Miyakogusa Predicted Gene

Lj5g3v1314590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1314590.1 Non Characterized Hit- tr|Q9FHS9|Q9FHS9_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,62.5,0.000000000003,seg,NULL,CUFF.55144.1
         (310 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g079763.1 | plant/MNJ8-150 protein | HC | chr1:35423926-35...   421   e-118

>Medtr1g079763.1 | plant/MNJ8-150 protein | HC |
           chr1:35423926-35420545 | 20130731
          Length = 311

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/259 (78%), Positives = 232/259 (89%)

Query: 52  KPLTVCFALTEPNSPKSLDPDPQSLLQEIADSFDLPSDYFSQFPSDLRLDLNDAAFDLSN 111
           +PL++CFALTE NSP S +PDP++LLQ+IADSFDLP DYF +FP+DLRLDLNDAAFDLSN
Sbjct: 53  QPLSLCFALTESNSPNSTEPDPKTLLQQIADSFDLPPDYFGKFPNDLRLDLNDAAFDLSN 112

Query: 112 GPVLDECGQELGQTLLNLSRAWELADTSTSHSLVAKLPLLEANLTGTAKSALGKRLVSAG 171
           GPVLDECG+ELG+TLLNLSRAWE+ADTS+S SLVAKLPL+EANLTGTAKSALG+RLVSAG
Sbjct: 113 GPVLDECGKELGETLLNLSRAWEIADTSSSRSLVAKLPLMEANLTGTAKSALGRRLVSAG 172

Query: 172 RRFQSMGQYGQGEPQKIAKAMIAAGRVLSASSTSAVIDEQPKEETRMLKFGDLQVEVTLE 231
           +RFQSMGQYGQGE QKIAKAMIAAGR LSASSTSAVID+QPKE+ + LKFG LQVE+T  
Sbjct: 173 KRFQSMGQYGQGETQKIAKAMIAAGRALSASSTSAVIDKQPKEKNKTLKFGALQVEITPT 232

Query: 232 KAIIGAVIGTIFGVLSWEIAQGIQSVPESSSQYANDSAFALAKSLRGALISLFYASTLLS 291
           KA IGA I  +FG+L+WEIAQGIQ+ PESS QYAND+A  LAKSLRG L+ +FY STLLS
Sbjct: 233 KANIGAAIAFVFGILTWEIAQGIQNTPESSLQYANDNALMLAKSLRGTLLVVFYGSTLLS 292

Query: 292 ASTSVGLVLLAIQLKSKKN 310
           A TS GLVLL IQLKS+KN
Sbjct: 293 ALTSGGLVLLGIQLKSEKN 311