Miyakogusa Predicted Gene

Lj5g3v1330840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1330840.1 Non Characterized Hit- tr|H9VC00|H9VC00_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,76.27,7e-17,seg,NULL,CUFF.55152.1
         (391 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g079830.1 | hypothetical protein | HC | chr1:35470780-3547...   565   e-161
Medtr1g079830.2 | hypothetical protein | HC | chr1:35470780-3547...   563   e-160
Medtr1g079830.4 | hypothetical protein | HC | chr1:35470791-3547...   399   e-111
Medtr1g079830.3 | hypothetical protein | HC | chr1:35470791-3547...   397   e-110
Medtr1g079830.5 | hypothetical protein | HC | chr1:35470780-3547...   228   1e-59

>Medtr1g079830.1 | hypothetical protein | HC |
           chr1:35470780-35473560 | 20130731
          Length = 394

 Score =  565 bits (1456), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 290/396 (73%), Positives = 320/396 (80%), Gaps = 7/396 (1%)

Query: 1   MADDLFEGXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXILKSSLKRPNPTPTE- 55
           MADDLFEG                                    ILKSSLKR NPT ++ 
Sbjct: 1   MADDLFEGLPPPSSITQSQPQLPILSVSTNNNTESSSLLSAPKPILKSSLKRSNPTQSDN 60

Query: 56  TQDTAPKKSLKFKLTTDASEAQVIEAMQKISSHIKNPAKFSKAAKLAIQLVQAGSVTSSV 115
           +Q  APKKSLKFK +TDASE QVI+AM+KISSHIKNPAKFSKAAKLAIQL++AGSV S V
Sbjct: 61  SQAAAPKKSLKFKTSTDASETQVIDAMEKISSHIKNPAKFSKAAKLAIQLIEAGSVKSGV 120

Query: 116 SDYFFAILEAAMSSSSQHCTDPSVRADYHALFEVAQDIKEHLDKKQKNQLATWTINAVVA 175
           SDYFFAILEAAM S    CTDPSVRADYH+LF  AQ+ KEHL+KKQKNQLATWTI+AVVA
Sbjct: 121 SDYFFAILEAAMLSPVS-CTDPSVRADYHSLFTAAQNAKEHLNKKQKNQLATWTISAVVA 179

Query: 176 NDLYTDDSFVFSRAAGKIKEAISNLPVATEEEDKDEATSLKDSTVLVGEGGETVAANEHI 235
           NDLYTDDSFVFS+AAG+IKEAISNLPVATEE+D +EA SL D TV+  EGG+T + NE  
Sbjct: 180 NDLYTDDSFVFSKAAGQIKEAISNLPVATEEDDTEEAISLNDGTVMADEGGQT-SPNEEN 238

Query: 236 TDAEEADPFGLDALIPGSTKKGEKLKAKNGEAVKIRREDEEETKRFIKSQREALITCLEI 295
              EEADPFGLD+LIPGSTKKGEK K KN  A+KIR+E+EEETKRF++ QR+ALITCLEI
Sbjct: 239 NALEEADPFGLDSLIPGSTKKGEKFKGKNDAAMKIRKEEEEETKRFLQLQRKALITCLEI 298

Query: 296 AARRYKTPWCQTVIDILVKHAFDNVARFTAHQRDAVGKLWASIREQQTRRKQGKSVNGKL 355
           AARRYKTPWCQTVIDILVKHA DNVARFTAHQRDAV KLWASI EQQTRRKQGKSVNGKL
Sbjct: 299 AARRYKTPWCQTVIDILVKHAVDNVARFTAHQRDAVRKLWASILEQQTRRKQGKSVNGKL 358

Query: 356 DVNAFEYLQEKYANEKISIRHSVGGSGDRKATQWLG 391
           DVN FE+LQ+KY+ EKISIRHSVGGSGDR+ATQWLG
Sbjct: 359 DVNGFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 394


>Medtr1g079830.2 | hypothetical protein | HC |
           chr1:35470780-35473626 | 20130731
          Length = 392

 Score =  563 bits (1450), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 289/395 (73%), Positives = 318/395 (80%), Gaps = 7/395 (1%)

Query: 1   MADDLFEGXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXILKSSLKRPNPTPTET 56
           MADDLFEG                                    ILKSSLKR NPT ++ 
Sbjct: 1   MADDLFEGLPPPSSITQSQPQLPILSVSTNNNTESSSLLSAPKPILKSSLKRSNPTQSDN 60

Query: 57  QDTAPKKSLKFKLTTDASEAQVIEAMQKISSHIKNPAKFSKAAKLAIQLVQAGSVTSSVS 116
              APKKSLKFK +TDASE QVI+AM+KISSHIKNPAKFSKAAKLAIQL++AGSV S VS
Sbjct: 61  SQ-APKKSLKFKTSTDASETQVIDAMEKISSHIKNPAKFSKAAKLAIQLIEAGSVKSGVS 119

Query: 117 DYFFAILEAAMSSSSQHCTDPSVRADYHALFEVAQDIKEHLDKKQKNQLATWTINAVVAN 176
           DYFFAILEAAM S    CTDPSVRADYH+LF  AQ+ KEHL+KKQKNQLATWTI+AVVAN
Sbjct: 120 DYFFAILEAAMLSPVS-CTDPSVRADYHSLFTAAQNAKEHLNKKQKNQLATWTISAVVAN 178

Query: 177 DLYTDDSFVFSRAAGKIKEAISNLPVATEEEDKDEATSLKDSTVLVGEGGETVAANEHIT 236
           DLYTDDSFVFS+AAG+IKEAISNLPVATEE+D +EA SL D TV+  EGG+T + NE   
Sbjct: 179 DLYTDDSFVFSKAAGQIKEAISNLPVATEEDDTEEAISLNDGTVMADEGGQT-SPNEENN 237

Query: 237 DAEEADPFGLDALIPGSTKKGEKLKAKNGEAVKIRREDEEETKRFIKSQREALITCLEIA 296
             EEADPFGLD+LIPGSTKKGEK K KN  A+KIR+E+EEETKRF++ QR+ALITCLEIA
Sbjct: 238 ALEEADPFGLDSLIPGSTKKGEKFKGKNDAAMKIRKEEEEETKRFLQLQRKALITCLEIA 297

Query: 297 ARRYKTPWCQTVIDILVKHAFDNVARFTAHQRDAVGKLWASIREQQTRRKQGKSVNGKLD 356
           ARRYKTPWCQTVIDILVKHA DNVARFTAHQRDAV KLWASI EQQTRRKQGKSVNGKLD
Sbjct: 298 ARRYKTPWCQTVIDILVKHAVDNVARFTAHQRDAVRKLWASILEQQTRRKQGKSVNGKLD 357

Query: 357 VNAFEYLQEKYANEKISIRHSVGGSGDRKATQWLG 391
           VN FE+LQ+KY+ EKISIRHSVGGSGDR+ATQWLG
Sbjct: 358 VNGFEWLQQKYSTEKISIRHSVGGSGDRRATQWLG 392


>Medtr1g079830.4 | hypothetical protein | HC |
           chr1:35470791-35473555 | 20130731
          Length = 307

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/309 (68%), Positives = 238/309 (77%), Gaps = 7/309 (2%)

Query: 1   MADDLFEGXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXILKSSLKRPNPTPTE- 55
           MADDLFEG                                    ILKSSLKR NPT ++ 
Sbjct: 1   MADDLFEGLPPPSSITQSQPQLPILSVSTNNNTESSSLLSAPKPILKSSLKRSNPTQSDN 60

Query: 56  TQDTAPKKSLKFKLTTDASEAQVIEAMQKISSHIKNPAKFSKAAKLAIQLVQAGSVTSSV 115
           +Q  APKKSLKFK +TDASE QVI+AM+KISSHIKNPAKFSKAAKLAIQL++AGSV S V
Sbjct: 61  SQAAAPKKSLKFKTSTDASETQVIDAMEKISSHIKNPAKFSKAAKLAIQLIEAGSVKSGV 120

Query: 116 SDYFFAILEAAMSSSSQHCTDPSVRADYHALFEVAQDIKEHLDKKQKNQLATWTINAVVA 175
           SDYFFAILEAAM S    CTDPSVRADYH+LF  AQ+ KEHL+KKQKNQLATWTI+AVVA
Sbjct: 121 SDYFFAILEAAMLSPV-SCTDPSVRADYHSLFTAAQNAKEHLNKKQKNQLATWTISAVVA 179

Query: 176 NDLYTDDSFVFSRAAGKIKEAISNLPVATEEEDKDEATSLKDSTVLVGEGGETVAANEHI 235
           NDLYTDDSFVFS+AAG+IKEAISNLPVATEE+D +EA SL D TV+  EGG+T + NE  
Sbjct: 180 NDLYTDDSFVFSKAAGQIKEAISNLPVATEEDDTEEAISLNDGTVMADEGGQT-SPNEEN 238

Query: 236 TDAEEADPFGLDALIPGSTKKGEKLKAKNGEAVKIRREDEEETKRFIKSQREALITCLEI 295
              EEADPFGLD+LIPGSTKKGEK K KN  A+KIR+E+EEETKRF++ QR+ALITCLEI
Sbjct: 239 NALEEADPFGLDSLIPGSTKKGEKFKGKNDAAMKIRKEEEEETKRFLQLQRKALITCLEI 298

Query: 296 AARRYKTPW 304
           AARRYKTPW
Sbjct: 299 AARRYKTPW 307


>Medtr1g079830.3 | hypothetical protein | HC |
           chr1:35470791-35473555 | 20130731
          Length = 305

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/308 (68%), Positives = 236/308 (76%), Gaps = 7/308 (2%)

Query: 1   MADDLFEGXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXILKSSLKRPNPTPTET 56
           MADDLFEG                                    ILKSSLKR NPT ++ 
Sbjct: 1   MADDLFEGLPPPSSITQSQPQLPILSVSTNNNTESSSLLSAPKPILKSSLKRSNPTQSDN 60

Query: 57  QDTAPKKSLKFKLTTDASEAQVIEAMQKISSHIKNPAKFSKAAKLAIQLVQAGSVTSSVS 116
              APKKSLKFK +TDASE QVI+AM+KISSHIKNPAKFSKAAKLAIQL++AGSV S VS
Sbjct: 61  SQ-APKKSLKFKTSTDASETQVIDAMEKISSHIKNPAKFSKAAKLAIQLIEAGSVKSGVS 119

Query: 117 DYFFAILEAAMSSSSQHCTDPSVRADYHALFEVAQDIKEHLDKKQKNQLATWTINAVVAN 176
           DYFFAILEAAM S    CTDPSVRADYH+LF  AQ+ KEHL+KKQKNQLATWTI+AVVAN
Sbjct: 120 DYFFAILEAAMLSPV-SCTDPSVRADYHSLFTAAQNAKEHLNKKQKNQLATWTISAVVAN 178

Query: 177 DLYTDDSFVFSRAAGKIKEAISNLPVATEEEDKDEATSLKDSTVLVGEGGETVAANEHIT 236
           DLYTDDSFVFS+AAG+IKEAISNLPVATEE+D +EA SL D TV+  EGG+T + NE   
Sbjct: 179 DLYTDDSFVFSKAAGQIKEAISNLPVATEEDDTEEAISLNDGTVMADEGGQT-SPNEENN 237

Query: 237 DAEEADPFGLDALIPGSTKKGEKLKAKNGEAVKIRREDEEETKRFIKSQREALITCLEIA 296
             EEADPFGLD+LIPGSTKKGEK K KN  A+KIR+E+EEETKRF++ QR+ALITCLEIA
Sbjct: 238 ALEEADPFGLDSLIPGSTKKGEKFKGKNDAAMKIRKEEEEETKRFLQLQRKALITCLEIA 297

Query: 297 ARRYKTPW 304
           ARRYKTPW
Sbjct: 298 ARRYKTPW 305


>Medtr1g079830.5 | hypothetical protein | HC |
           chr1:35470780-35473560 | 20130731
          Length = 221

 Score =  228 bits (580), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/189 (65%), Positives = 135/189 (71%), Gaps = 6/189 (3%)

Query: 1   MADDLFEGXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXILKSSLKRPNPTPTET 56
           MADDLFEG                                    ILKSSLKR NPT ++ 
Sbjct: 1   MADDLFEGLPPPSSITQSQPQLPILSVSTNNNTESSSLLSAPKPILKSSLKRSNPTQSDN 60

Query: 57  QDTAPKKSLKFKLTTDASEAQVIEAMQKISSHIKNPAKFSKAAKLAIQLVQAGSVTSSVS 116
              APKKSLKFK +TDASE QVI+AM+KISSHIKNPAKFSKAAKLAIQL++AGSV S VS
Sbjct: 61  SQ-APKKSLKFKTSTDASETQVIDAMEKISSHIKNPAKFSKAAKLAIQLIEAGSVKSGVS 119

Query: 117 DYFFAILEAAMSSSSQHCTDPSVRADYHALFEVAQDIKEHLDKKQKNQLATWTINAVVAN 176
           DYFFAILEAAM S    CTDPSVRADYH+LF  AQ+ KEHL+KKQKNQLATWTI+AVVAN
Sbjct: 120 DYFFAILEAAMLSPVS-CTDPSVRADYHSLFTAAQNAKEHLNKKQKNQLATWTISAVVAN 178

Query: 177 DLYTDDSFV 185
           DLYTDDSFV
Sbjct: 179 DLYTDDSFV 187