Miyakogusa Predicted Gene

Lj5g3v1351990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1351990.1 tr|G7JTT9|G7JTT9_MEDTR Dihydroorotase OS=Medicago
truncatula GN=MTR_4g078370 PE=3 SV=1,90,0,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; DIHYDROOROTASE_2,Dihydroorotase, conserved
site; Am,CUFF.55177.1
         (221 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g078370.1 | dihydroorotase | HC | chr4:30209873-30203784 |...   420   e-118
Medtr4g078370.3 | dihydroorotase | HC | chr4:30209873-30203784 |...   420   e-118
Medtr4g078370.2 | dihydroorotase | HC | chr4:30209873-30203784 |...   420   e-118

>Medtr4g078370.1 | dihydroorotase | HC | chr4:30209873-30203784 |
           20130731
          Length = 346

 Score =  420 bits (1080), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 198/220 (90%), Positives = 209/220 (95%)

Query: 1   MVEQDLPLLVHGEVTNPEVDVFDREKVFIETILEPLVQRLPRLKVVMEHITTMDAVKFVE 60
           MVEQ LPLLVHGEVTNPEVD+FDREKVFIETILEPL+QRLP+LKVVMEHITTMDAVKFVE
Sbjct: 126 MVEQGLPLLVHGEVTNPEVDIFDREKVFIETILEPLIQRLPQLKVVMEHITTMDAVKFVE 185

Query: 61  SCKEGNVAATVTPQHLFLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTGGSTRFFL 120
           SCKEG VAATVTPQH+ LNRNALFQGGLQPHNYCLPVLKREIHRQAIVSA+T GS RFFL
Sbjct: 186 SCKEGYVAATVTPQHILLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAITSGSRRFFL 245

Query: 121 GTDSAPHDRRNKECSCGCAGIYNSLVALSIYAKVFEEAGALDKLEAFTSFNGPDFYGLPR 180
           GTDSAPHDRR KE +CGCAGIYNS VALS+YAKVFEEAGALDKLEAFTSFNGPDFYG+PR
Sbjct: 246 GTDSAPHDRRKKESACGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGIPR 305

Query: 181 NKLKIKLRKAPWRVPEYLSFPFGDIVPMCAGQTLEWEALL 220
           NK KIKLRK+PWRVPE LSFPFGDI+PM AG+TLEWEALL
Sbjct: 306 NKSKIKLRKSPWRVPECLSFPFGDIIPMFAGETLEWEALL 345


>Medtr4g078370.3 | dihydroorotase | HC | chr4:30209873-30203784 |
           20130731
          Length = 346

 Score =  420 bits (1080), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 198/220 (90%), Positives = 209/220 (95%)

Query: 1   MVEQDLPLLVHGEVTNPEVDVFDREKVFIETILEPLVQRLPRLKVVMEHITTMDAVKFVE 60
           MVEQ LPLLVHGEVTNPEVD+FDREKVFIETILEPL+QRLP+LKVVMEHITTMDAVKFVE
Sbjct: 126 MVEQGLPLLVHGEVTNPEVDIFDREKVFIETILEPLIQRLPQLKVVMEHITTMDAVKFVE 185

Query: 61  SCKEGNVAATVTPQHLFLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTGGSTRFFL 120
           SCKEG VAATVTPQH+ LNRNALFQGGLQPHNYCLPVLKREIHRQAIVSA+T GS RFFL
Sbjct: 186 SCKEGYVAATVTPQHILLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAITSGSRRFFL 245

Query: 121 GTDSAPHDRRNKECSCGCAGIYNSLVALSIYAKVFEEAGALDKLEAFTSFNGPDFYGLPR 180
           GTDSAPHDRR KE +CGCAGIYNS VALS+YAKVFEEAGALDKLEAFTSFNGPDFYG+PR
Sbjct: 246 GTDSAPHDRRKKESACGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGIPR 305

Query: 181 NKLKIKLRKAPWRVPEYLSFPFGDIVPMCAGQTLEWEALL 220
           NK KIKLRK+PWRVPE LSFPFGDI+PM AG+TLEWEALL
Sbjct: 306 NKSKIKLRKSPWRVPECLSFPFGDIIPMFAGETLEWEALL 345


>Medtr4g078370.2 | dihydroorotase | HC | chr4:30209873-30203784 |
           20130731
          Length = 346

 Score =  420 bits (1080), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 198/220 (90%), Positives = 209/220 (95%)

Query: 1   MVEQDLPLLVHGEVTNPEVDVFDREKVFIETILEPLVQRLPRLKVVMEHITTMDAVKFVE 60
           MVEQ LPLLVHGEVTNPEVD+FDREKVFIETILEPL+QRLP+LKVVMEHITTMDAVKFVE
Sbjct: 126 MVEQGLPLLVHGEVTNPEVDIFDREKVFIETILEPLIQRLPQLKVVMEHITTMDAVKFVE 185

Query: 61  SCKEGNVAATVTPQHLFLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTGGSTRFFL 120
           SCKEG VAATVTPQH+ LNRNALFQGGLQPHNYCLPVLKREIHRQAIVSA+T GS RFFL
Sbjct: 186 SCKEGYVAATVTPQHILLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAITSGSRRFFL 245

Query: 121 GTDSAPHDRRNKECSCGCAGIYNSLVALSIYAKVFEEAGALDKLEAFTSFNGPDFYGLPR 180
           GTDSAPHDRR KE +CGCAGIYNS VALS+YAKVFEEAGALDKLEAFTSFNGPDFYG+PR
Sbjct: 246 GTDSAPHDRRKKESACGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGIPR 305

Query: 181 NKLKIKLRKAPWRVPEYLSFPFGDIVPMCAGQTLEWEALL 220
           NK KIKLRK+PWRVPE LSFPFGDI+PM AG+TLEWEALL
Sbjct: 306 NKSKIKLRKSPWRVPECLSFPFGDIIPMFAGETLEWEALL 345