAP 179

Query: 175 DLVAYLDISPEKAAERGGYGDERYEKLEFQKKVARSYKVLHDHSWKVVDACQPIEDVEKQ 234
           DLVAYLDISP+KAAERGGYGDERYEKLEFQ+KVA  YKVLHD SWK+VDACQPIEDVEKQ
Sbjct: 180 DLVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVLHDASWKIVDACQPIEDVEKQ 239


>Medtr1g092440.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | LC | chr1:41419966-41427313 |
           20130731
          Length = 626

 Score =  369 bits (948), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/228 (80%), Positives = 199/228 (87%), Gaps = 7/228 (3%)

Query: 1   MIYGTF------RSFTPLVLLQNSLNSRVKFSSKCSPRKITMEGRKLNCSMEGNINESRG 54
           MIYGT        SF  LV   NSLN +VK SSKCSPR+I ME   L+CS+EGN  ESRG
Sbjct: 1   MIYGTCITALKSLSFRALVF-PNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRG 59

Query: 55  ALVVLEGLDRSGKSSQCTRLVSYLEGQGINAELLRFPDRTTSVGQMISAYLTNTSQLDDH 114
           AL+VLEGLDRSGKSSQC+RLVSYLEG+G++AEL RFPDRTT+VGQMISAYLTN SQLDDH
Sbjct: 60  ALIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDH 119

Query: 115 TIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLLAP 174
           TIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGL+ +WCKAPE GLLAP
Sbjct: 120 TIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPENGLLAP 179

Query: 175 DLVAYLDISPEKAAERGGYGDERYEKLEFQKKVARSYKVLHDHSWKVV 222
           DLVAYLDISP+KAAERGGYGDERYEKLEFQ+KVA  YKVLHD SWK +
Sbjct: 180 DLVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVLHDASWKSI 227


>Medtr0271s0010.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | scaffold0271:1879-482 |
           20130731
          Length = 141

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 114/137 (83%), Gaps = 7/137 (5%)

Query: 1   MIYGTF------RSFTPLVLLQNSLNSRVKFSSKCSPRKITMEGRKLNCSMEGNINESRG 54
           MIYGT        SF  LVL  NSLN +VK SSKCSPR+I ME   L+CS+EGN  ESRG
Sbjct: 1   MIYGTCITALKSLSFRALVL-PNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRG 59

Query: 55  ALVVLEGLDRSGKSSQCTRLVSYLEGQGINAELLRFPDRTTSVGQMISAYLTNTSQLDDH 114
           AL+VLEGLDRSGKSSQC+RLVSYLEG+G++AEL RFPDRTT+VGQMISAYLTN SQLDDH
Sbjct: 60  ALIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDH 119

Query: 115 TIHLLFSANRWEKRSLM 131
           TIHLLFSANRWEKR ++
Sbjct: 120 TIHLLFSANRWEKRFVL 136


>Medtr0271s0030.1 | thymidylate kinase | HC | scaffold0271:7578-6383
           | 20130731
          Length = 150

 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 80/91 (87%), Positives = 86/91 (94%)

Query: 131 METKLKSGTTLIVDRYSYSGVAFSSAKGLNFEWCKAPEIGLLAPDLVAYLDISPEKAAER 190
           METKLKSGTTLIVDRYSYSGVAFSSAKGL+ +WCK+PE GLLAPDLVAYLDISP+KAAER
Sbjct: 1   METKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAPDLVAYLDISPDKAAER 60

Query: 191 GGYGDERYEKLEFQKKVARSYKVLHDHSWKV 221
           GGYGDERYEKLEFQ+KVA  YKVLHD SWK+
Sbjct: 61  GGYGDERYEKLEFQQKVAEHYKVLHDASWKL 91