Miyakogusa Predicted Gene

Lj5g3v1353010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1353010.1 Non Characterized Hit- tr|F6H618|F6H618_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,76.14,0,DUF640,Domain of unknown function DUF640; seg,NULL; FAMILY
NOT NAMED,NULL,CUFF.55178.1
         (186 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g080210.1 | light-dependent short hypocotyls protein | HC ...   216   1e-56
Medtr1g069825.1 | G1-like protein | HC | chr1:30504897-30503357 ...   201   4e-52
Medtr7g097030.2 | G1-like protein | HC | chr7:38979364-38981430 ...   201   4e-52
Medtr7g097030.1 | G1-like protein | HC | chr7:38979466-38981430 ...   201   4e-52
Medtr1g075990.1 | DUF640 family protein | HC | chr1:33672489-336...   201   5e-52
Medtr5g072510.1 | DUF640 family protein | HC | chr5:30863762-308...   195   2e-50
Medtr3g031830.1 | DUF640 family protein | HC | chr3:26584580-265...   195   2e-50
Medtr1g442860.1 | G1-like protein | HC | chr1:15969985-15970629 ...   194   4e-50
Medtr7g115700.1 | light-dependent short hypocotyls protein | HC ...   192   2e-49
Medtr4g094428.1 | G1-like protein | HC | chr4:37973932-37975541 ...   189   1e-48
Medtr2g076400.1 | DUF640 family protein | HC | chr2:32002605-319...   171   5e-43
Medtr2g016110.2 | DUF640 family protein | HC | chr2:4862736-4867...   169   1e-42
Medtr2g016110.1 | DUF640 family protein | HC | chr2:4862701-4867...   169   1e-42
Medtr2g092950.1 | DUF640 family protein | HC | chr2:39556136-395...   168   3e-42
Medtr4g079930.1 | DUF640 family protein | HC | chr4:30941651-309...   165   2e-41
Medtr8g086350.1 | DUF640 family protein | HC | chr8:35814297-358...   154   3e-38
Medtr1g114020.1 | DUF640 family protein | LC | chr1:51438670-514...    84   1e-16

>Medtr1g080210.1 | light-dependent short hypocotyls protein | HC |
           chr1:35607822-35609699 | 20130731
          Length = 182

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 111/141 (78%), Positives = 120/141 (85%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTFCQYLRNHRPPLSL+LCSG+HVLEFL+YLDQFGKTKVHNH        
Sbjct: 40  RYENQKRRDWNTFCQYLRNHRPPLSLALCSGSHVLEFLNYLDQFGKTKVHNHPCPFFGIP 99

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEENGGRPETNPFG+R+VRIYLRDVRDFQ K+R
Sbjct: 100 NPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKSR 159

Query: 162 GVSYEKKRKRPKPKMITTTAA 182
           GVSYEKKRKRPKPK+  TT++
Sbjct: 160 GVSYEKKRKRPKPKVSATTSS 180


>Medtr1g069825.1 | G1-like protein | HC | chr1:30504897-30503357 |
           20130731
          Length = 222

 Score =  201 bits (510), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 96/130 (73%), Positives = 106/130 (81%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTF QYL+NHRPPLSLS CSGAHVLEFL YLDQFGKTKVH          
Sbjct: 52  RYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHP 111

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAA+EENGG+PETNPFGARAVR+YLR+VRD Q+KAR
Sbjct: 112 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKAR 171

Query: 162 GVSYEKKRKR 171
           G+SYEKK+++
Sbjct: 172 GISYEKKKRK 181


>Medtr7g097030.2 | G1-like protein | HC | chr7:38979364-38981430 |
           20130731
          Length = 214

 Score =  201 bits (510), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 96/130 (73%), Positives = 106/130 (81%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTF QYL+NHRPPLSLS CSGAHVLEFL YLDQFGKTKVH          
Sbjct: 64  RYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHP 123

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAA+EENGG+PETNPFGARAVR+YLR+VRD Q+KAR
Sbjct: 124 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKAR 183

Query: 162 GVSYEKKRKR 171
           G+SYEKK+++
Sbjct: 184 GISYEKKKRK 193


>Medtr7g097030.1 | G1-like protein | HC | chr7:38979466-38981430 |
           20130731
          Length = 214

 Score =  201 bits (510), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 96/130 (73%), Positives = 106/130 (81%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTF QYL+NHRPPLSLS CSGAHVLEFL YLDQFGKTKVH          
Sbjct: 64  RYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHP 123

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAA+EENGG+PETNPFGARAVR+YLR+VRD Q+KAR
Sbjct: 124 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKAR 183

Query: 162 GVSYEKKRKR 171
           G+SYEKK+++
Sbjct: 184 GISYEKKKRK 193


>Medtr1g075990.1 | DUF640 family protein | HC |
           chr1:33672489-33671080 | 20130731
          Length = 197

 Score =  201 bits (510), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 106/130 (81%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTF QYLRNHRPPLSLS CSGAHVLEFL YLDQFGKTKVH+         
Sbjct: 53  RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHSQICPFFGHP 112

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAA+EENGG+PE NPFGARAVR++LR+VRD Q+KAR
Sbjct: 113 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEDNPFGARAVRLFLREVRDSQSKAR 172

Query: 162 GVSYEKKRKR 171
           G+SYEKK+++
Sbjct: 173 GISYEKKKRK 182


>Medtr5g072510.1 | DUF640 family protein | HC |
           chr5:30863762-30865232 | 20130731
          Length = 225

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 94/132 (71%), Positives = 105/132 (79%), Gaps = 1/132 (0%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYLRNH+PPL+L+LCSGAHV+EFL YLDQFGKTKVH          
Sbjct: 37  RYESQKRRDWNTFQQYLRNHKPPLTLALCSGAHVIEFLKYLDQFGKTKVHVIGCPYFGQP 96

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     +QAWGSLDALIGRLRAA+EENGG+PE+NPFG RAVRIYLR+V+D Q KAR
Sbjct: 97  NPPSPCACPLKQAWGSLDALIGRLRAAFEENGGKPESNPFGTRAVRIYLREVKDGQAKAR 156

Query: 162 GVSYE-KKRKRP 172
           GV YE KKRKRP
Sbjct: 157 GVPYEKKKRKRP 168


>Medtr3g031830.1 | DUF640 family protein | HC |
           chr3:26584580-26586158 | 20130731
          Length = 223

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/145 (66%), Positives = 110/145 (75%), Gaps = 4/145 (2%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL+NH+PPL+L  CSGAHV+EFL YLDQFGKTKVH          
Sbjct: 42  RYESQKRRDWNTFLQYLQNHKPPLTLVRCSGAHVIEFLKYLDQFGKTKVHVSGCPYFGHP 101

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     +QAWGSLDALIGRLRAAYEENGGRPE+NPFGA+AVRIYLR+VR+ Q KAR
Sbjct: 102 NPPAPCACPLKQAWGSLDALIGRLRAAYEENGGRPESNPFGAKAVRIYLREVREGQAKAR 161

Query: 162 GVSYE-KKRKRPKPKMITTTAATAS 185
           G+ YE KKRKRP    +T  A ++S
Sbjct: 162 GIPYEKKKRKRP---AVTVAAVSSS 183


>Medtr1g442860.1 | G1-like protein | HC | chr1:15969985-15970629 |
           20130731
          Length = 214

 Score =  194 bits (493), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 94/125 (75%), Positives = 99/125 (79%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYENQKRRDWNTF QYLRNHRPPLSLS CSGAHVLEFL YLDQFGKTKVH          
Sbjct: 65  RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTLICPFYGHP 124

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAA+EENGG+PE NPFGARAVR+YLR+VRD Q KAR
Sbjct: 125 NPPASCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKAR 184

Query: 162 GVSYE 166
           G+SYE
Sbjct: 185 GISYE 189


>Medtr7g115700.1 | light-dependent short hypocotyls protein | HC |
           chr7:47835405-47837009 | 20130731
          Length = 170

 Score =  192 bits (487), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/147 (67%), Positives = 111/147 (75%), Gaps = 6/147 (4%)

Query: 42  RYENQKRRDWNTFCQYLRNHRP-PLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXX 100
           RYE+QKRRDWNTFCQYLRNHRP PLS S+C+G HVLEFLHYLDQFGKTKVHN        
Sbjct: 27  RYESQKRRDWNTFCQYLRNHRPVPLSASMCNGTHVLEFLHYLDQFGKTKVHNPTCPFFGM 86

Query: 101 XXXXXXXXXXXRQAWGSLDALIGRLRAAYEE--NGGRPETNPFGARAVRIYLRDVRDFQT 158
                      RQAWGSLDAL+GRLRAAY++  NGG   +NPFG  AVR YLRDVRDFQ+
Sbjct: 87  PNPPSPCACPLRQAWGSLDALVGRLRAAYDQEINGG--SSNPFGDGAVRFYLRDVRDFQS 144

Query: 159 KARGVSYEKKRKRPKPKMITTTAATAS 185
           KARGVSY KKRKRP  + ITT + ++S
Sbjct: 145 KARGVSYHKKRKRPN-RNITTISQSSS 170


>Medtr4g094428.1 | G1-like protein | HC | chr4:37973932-37975541 |
           20130731
          Length = 234

 Score =  189 bits (479), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 90/130 (69%), Positives = 102/130 (78%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL+NHRPPL+LS CSGAHVLEFL YLDQFGKTKVH+         
Sbjct: 46  RYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHVLEFLRYLDQFGKTKVHSENCAYFGNS 105

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     +QAWGSLDALIGRLRAA+EENGG  E NPFGARAVR+YLR+VRD Q KAR
Sbjct: 106 HPPGPCPCPLKQAWGSLDALIGRLRAAFEENGGSQEMNPFGARAVRLYLREVRDAQAKAR 165

Query: 162 GVSYEKKRKR 171
           G+ YEKK+++
Sbjct: 166 GIGYEKKKRK 175


>Medtr2g076400.1 | DUF640 family protein | HC |
           chr2:32002605-31999823 | 20130731
          Length = 178

 Score =  171 bits (432), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 92/124 (74%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYLRN RPP++LS C+  HVLEFL YLDQFGKTKVH          
Sbjct: 33  RYESQKRRDWNTFGQYLRNQRPPVALSNCNSNHVLEFLRYLDQFGKTKVHLQGCLFFGQT 92

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     +QAWGSLDALIGRLRAAYEENGG PETNPF + ++RIYLR+VRD Q KAR
Sbjct: 93  EPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGSIRIYLREVRDSQAKAR 152

Query: 162 GVSY 165
           G+ Y
Sbjct: 153 GIPY 156


>Medtr2g016110.2 | DUF640 family protein | HC | chr2:4862736-4867366
           | 20130731
          Length = 184

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 80/124 (64%), Positives = 92/124 (74%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QK+RDWNTF QYLRN  PP+SLS C+  HVLEFL YLDQFGKTKVH H        
Sbjct: 35  RYESQKKRDWNTFGQYLRNQSPPVSLSQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQP 94

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEE+GG PE NPFG  A+R+YLR+V++ Q+KAR
Sbjct: 95  DPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPENNPFGTGAIRVYLREVKECQSKAR 154

Query: 162 GVSY 165
           G+ Y
Sbjct: 155 GIPY 158


>Medtr2g016110.1 | DUF640 family protein | HC | chr2:4862701-4867406
           | 20130731
          Length = 184

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 80/124 (64%), Positives = 92/124 (74%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QK+RDWNTF QYLRN  PP+SLS C+  HVLEFL YLDQFGKTKVH H        
Sbjct: 35  RYESQKKRDWNTFGQYLRNQSPPVSLSQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQP 94

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEE+GG PE NPFG  A+R+YLR+V++ Q+KAR
Sbjct: 95  DPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPENNPFGTGAIRVYLREVKECQSKAR 154

Query: 162 GVSY 165
           G+ Y
Sbjct: 155 GIPY 158


>Medtr2g092950.1 | DUF640 family protein | HC |
           chr2:39556136-39560514 | 20130731
          Length = 167

 Score =  168 bits (425), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 90/124 (72%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL N RPP+ LS C+  HVLEFL YLDQFGKTKVH          
Sbjct: 23  RYESQKRRDWNTFGQYLNNLRPPVPLSHCNSNHVLEFLRYLDQFGKTKVHLQGCMFYGQP 82

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEENGG PETNPF + A+R+YLR+VR+ Q KAR
Sbjct: 83  EPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGTPETNPFASGAIRVYLREVRECQAKAR 142

Query: 162 GVSY 165
           G+ Y
Sbjct: 143 GIPY 146


>Medtr4g079930.1 | DUF640 family protein | HC |
           chr4:30941651-30951885 | 20130731
          Length = 176

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 90/124 (72%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL N RPP+ LS C+  HVL+FL YLDQFGKTKVH          
Sbjct: 29  RYESQKRRDWNTFGQYLNNMRPPVPLSQCNSNHVLDFLRYLDQFGKTKVHVQGCMFYGQP 88

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     RQAWGSLDALIGRLRAAYEENGG P+TNPF + ++R+YLR++R+ Q KAR
Sbjct: 89  EPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPDTNPFASGSIRVYLREIRESQAKAR 148

Query: 162 GVSY 165
           G+ Y
Sbjct: 149 GIPY 152


>Medtr8g086350.1 | DUF640 family protein | HC |
           chr8:35814297-35815054 | 20130731
          Length = 185

 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 87/124 (70%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHXXXXXXXX 101
           RYE+QKRRDWNTF QYL++  P + LS C+  HVL+FL YLDQFGKTKVH          
Sbjct: 31  RYESQKRRDWNTFNQYLKSQNPLVPLSHCNFNHVLDFLRYLDQFGKTKVHFQGCIFFGQP 90

Query: 102 XXXXXXXXXXRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKAR 161
                     +QAWGSLDALIGRLRAAYEENGG  ETNPF   A+R+YLR+V+D Q KAR
Sbjct: 91  TPPAPCACPLKQAWGSLDALIGRLRAAYEENGGSSETNPFAGGAIRVYLREVKDSQQKAR 150

Query: 162 GVSY 165
           G+ Y
Sbjct: 151 GIPY 154


>Medtr1g114020.1 | DUF640 family protein | LC |
           chr1:51438670-51440377 | 20130731
          Length = 177

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/41 (87%), Positives = 38/41 (92%)

Query: 42  RYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYL 82
           RYENQKRRDWNTF QYL+NHRPPLSLSLC+GAHVLEFL  L
Sbjct: 71  RYENQKRRDWNTFVQYLKNHRPPLSLSLCTGAHVLEFLREL 111