Miyakogusa Predicted Gene

Lj5g3v1327750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1327750.1 Non Characterized Hit- tr|Q10XM9|Q10XM9_TRIEI
Putative uncharacterized protein OS=Trichodesmium
eryt,25.07,2e-18,seg,NULL,CUFF.55537.1
         (439 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g079870.1 | hypothetical protein | HC | chr1:35482817-3548...   458   e-129

>Medtr1g079870.1 | hypothetical protein | HC |
           chr1:35482817-35481025 | 20130731
          Length = 449

 Score =  458 bits (1178), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/372 (63%), Positives = 279/372 (75%), Gaps = 6/372 (1%)

Query: 70  TLDIPGQIDILANRLGVWHEYAPLISSLIREGFTPPTIEELTGITGVEQNRFIVAAQVRD 129
            LDIPG+IDILANRLG WHEYAPLI+SL+REGF+PPT+EE TGITGVEQNR IVA QVRD
Sbjct: 82  NLDIPGRIDILANRLGAWHEYAPLITSLLREGFSPPTLEETTGITGVEQNRIIVATQVRD 141

Query: 130 SLLQSNTDPDLVSFFDNGGAELLYQIXXXXXXXXXXXXXFIVENKSDGKGANELARSMKD 189
           +L+Q+NTD +++S+FD+GGAE+LY+I             FIVE + DGKGA +LARS+KD
Sbjct: 142 TLVQANTDEEILSYFDSGGAEVLYEIRLLSTSQRAAAARFIVEKRYDGKGAQDLARSIKD 201

Query: 190 FPSRRGEKGWESFDYNLPGDCLSFMYYRLSREYNRNP-EQRDSVLEQALRVAESEKARDA 248
           FPSRRGEK WESFDY+LPGDCL+++YYR S+E N+NP + R + L+QAL   ES+KAR+ 
Sbjct: 202 FPSRRGEKHWESFDYHLPGDCLAYLYYRQSKE-NKNPSDPRTAFLQQALSAVESDKARNV 260

Query: 249 IQKELKXXXXXXXXXXXXXXXXXXXXXXRLKIGEXXXXXXXXXLPVCNADEGGDAILEAP 308
           I +EL                       RLKIGE         LPVC A+EG   I+EAP
Sbjct: 261 ILEELN--GKAEEEKVEDVVLKVPVNVVRLKIGEVAEATSVVVLPVCKAEEGERVIMEAP 318

Query: 309 SECRTVGEFGVVVAEKGWEKWVVLPGWEPLVELGKGCVVVSFVDARVLPWKA-NRWYKEE 367
           SE R  GEFG+VVAEKGWEKWVVLP W P+V LGKG VVVSF+DARVLPWKA NRW KEE
Sbjct: 319 SEIRKEGEFGIVVAEKGWEKWVVLPAWGPVVNLGKG-VVVSFLDARVLPWKANNRWCKEE 377

Query: 368 PILVVADRSKREVGADDGFYLVKVEDDGVGLKVERGLGLKERGVSESLGSVILVVRPPRE 427
           PILVVADRSKREV  DDGFYLVK + + VGLKV+RG  LKE GV+E LG+V++VVRPP E
Sbjct: 378 PILVVADRSKREVENDDGFYLVKDDGNDVGLKVQRGSILKEMGVNECLGNVVIVVRPPTE 437

Query: 428 EDDGQLSDEDWD 439
            D   LS+EDWD
Sbjct: 438 NDGDMLSEEDWD 449