Miyakogusa Predicted Gene

Lj5g3v1340870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1340870.1 Non Characterized Hit- tr|D7FGX7|D7FGX7_ECTSI
Putative uncharacterized protein OS=Ectocarpus
silicul,41.18,3e-16,SUBFAMILY NOT NAMED,NULL; THYROID RECEPTOR
INTERACTING PROTEIN RELATED,NULL; no description,NULL,CUFF.55158.1
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g079925.2 | ASCH domain protein | HC | chr1:35508008-35503...   278   1e-75
Medtr1g079925.1 | ASCH domain protein | HC | chr1:35508223-35503...   278   1e-75

>Medtr1g079925.2 | ASCH domain protein | HC | chr1:35508008-35503979
           | 20130731
          Length = 516

 Score =  278 bits (712), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 130/145 (89%), Positives = 138/145 (95%)

Query: 1   MEYFYKEIYALNGITDINFPQHYPVSRLLGCVEVVGCLKREELASWEMVPEGVRLEAQTD 60
           ME FYKEIYALNGITDINFPQHYPVSRLLGCVEVVGCL REE++ WEMVPE VRLEA TD
Sbjct: 68  MECFYKEIYALNGITDINFPQHYPVSRLLGCVEVVGCLNREEISCWEMVPESVRLEALTD 127

Query: 61  FCWLCEQPQKLLIPFEMRGYQGVYNLERKIYEAAVRGLSPVDSPLPVKFPLPDPRDPFSL 120
           +CWLCEQPQKLLIPFEMRGYQGVYNLERKIYEAAVRGL+PVDSPLPVKFPLPDP DPFSL
Sbjct: 128 YCWLCEQPQKLLIPFEMRGYQGVYNLERKIYEAAVRGLAPVDSPLPVKFPLPDPSDPFSL 187

Query: 121 RPGRIAALTPNLKATEVDKSSSVSL 145
           +PGR++ALT NLKATEVDKSSS+SL
Sbjct: 188 KPGRVSALTRNLKATEVDKSSSLSL 212


>Medtr1g079925.1 | ASCH domain protein | HC | chr1:35508223-35503915
           | 20130731
          Length = 506

 Score =  278 bits (711), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 130/145 (89%), Positives = 138/145 (95%)

Query: 1   MEYFYKEIYALNGITDINFPQHYPVSRLLGCVEVVGCLKREELASWEMVPEGVRLEAQTD 60
           ME FYKEIYALNGITDINFPQHYPVSRLLGCVEVVGCL REE++ WEMVPE VRLEA TD
Sbjct: 68  MECFYKEIYALNGITDINFPQHYPVSRLLGCVEVVGCLNREEISCWEMVPESVRLEALTD 127

Query: 61  FCWLCEQPQKLLIPFEMRGYQGVYNLERKIYEAAVRGLSPVDSPLPVKFPLPDPRDPFSL 120
           +CWLCEQPQKLLIPFEMRGYQGVYNLERKIYEAAVRGL+PVDSPLPVKFPLPDP DPFSL
Sbjct: 128 YCWLCEQPQKLLIPFEMRGYQGVYNLERKIYEAAVRGLAPVDSPLPVKFPLPDPSDPFSL 187

Query: 121 RPGRIAALTPNLKATEVDKSSSVSL 145
           +PGR++ALT NLKATEVDKSSS+SL
Sbjct: 188 KPGRVSALTRNLKATEVDKSSSLSL 212