Miyakogusa Predicted Gene
- Lj5g3v1303370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1303370.1 Non Characterized Hit- tr|I1NIL0|I1NIL0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53816 PE,86.11,0,SAP
domain,NULL; SAP,DNA-binding SAP; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; PPR,CUFF.55135.1
(893 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g079525.1 | plastid transcriptionally active protein | HC ... 1358 0.0
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 77 8e-14
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 1e-12
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 71 5e-12
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 6e-12
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 9e-11
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 66 2e-10
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 66 2e-10
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 66 2e-10
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 66 2e-10
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 66 2e-10
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 66 2e-10
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 3e-10
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 6e-10
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 1e-09
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 62 2e-09
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 62 3e-09
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 62 3e-09
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 6e-09
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 60 7e-09
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 7e-09
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 60 8e-09
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 60 8e-09
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 60 1e-08
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 59 2e-08
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 58 4e-08
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 58 4e-08
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 58 4e-08
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 58 4e-08
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 58 4e-08
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 58 4e-08
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 4e-08
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 58 4e-08
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 6e-08
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 57 7e-08
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 57 7e-08
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 8e-08
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-07
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-07
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 56 1e-07
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 1e-07
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 2e-07
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 56 2e-07
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 56 2e-07
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 56 2e-07
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 56 2e-07
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 56 2e-07
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 3e-07
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 55 3e-07
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 55 3e-07
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 55 3e-07
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 55 3e-07
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 55 3e-07
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 55 4e-07
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 55 4e-07
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 54 5e-07
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 54 6e-07
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 54 7e-07
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 54 7e-07
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 54 7e-07
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 7e-07
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 7e-07
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 8e-07
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 8e-07
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 54 8e-07
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 8e-07
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 54 9e-07
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 54 1e-06
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 53 1e-06
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 53 1e-06
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 1e-06
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 53 1e-06
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 2e-06
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 2e-06
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 2e-06
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 52 2e-06
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 2e-06
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 52 2e-06
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 52 3e-06
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 3e-06
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 52 3e-06
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 52 3e-06
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 3e-06
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 52 3e-06
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 4e-06
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 52 4e-06
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 5e-06
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 51 5e-06
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 51 6e-06
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 51 6e-06
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 50 7e-06
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 8e-06
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 8e-06
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 9e-06
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 50 9e-06
>Medtr1g079525.1 | plastid transcriptionally active protein | HC |
chr1:35351898-35342752 | 20130731
Length = 884
Score = 1358 bits (3516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/870 (77%), Positives = 729/870 (83%), Gaps = 5/870 (0%)
Query: 19 TRVPFKLNRSSPRTITVRAAAVSAPAEKRTRKKKQPKDDDTALENGLRFSFMEELMNRAR 78
T +PFKLNR +PRT VRAA +S+P EKRTRKKKQ KDDDT LEN LRFSFMEELMNRAR
Sbjct: 10 TYIPFKLNRLTPRTGPVRAA-LSSP-EKRTRKKKQVKDDDTLLENSLRFSFMEELMNRAR 67
Query: 79 NRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHET 138
NRDS VS+++YDMIAAGL+PGPRSFHGLVVSYALNG+EQAAMDSLRRELGAGLRP+HET
Sbjct: 68 NRDSTGVSQVMYDMIAAGLSPGPRSFHGLVVSYALNGNEQAAMDSLRRELGAGLRPIHET 127
Query: 139 FVALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSK 198
FVALVRLFGSKG +TRGLEIL AME LNYDIR AW+ILIEELVRNK+LEDANKVF+KG+K
Sbjct: 128 FVALVRLFGSKGHSTRGLEILGAMENLNYDIRHAWIILIEELVRNKHLEDANKVFLKGAK 187
Query: 199 GGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEV 258
GGLRAT+E+YDLLIEEDCK GDHSNAL+ISYEMEAAGRMATTFHFNCLLSVQATCGIPE+
Sbjct: 188 GGLRATDELYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEI 247
Query: 259 AFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVK 318
AF TFENMEYGED+MKPDTETYNWVIQAYTRA+SYDRVQDVAELLGMMVED+KR+QPNVK
Sbjct: 248 AFTTFENMEYGEDYMKPDTETYNWVIQAYTRADSYDRVQDVAELLGMMVEDHKRVQPNVK 307
Query: 319 THALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVE 378
THALLVECFTKYCVVREAIRHFRAL NFEGG K LH GN+GDPLSLYLRALCREGRI++
Sbjct: 308 THALLVECFTKYCVVREAIRHFRALKNFEGGTKILHMDGNHGDPLSLYLRALCREGRIID 367
Query: 379 LLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYVEEGGLT 438
+LEALEAMA DN IPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYVEEGGLT
Sbjct: 368 MLEALEAMANDNQQIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYVEEGGLT 427
Query: 439 GERKRWVPRSGKTPLDPDCDGFIYSNPMETSFKQRCXXXXXXXXXXXXXXXQFEGLAALG 498
GERKRWVPRSGKTPLDPD DGFIYSNPMETSFKQRC ++EG+ ALG
Sbjct: 428 GERKRWVPRSGKTPLDPDADGFIYSNPMETSFKQRCLEEKKVYHKKLLKKLRYEGIVALG 487
Query: 499 DGVSESDYIRVLERLKKLIKGPEQNVLKPKAASKMVVSELKEELEAQGLPIDGTRNVLYQ 558
DG SESDY+RV+E LKK+IKGPEQN LKPKAASKM+V+ELKEELEAQGLPIDGTRNVLYQ
Sbjct: 488 DGASESDYVRVIEWLKKIIKGPEQNALKPKAASKMLVNELKEELEAQGLPIDGTRNVLYQ 547
Query: 559 RVQKARRINQSRGRPLWXXXXXXXXXXXXXXLDALISRVKLEEGNTEFWKRRFLGEGLTS 618
RVQKARRINQSRGRPLW L+ALISR+KLEEGNTE+WKRRFLGEGL
Sbjct: 548 RVQKARRINQSRGRPLWVPPIEVEEEEVDEELEALISRIKLEEGNTEYWKRRFLGEGLNG 607
Query: 619 DHGKPMDAGTSESPXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 677
D+G MD G SESP R
Sbjct: 608 DNGNAMDEGESESPDVQDYIDVVGDDAKEAEDDEADEDEEEEVEQIEEEIAQVENQDVER 667
Query: 678 VKDKEVEAKKPLQMIGVQLLKDSNQPTATSKKYKRRSRV--QAENXXXXXWFPLDIFEAF 735
+K+KEVE+KKPLQMIGVQLLKD N+P+AT KK RR ++ WFPLDIFEAF
Sbjct: 668 IKEKEVESKKPLQMIGVQLLKDFNEPSATFKKSSRRRSRRNMVDDDADDDWFPLDIFEAF 727
Query: 736 EEMRKRKVFDVSDMYTLADAWGWTWERELKNKPPRRWSQEREVELAIKVMQKVIELGGAP 795
+EMR R+VFDVSDMYTLADAWGWTWE+ELKN+PP RWSQE EV+LAIKVMQKVI+LGG P
Sbjct: 728 KEMRNRRVFDVSDMYTLADAWGWTWEKELKNRPPHRWSQEWEVDLAIKVMQKVIQLGGTP 787
Query: 796 TIGDCAVILRAAIRAPLPSAFLTILQTTHGLGYKFGRPLYDEVISLCVDIGELDXXXXXX 855
TIGDCAVILRAAI APLPSAFLTILQTTHGLGYKFGRPLYDEVISLC+D+GELD
Sbjct: 788 TIGDCAVILRAAISAPLPSAFLTILQTTHGLGYKFGRPLYDEVISLCLDLGELDAAVAVV 847
Query: 856 XELETTGISVSDQILDRVISAKQKIDDPSS 885
+LETTGI VSDQ LDRVISAKQ ID+PS+
Sbjct: 848 ADLETTGILVSDQTLDRVISAKQGIDNPSN 877
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 15/262 (5%)
Query: 73 LMNRARNRDSAAVSELIYD-MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAG 131
L+N N+ + + ++D MI G+ P + L+ + GD A L+ +G
Sbjct: 129 LLNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESG 188
Query: 132 LRPVHETFVALVRLFGSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDA 189
+ P T+V L+ + G+ R EI + M + L+ D+ + IL++ L + LE A
Sbjct: 189 VEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDV-VTFAILVDVLCKVGDLEAA 247
Query: 190 NKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSV 249
F+ K G+ +Y+ LI+ CK GD A+ + EME G F C + V
Sbjct: 248 RNCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDV--FTCSILV 305
Query: 250 QATC--GIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMV 307
+ C G E A E ME F + TYN VI Y + ++ E+ M
Sbjct: 306 KGLCDSGRFEEAKNLMEEMEKAGVF--ANAVTYNAVIDGYCKMGDMEK---AIEVCSQMT 360
Query: 308 EDYKRIQPNVKTHALLVECFTK 329
E ++I+PNV T + L++ F K
Sbjct: 361 E--RKIEPNVITFSTLIDGFCK 380
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 31/316 (9%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +MI+ G++P ++ L+ + + G A+D + + ++P TF LV F
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 147 GSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKG 199
G G + M K + Y+ L++E+ NK A +F ++G
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV--NK----AKSIFNTMAQG 359
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
G+ + Y ++I CK+ A+++ EM + ++ L+ + G A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
+ M + + P TYN ++ A + D+ A L ++D K IQPN+ T
Sbjct: 420 LQLVDQMH--DRGVPPTIRTYNSILDALCKIHQVDK----AIALLTKLKD-KGIQPNMYT 472
Query: 320 HALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYG-DPLSLYLRALCREGRIVE 378
+++L++ + + +A + F L L G N D ++ ++ C EG E
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEGL---------LVKGHNLNVDTYTIMIQGFCVEGLFNE 523
Query: 379 LLEALEAMAKDNHPIP 394
L L M +DN IP
Sbjct: 524 ALALLSKM-EDNGCIP 538
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 137/336 (40%), Gaps = 37/336 (11%)
Query: 82 SAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVA 141
+A L+ ++ +G P +F+ ++ + +NG A+D + L G T+
Sbjct: 106 TAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGT 165
Query: 142 LVRLFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGG 200
L+ G L +L MEK + + LI+ L ++ ++ DA + + + G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 201 LRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG-IPEVA 259
+ Y+ LI+ C VG + +M + FN L+ G I E
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
+ GE KPD TYN +++ Y E+ V + EL MV+ + ++P+V
Sbjct: 286 GVLAMMSKRGE---KPDIVTYNALMEGYCSREN---VHEARELFNRMVK--RGLEPDVLN 337
Query: 320 HALLVECFTKYCVVREAIRHFRALIN---------FEGGIKALHNGGNYGD--------- 361
+ +L++ + K +V EA+ F+ L N + I L N G
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397
Query: 362 ---------PLSLYLRALCREGRIVELLEALEAMAK 388
++ + ALC+EGRI+E L L M K
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 137/336 (40%), Gaps = 37/336 (11%)
Query: 82 SAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVA 141
+A L+ ++ +G P +F+ ++ + +NG A+D + L G T+
Sbjct: 106 TAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGT 165
Query: 142 LVRLFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGG 200
L+ G L +L MEK + + LI+ L ++ ++ DA + + + G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 201 LRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG-IPEVA 259
+ Y+ LI+ C VG + +M + FN L+ G I E
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
+ GE KPD TYN +++ Y E+ V + EL MV+ + ++P+V
Sbjct: 286 GVLAMMSKRGE---KPDIVTYNALMEGYCSREN---VHEARELFNRMVK--RGLEPDVLN 337
Query: 320 HALLVECFTKYCVVREAIRHFRALIN---------FEGGIKALHNGGNYGD--------- 361
+ +L++ + K +V EA+ F+ L N + I L N G
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397
Query: 362 ---------PLSLYLRALCREGRIVELLEALEAMAK 388
++ + ALC+EGRI+E L L M K
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 132/330 (40%), Gaps = 32/330 (9%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L+ +M G++ +H ++ Y + G+E+ + R G P ++ L+ L+
Sbjct: 430 LVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFERLKECGFSPSIVSYGCLINLYT 489
Query: 148 SKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
G ++ LEI M+ + + + +L V+ K +A VF +K GL+
Sbjct: 490 KIGKVSKALEISRVMKTVGIKHNMKTYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVI 549
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
+Y+ +++ C +G+ A+ I +M+ ATT F ++ A G A F+ M
Sbjct: 550 LYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLPIIHGFARAGETRRALEIFDTM 609
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVEC 326
P TYN +I ++ + + + + + PN T+ L++
Sbjct: 610 R--RSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNL-----AGVSPNEHTYTTLMQG 662
Query: 327 FTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLY-----LRALCREGRIVELLE 381
+ +A ++F L N G + +Y L+A C+ GR+ L
Sbjct: 663 YASLGDTEKAFQYFTIL-------------KNDGLEIDVYTYEALLKACCKSGRMQSALA 709
Query: 382 ALEAMAKDNHPIPPRAMILSRKYRTLVSSW 411
+ M+ + IP + Y L+ W
Sbjct: 710 VTKEMS--SKKIPRNTFV----YNILIDGW 733
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 9/213 (4%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+++ +M AG++P ++ L+ YA GD + A GL T+ AL++
Sbjct: 639 QILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKAC 698
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQAWL--ILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
G L + M R ++ ILI+ R + +A + + K G++
Sbjct: 699 CKSGRMQSALAVTKEMSSKKIP-RNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPD 757
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
Y I CK GD NA + EMEA G + L+ A PE A FE
Sbjct: 758 IHTYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLIHGWARAAFPEKALKCFE 817
Query: 265 NMEYGEDFMKPDTETYNWVIQAY----TRAESY 293
+++ +KPD Y+ ++ + T A+SY
Sbjct: 818 DLKVAG--LKPDRAVYHCLMTSLLSRATIAQSY 848
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 14/246 (5%)
Query: 102 RSFHGLVVSYALNGDEQAAM---DSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEI 158
R+F ++ +A G+ + A+ D++RR +G P T+ AL+ K + L+I
Sbjct: 584 RTFLPIIHGFARAGETRRALEIFDTMRR---SGCIPTVHTYNALILGLVEKCQMEKALQI 640
Query: 159 LAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCK 217
L M + + L++ E A + F GL Y+ L++ CK
Sbjct: 641 LDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCK 700
Query: 218 VGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDT 277
G +AL ++ EM + TF +N L+ A G A + M ++ ++PD
Sbjct: 701 SGRMQSALAVTKEMSSKKIPRNTFVYNILIDGWARRGDVWEAADLMQQMR--KEGVQPDI 758
Query: 278 ETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAI 337
TY I A +A +Q+ +++ M + + I+PN+KT+ L+ + + +A+
Sbjct: 759 HTYTSFINACCKAGD---MQNATQVIKEM--EARGIKPNLKTYTTLIHGWARAAFPEKAL 813
Query: 338 RHFRAL 343
+ F L
Sbjct: 814 KCFEDL 819
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 56/350 (16%)
Query: 98 NPGPRSFHGLVVSYALNGDEQAAMDSLRRELG-AGLRPVHETFVALVRLFGSKGSATRGL 156
NP ++ L+ Y ++G + A D L + + AG P TF ++ KG L
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 157 EILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEED 215
E L M K ++ + ILI+ + + E+A+KV S GL Y+ LI
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 216 CKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKP 275
CK G +AL + EM + G + FN L+ E A + +M + +
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL--EGVIA 510
Query: 276 DTETYNWVIQAYTRAE----------------------SYD-------RVQDVAELLGMM 306
+T TYN +I A+ R E +Y+ + + LG++
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570
Query: 307 VEDY-KRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIK---ALHNGGNYGDP 362
+ + + I P++ + +L+ F + V +A++ R +I + G+ +N
Sbjct: 571 EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI--QRGLTPDIVTYNS------ 622
Query: 363 LSLYLRALCREGRIVELLEALEAM-AKDNHPIPPRAMILSRKYRTLVSSW 411
+ LC+ GR E L + AK HP + Y TL+S +
Sbjct: 623 ---LINGLCKMGRFQEALNLFNGLQAKGIHPD-------AVTYNTLISRY 662
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 56/350 (16%)
Query: 98 NPGPRSFHGLVVSYALNGDEQAAMDSLRRELG-AGLRPVHETFVALVRLFGSKGSATRGL 156
NP ++ L+ Y ++G + A D L + + AG P TF ++ KG L
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 157 EILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEED 215
E L M K ++ + ILI+ + + E+A+KV S GL Y+ LI
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 216 CKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKP 275
CK G +AL + EM + G + FN L+ E A + +M + +
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL--EGVIA 510
Query: 276 DTETYNWVIQAYTRAE----------------------SYD-------RVQDVAELLGMM 306
+T TYN +I A+ R E +Y+ + + LG++
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570
Query: 307 VEDY-KRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIK---ALHNGGNYGDP 362
+ + + I P++ + +L+ F + V +A++ R +I + G+ +N
Sbjct: 571 EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI--QRGLTPDIVTYNS------ 622
Query: 363 LSLYLRALCREGRIVELLEALEAM-AKDNHPIPPRAMILSRKYRTLVSSW 411
+ LC+ GR E L + AK HP + Y TL+S +
Sbjct: 623 ---LINGLCKMGRFQEALNLFNGLQAKGIHPD-------AVTYNTLISRY 662
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 56/350 (16%)
Query: 98 NPGPRSFHGLVVSYALNGDEQAAMDSLRRELG-AGLRPVHETFVALVRLFGSKGSATRGL 156
NP ++ L+ Y ++G + A D L + + AG P TF ++ KG L
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 157 EILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEED 215
E L M K ++ + ILI+ + + E+A+KV S GL Y+ LI
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 216 CKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKP 275
CK G +AL + EM + G + FN L+ E A + +M + +
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL--EGVIA 510
Query: 276 DTETYNWVIQAYTRAE----------------------SYD-------RVQDVAELLGMM 306
+T TYN +I A+ R E +Y+ + + LG++
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570
Query: 307 VEDY-KRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIK---ALHNGGNYGDP 362
+ + + I P++ + +L+ F + V +A++ R +I + G+ +N
Sbjct: 571 EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI--QRGLTPDIVTYNS------ 622
Query: 363 LSLYLRALCREGRIVELLEALEAM-AKDNHPIPPRAMILSRKYRTLVSSW 411
+ LC+ GR E L + AK HP + Y TL+S +
Sbjct: 623 ---LINGLCKMGRFQEALNLFNGLQAKGIHPD-------AVTYNTLISRY 662
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 56/350 (16%)
Query: 98 NPGPRSFHGLVVSYALNGDEQAAMDSLRRELG-AGLRPVHETFVALVRLFGSKGSATRGL 156
NP ++ L+ Y ++G + A D L + + AG P TF ++ KG L
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 157 EILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEED 215
E L M K ++ + ILI+ + + E+A+KV S GL Y+ LI
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 216 CKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKP 275
CK G +AL + EM + G + FN L+ E A + +M + +
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL--EGVIA 510
Query: 276 DTETYNWVIQAYTRAE----------------------SYD-------RVQDVAELLGMM 306
+T TYN +I A+ R E +Y+ + + LG++
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570
Query: 307 VEDY-KRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIK---ALHNGGNYGDP 362
+ + + I P++ + +L+ F + V +A++ R +I + G+ +N
Sbjct: 571 EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI--QRGLTPDIVTYNS------ 622
Query: 363 LSLYLRALCREGRIVELLEALEAM-AKDNHPIPPRAMILSRKYRTLVSSW 411
+ LC+ GR E L + AK HP + Y TL+S +
Sbjct: 623 ---LINGLCKMGRFQEALNLFNGLQAKGIHPD-------AVTYNTLISRY 662
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 56/350 (16%)
Query: 98 NPGPRSFHGLVVSYALNGDEQAAMDSLRRELG-AGLRPVHETFVALVRLFGSKGSATRGL 156
NP ++ L+ Y ++G + A D L + + AG P TF ++ KG L
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 157 EILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEED 215
E L M K ++ + ILI+ + + E+A+KV S GL Y+ LI
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 216 CKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKP 275
CK G +AL + EM + G + FN L+ E A + +M + +
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL--EGVIA 510
Query: 276 DTETYNWVIQAYTRAE----------------------SYD-------RVQDVAELLGMM 306
+T TYN +I A+ R E +Y+ + + LG++
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570
Query: 307 VEDY-KRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIK---ALHNGGNYGDP 362
+ + + I P++ + +L+ F + V +A++ R +I + G+ +N
Sbjct: 571 EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI--QRGLTPDIVTYNS------ 622
Query: 363 LSLYLRALCREGRIVELLEALEAM-AKDNHPIPPRAMILSRKYRTLVSSW 411
+ LC+ GR E L + AK HP + Y TL+S +
Sbjct: 623 ---LINGLCKMGRFQEALNLFNGLQAKGIHPD-------AVTYNTLISRY 662
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 139/350 (39%), Gaps = 56/350 (16%)
Query: 98 NPGPRSFHGLVVSYALNGDEQAAMDSLRRELG-AGLRPVHETFVALVRLFGSKGSATRGL 156
NP ++ L+ Y ++G + A D L + + AG P TF ++ KG L
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 157 EILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEED 215
E L M K ++ + ILI+ + + E+A+KV S GL Y+ LI
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 216 CKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKP 275
CK G +AL + EM + G + FN L+ E A + +M + +
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL--EGVIA 510
Query: 276 DTETYNWVIQAYTRAESYDRVQDVA-----------------------------ELLGMM 306
+T TYN +I A+ R E + + + LG++
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570
Query: 307 VEDY-KRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIK---ALHNGGNYGDP 362
+ + + I P++ + +L+ F + V +A++ R +I + G+ +N
Sbjct: 571 EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI--QRGLTPDIVTYNS------ 622
Query: 363 LSLYLRALCREGRIVELLEALEAM-AKDNHPIPPRAMILSRKYRTLVSSW 411
+ LC+ GR E L + AK HP + Y TL+S +
Sbjct: 623 ---LINGLCKMGRFQEALNLFNGLQAKGIHPD-------AVTYNTLISRY 662
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 136/315 (43%), Gaps = 29/315 (9%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M++ G++P ++ L+ + + G + A+D + + ++P TF LV F
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 147 GSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKG 199
G G + M K + Y+ L++E+ NK A +F ++G
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV--NK----AKSIFNTMAQG 359
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
G+ + Y ++I CK+ A+++ EM + ++ L+ + G A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
+ M + + P+ TYN ++ A + D+ A L +D K QP++ T
Sbjct: 420 LQLVDQMH--DRGVPPNICTYNSILDALCKTHQVDK----AIALLTKFKD-KGFQPDIST 472
Query: 320 HALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVEL 379
+++L++ + + +A + F L+ +K +N Y ++ ++ C EG E
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEDLL-----VKG-YNLDVYA--YTIMIQGFCVEGLFNEA 524
Query: 380 LEALEAMAKDNHPIP 394
L L M +DN IP
Sbjct: 525 LALLSKM-EDNGCIP 538
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 147/340 (43%), Gaps = 19/340 (5%)
Query: 56 DDDTALENGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNG 115
D + N + +S + + M + ++ + A +L +M++ G++P ++ L+ + G
Sbjct: 216 DGNLVQPNVVMYSTIIDGMCKDKHVNDAF--DLYSEMVSKGISPNVVTYSALISGFFTVG 273
Query: 116 DEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQA-WL 174
+ A+D + + ++P TF LV F G G + A M K +
Sbjct: 274 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 333
Query: 175 ILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAA 234
L++ K + A + S+ G+ + Y++LI+ CK+ A+++ EM
Sbjct: 334 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 393
Query: 235 GRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYD 294
+ +N L + C + ++++A E + + PD TY+ ++ A + D
Sbjct: 394 HIIPDVVTYNSL--IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVD 451
Query: 295 RVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALH 354
+ A L ++D + I+PN+ T+ +L++ K + +A F L+ +K +
Sbjct: 452 K----AIALLTKLKD-QGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL-----VKGYN 501
Query: 355 NGGNYGDPLSLYLRALCREGRIVELLEALEAMAKDNHPIP 394
N ++ + C +G E L L M KDN IP
Sbjct: 502 ITVN---TYTVMIHGFCNKGLFDEALTLLSKM-KDNSCIP 537
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 13/246 (5%)
Query: 96 GLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRG 155
GL P +F+ L+ + GD A +++ + G+ P ET+ +L+ +G R
Sbjct: 387 GLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRC 446
Query: 156 LEILAAMEKLNYDIR---QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLI 212
EI +E N ++ +++ LI L ++ L DA V G+ +IY++LI
Sbjct: 447 FEIFEEIE--NKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLI 504
Query: 213 EEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDF 272
E C + +A EM G AT +N L++ G A F +M
Sbjct: 505 EASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMT--RKG 562
Query: 273 MKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT-HALLVECFTKYC 331
KPD TYN ++ Y + + ++ EL M + + I+P++ T H L+ C K
Sbjct: 563 YKPDVITYNSLMSVYAMSGNPEK---CLELYDNMKK--RGIKPSIGTFHPLINSCRKKGV 617
Query: 332 VVREAI 337
V E +
Sbjct: 618 VTMEKM 623
>Medtr1g112240.1 | PPR containing plant-like protein | HC |
chr1:50767348-50763755 | 20130731
Length = 559
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 133/310 (42%), Gaps = 20/310 (6%)
Query: 91 DMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKG 150
+M++ P ++ LV ++A G + A + + AGL P + AL+ + G
Sbjct: 267 EMLSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQMQEAGLEPDVYAYNALMEAYSRAG 326
Query: 151 SATRGLEILAAMEKLNYDI-RQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
EI + M+ + + R ++ IL++ + + +DA VF + G+ T + +
Sbjct: 327 FPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFENMKRVGITPTMKSHM 386
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
+L+ K+G+ + DI +M +G TF N +L++ G ME G
Sbjct: 387 VLLSAYSKMGNVTKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEKG 446
Query: 270 EDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
+ D T+N +I Y +A +++++ +LL K ++P+V T + ++K
Sbjct: 447 SYVV--DISTFNILIHRYGQAGFIEKMEEQFQLLLT-----KGLKPDVVTWTSRIGAYSK 499
Query: 330 YCVVREAIRHFRALINFEGGIKALHNGGNY--GDPLSLYLRALCREGRIVELLEALEAMA 387
+ + + F +I + G Y G + L A E +I ++ + M
Sbjct: 500 KKLYLKCLEIFEEMI----------DAGCYPDGGTAKVLLAACSNEDQIEQVTSVIRTMH 549
Query: 388 KDNHPIPPRA 397
KD + P A
Sbjct: 550 KDMKTVLPVA 559
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 20/265 (7%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
+ ++ D + G P ++ LV + +GD AM + LG GLRP + L+
Sbjct: 341 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLI-- 398
Query: 146 FGSKGSATRGLEILAAMEKLNYDIRQA-------WLILIEELVRNKYLEDANKVFMKGSK 198
KG +GL IL A++ +N + + ++I L + L DAN +
Sbjct: 399 ---KGLCQQGL-ILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 454
Query: 199 GGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEV 258
G Y+ L++ C+ +A+++ M + G +N LL+ E
Sbjct: 455 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 514
Query: 259 AFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVK 318
F+ M E P+ TYN +I++ ++ +V + +LLG M K + P+V
Sbjct: 515 VMEIFKAMT--EKGCAPNIITYNTIIESLCNSK---KVNEAVDLLGEMKS--KGLTPDVV 567
Query: 319 THALLVECFTKYCVVREAIRHFRAL 343
+ L+ F K + A FR +
Sbjct: 568 SFGTLITGFCKVGDLDGAYGLFRGM 592
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
E++ M+ GL P +++GLV Y GD + LR G+ T L+R +
Sbjct: 247 EVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGY 306
Query: 147 GSKGSATRGLEILAAMEK---LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
KG ++L +E+ L D R + +L++ + +EDA ++ + + GL+
Sbjct: 307 CKKGKMDEAEKLLREVEEDELLVVDER-VYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKV 365
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
I + LI+ CK+G A + M + +N LL G AF
Sbjct: 366 NMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLC 425
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
E M D + P TYN VI+ SYD D L +MVE + + PN + +
Sbjct: 426 EEML--GDGITPTVVTYNTVIKGLVDVGSYD---DALHLWHLMVE--RGVTPNEISCCTM 478
Query: 324 VECFTK 329
++CF K
Sbjct: 479 LDCFFK 484
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 10/260 (3%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M++ G++P ++ L+ + + G A+ + + + P TF LV F
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF 276
Query: 147 GSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
+G +LA M K + D+ + L++ K + A +F ++GG+ A
Sbjct: 277 CKEGRVKEAKNVLAMMMKQGIKPDVV-TYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTAN 335
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
+ Y+++I CK+ A+++ EM + +N L + C ++++A
Sbjct: 336 VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL--IDGLCKSGKISYALKL 393
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
E + + D TYN ++ A + D+ +A L M E IQP++ T+ +L+
Sbjct: 394 VDEMHDRGVPHDKITYNSILDALCKNHQVDKA--IALLTKMKDEG---IQPDMYTYTILI 448
Query: 325 ECFTKYCVVREAIRHFRALI 344
+ K +++A F L+
Sbjct: 449 DGLCKGGRLKDAQNIFEDLL 468
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 10/259 (3%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L+ +M+ G++P S+ ++ + G+ + ++ R G RP +TF +L++ F
Sbjct: 265 DLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGF 324
Query: 147 GSKGSA--TRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
+G GL L E ++ ++ A+ LI L + +++A V+ + K +R
Sbjct: 325 FVRGRVGDAVGLWNLMIREGVSPNV-VAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPN 383
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
Y +I K GD +A + +M G + C++ V + + AF +
Sbjct: 384 VTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLID 443
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
NM D P T+N I+ RA RV+ +L M E Y+ + PN++T+ L+
Sbjct: 444 NMI--SDGCPPTVITFNNFIKGLCRA---GRVEWAMNVLDQM-EKYECL-PNIRTYNELL 496
Query: 325 ECFTKYCVVREAIRHFRAL 343
+ + REA R L
Sbjct: 497 DGLFRANAFREACGLIREL 515
>Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:55951491-55948959 | 20130731
Length = 706
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 7/252 (2%)
Query: 96 GLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRG 155
G P ++ ++ SY GD A++ R R TF L++++G G+
Sbjct: 246 GCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGC 305
Query: 156 LEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEE 214
L + M+ L + L++ + R K A ++ + + Y L+
Sbjct: 306 LNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHA 365
Query: 215 DCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMK 274
+ +AL + EM T +N LL++ A G ++AF FE+M+ D
Sbjct: 366 YGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDMK-SSDTCS 424
Query: 275 PDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVR 334
PD+ T++ +I Y+ + RV + ++ M+E +P + LV+C+ K
Sbjct: 425 PDSWTFSSLITIYSCS---GRVSEAERMMNEMIE--SGFEPTIFVLTSLVQCYGKAKRTD 479
Query: 335 EAIRHFRALINF 346
+ ++ F L++
Sbjct: 480 DVVKTFNQLLDM 491
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 14/284 (4%)
Query: 65 LRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSL 124
+ +S + + + R+ DS + +L ++ + + + +++ ++ GD AM L
Sbjct: 210 INYSSIIKSLTRSNRIDSPILQKLYAEIESDKIEADGHLLNDIILGFSKAGDATRAMHFL 269
Query: 125 RRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRN 183
G GL P T A++ G+ G + +++ + R +A+ L++ V+
Sbjct: 270 AVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLKGYVKT 329
Query: 184 KYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHF 243
L+DA V + K G+ Y LL++ G +A + EMEA+ +F +
Sbjct: 330 GSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIY 389
Query: 244 NCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELL 303
+ +L+ G + +F + M+ ++PD YN +I + + D +A
Sbjct: 390 SRILASYRDKGEWQKSFQVLKEMKMSG--VQPDRHFYNVMIDTFGKYNCLDHA--MATFE 445
Query: 304 GMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFE 347
M+ E I+P+ T L++C K + RH RA FE
Sbjct: 446 RMLSEG---IRPDTVTWNTLIDCHCK------SGRHSRAEELFE 480
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 109/257 (42%), Gaps = 8/257 (3%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
++ +M +G+ P ++ LV +YA G ++A L+ + L+P + ++ +
Sbjct: 338 VVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYR 397
Query: 148 SKGSATRGLEILAAMEKLNYDI-RQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
KG + ++L M+ R + ++I+ + L+ A F + G+R
Sbjct: 398 DKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTV 457
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
++ LI+ CK G HS A ++ EM+ +G +N +++ E M
Sbjct: 458 TWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKM 517
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVEC 326
+ + P+ TY ++ Y ++ ++ + E+L M +P + L+
Sbjct: 518 Q--SQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSM-----GFKPTSTMYNALINA 570
Query: 327 FTKYCVVREAIRHFRAL 343
+ + + +A+ FR +
Sbjct: 571 YAQRGLSDQAVNAFRMM 587
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 14/284 (4%)
Query: 65 LRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSL 124
+ +S + + + R+ DS + +L ++ + + + +++ ++ GD AM L
Sbjct: 210 INYSSIIKSLTRSNRIDSPILQKLYAEIESDKIEADGHLLNDIILGFSKAGDATRAMHFL 269
Query: 125 RRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRN 183
G GL P T A++ G+ G + +++ + R +A+ L++ V+
Sbjct: 270 AVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLKGYVKT 329
Query: 184 KYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHF 243
L+DA V + K G+ Y LL++ G +A + EMEA+ +F +
Sbjct: 330 GSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIY 389
Query: 244 NCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELL 303
+ +L+ G + +F + M+ ++PD YN +I + + D +A
Sbjct: 390 SRILASYRDKGEWQKSFQVLKEMKMSG--VQPDRHFYNVMIDTFGKYNCLDHA--MATFE 445
Query: 304 GMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFE 347
M+ E I+P+ T L++C K + RH RA FE
Sbjct: 446 RMLSEG---IRPDTVTWNTLIDCHCK------SGRHSRAEELFE 480
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 109/257 (42%), Gaps = 8/257 (3%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
++ +M +G+ P ++ LV +YA G ++A L+ + L+P + ++ +
Sbjct: 338 VVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYR 397
Query: 148 SKGSATRGLEILAAMEKLNYDI-RQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
KG + ++L M+ R + ++I+ + L+ A F + G+R
Sbjct: 398 DKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTV 457
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
++ LI+ CK G HS A ++ EM+ +G +N +++ E M
Sbjct: 458 TWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKM 517
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVEC 326
+ + P+ TY ++ Y ++ ++ + E+L M +P + L+
Sbjct: 518 Q--SQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSM-----GFKPTSTMYNALINA 570
Query: 327 FTKYCVVREAIRHFRAL 343
+ + + +A+ FR +
Sbjct: 571 YAQRGLSDQAVNAFRMM 587
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 126/315 (40%), Gaps = 44/315 (13%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M++ G++P ++ L+ + + G + A+D + + ++P TF LV F
Sbjct: 224 DLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGF 283
Query: 147 GSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKG 199
G + A M K + Y+ L++E + A +F ++G
Sbjct: 284 CKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKE------VNTAKSIFNTMAQG 337
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
G+ Y++LI CK+ A+++ EM + +N L+ + G A
Sbjct: 338 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 397
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
+ M + + P+ TYN +I A + D+ A L +D + IQP++ T
Sbjct: 398 LQLVDQMH--DRGVPPNILTYNSIIDALFKTHQVDK----AIALITKFKD-QGIQPSMYT 450
Query: 320 HALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVEL 379
+ +L++ K + + +N ++ + C++G E
Sbjct: 451 YTILIDGLCK-------VEGYDITVN----------------TYNVMIHGFCKKGLFDEA 487
Query: 380 LEALEAMAKDNHPIP 394
L L M KD+ IP
Sbjct: 488 LSLLSKM-KDSSCIP 501
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 142/354 (40%), Gaps = 47/354 (13%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
M++ +NP +F+ LV + G + A L + AG++ T+ L+R F G
Sbjct: 269 MVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGK 328
Query: 152 ATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
+++ M K+N ++ + IL++ + + ++ AN V + + Y
Sbjct: 329 LKEAVDLFNKMILGKVNPNV-YTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYS 387
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
L+ C V + + A I M G + ++S + + A FE M+
Sbjct: 388 CLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSK 447
Query: 270 EDFMKPDTETYNWVIQAYTRA-----------ESYDRVQ-----DVAELLGMMVEDY--- 310
+ F PD TY+ ++ ++ E +DR Q + +L +++ +
Sbjct: 448 QIF--PDVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVE 505
Query: 311 -----------KRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNY 359
K IQPNV T+ + ++ K + +A F L+ HN Y
Sbjct: 506 EAIELFKEFKDKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDLLVNSYN----HNRNKY 561
Query: 360 GDPLSLYLRALCREGRIVELLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIE 413
++ + CR+G E L L M KDN IP Y+T++SS ++
Sbjct: 562 --TWTVMIHGFCRKGLFDEALTLLSNM-KDNSCIPDTV-----TYKTIISSLLD 607
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 13/239 (5%)
Query: 89 IYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGS 148
I+D + P +++ L+ + + A + + AG P T+ +V +
Sbjct: 188 IFDSMKGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCK 247
Query: 149 KGSATRGLEILAAMEKLNYDIRQA---WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G +E++ M+ + D R + +L+ +EDA +FM+ K G+ A
Sbjct: 248 AGRVDEAVEVVKEMD--DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADV 305
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
+Y+ LI CK N + EME+ G + N ++S + G + AF+ F
Sbjct: 306 VVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRR 365
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
M +PD +TY +I+ + D + + + K+ P++ T ++L+
Sbjct: 366 M---IKLCEPDADTYTMLIKMFCERNEVDMALKIWKYM-----KSKQFVPSLHTFSVLI 416
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 13/239 (5%)
Query: 89 IYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGS 148
I+D + P +++ L+ + + A + + AG P T+ +V +
Sbjct: 188 IFDSMKGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCK 247
Query: 149 KGSATRGLEILAAMEKLNYDIRQA---WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G +E++ M+ + D R + +L+ +EDA +FM+ K G+ A
Sbjct: 248 AGRVDEAVEVVKEMD--DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADV 305
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
+Y+ LI CK N + EME+ G + N ++S + G + AF+ F
Sbjct: 306 VVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRR 365
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
M +PD +TY +I+ + D + + + K+ P++ T ++L+
Sbjct: 366 M---IKLCEPDADTYTMLIKMFCERNEVDMALKIWKYM-----KSKQFVPSLHTFSVLI 416
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 13/239 (5%)
Query: 89 IYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGS 148
I+D + P +++ L+ + + A + + AG P T+ +V +
Sbjct: 188 IFDSMKGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCK 247
Query: 149 KGSATRGLEILAAMEKLNYDIRQA---WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G +E++ M+ + D R + +L+ +EDA +FM+ K G+ A
Sbjct: 248 AGRVDEAVEVVKEMD--DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADV 305
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
+Y+ LI CK N + EME+ G + N ++S + G + AF+ F
Sbjct: 306 VVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRR 365
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
M +PD +TY +I+ + D + + + K+ P++ T ++L+
Sbjct: 366 M---IKLCEPDADTYTMLIKMFCERNEVDMALKIWKYM-----KSKQFVPSLHTFSVLI 416
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 13/239 (5%)
Query: 89 IYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGS 148
I+D + P +++ L+ + + A + + AG P T+ +V +
Sbjct: 188 IFDSMKGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCK 247
Query: 149 KGSATRGLEILAAMEKLNYDIRQA---WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G +E++ M+ + D R + +L+ +EDA +FM+ K G+ A
Sbjct: 248 AGRVDEAVEVVKEMD--DNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAADV 305
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
+Y+ LI CK N + EME+ G + N ++S + G + AF+ F
Sbjct: 306 VVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRR 365
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
M +PD +TY +I+ + D + + + K+ P++ T ++L+
Sbjct: 366 M---IKLCEPDADTYTMLIKMFCERNEVDMALKIWKYM-----KSKQFVPSLHTFSVLI 416
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 151/373 (40%), Gaps = 49/373 (13%)
Query: 85 VSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELG----AGLRPVHETFV 140
V+ L DMI G+NP +F+ L+ S E A+D R G +P T
Sbjct: 135 VTSLYTDMIQTGVNPETYTFNLLIQSLC----ESNALDHARELFDKMSEKGCQPNKFTVG 190
Query: 141 ALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGG 200
LVR F G + LE + N + R + L+ + ++A K+ + ++ G
Sbjct: 191 ILVRGFCRAGRTKQALEFVDGKMGGNVN-RVVYNTLVSSFCKQDMNDEAEKLVERMTEKG 249
Query: 201 LRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMA----TTFHFNCLLSVQATCGIP 256
L ++ I C+ G A I +M+ G + FN +L G+
Sbjct: 250 LLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMM 309
Query: 257 EVAFATFENMEYGEDFMKPDTETYN-WVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQP 315
E A + E M+ G +F+ E+YN W++ ++ + +L MVE+ I+P
Sbjct: 310 EEARSLVETMKKGGNFV--SLESYNTWLLGLLRNG----KLLEGRSVLDEMVEN--GIEP 361
Query: 316 NVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSL--YLRALCRE 373
N+ ++ ++++ + ++ +A R ++ + G Y D ++ L C +
Sbjct: 362 NIYSYNIVMDGLCRNHMMLDARRLMDLMV----------SNGVYPDTVTYTTLLHGYCSK 411
Query: 374 GRIVELLEAL-EAMAKDNHPIPPRAMILSRKYRTLVSSWIEP--------LQEEAELGYE 424
G++ E L E + K HP L L S W E LQ+ E Y+
Sbjct: 412 GKVFEAKAILNEMIRKGCHPNTYTCNTL------LNSLWKEGRKSEAEEMLQKMNEKSYQ 465
Query: 425 IDYIARYVEEGGL 437
+D + + GL
Sbjct: 466 LDTVTCNIVVNGL 478
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 15/214 (7%)
Query: 172 AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEM 231
+ LI L + LE+A K F++ L + YD + CK G S+AL + +M
Sbjct: 527 TYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDM 586
Query: 232 EAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAE 291
E G T +N L+ + G + + M E + PD TYN +I
Sbjct: 587 ERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMR--ERGIHPDICTYNNMINCLCEG- 643
Query: 292 SYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIK 351
+ +D LL M+ D + PNV + +L++ F K + A F ++ G +
Sbjct: 644 --GKTKDATSLLHEML-DKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKE 700
Query: 352 ALHNGGNYGDPLSLYLRALCREGRIVELLEALEA 385
AL+ SL L G++ + E EA
Sbjct: 701 ALY---------SLMFNELLAGGKLSDAKELFEA 725
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 121/294 (41%), Gaps = 20/294 (6%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
E+ +M + G+ ++ ++ +Y NG Q +++ L + P T+ ++
Sbjct: 159 EVFDEMPSQGVARSVFAYTAVINAYGRNGQFQTSVELLESMKQERVSPSILTYNTVINAC 218
Query: 147 GSKGSATRGLEILAA---MEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
G GL L A E + D+ + L+ ++A VF ++GG+
Sbjct: 219 ARGGLDWEGLLGLFAEMRHEGIQPDVI-TYNTLLSACAHRGLGDEAEMVFRTMNEGGVVP 277
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
Y L+ K+ ++ EME+ G + +N LL A G + + F
Sbjct: 278 DINTYSYLVHTFGKLNKLEKVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVF 337
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
M+ E P++ TY+ ++ Y + YD V+D+ L M V + P+ T+ +L
Sbjct: 338 RQMQ--EAGCVPNSATYSILLNLYGKHGRYDDVRDL--FLEMKVSN---TDPDAGTYNIL 390
Query: 324 VECFTKYCVVREAIRHFRALIN---------FEGGIKALHNGGNYGDPLSLYLR 368
++ F + +E + F +++ +EG I A GG + D + L
Sbjct: 391 IQVFGEGGYFKEVVTLFHDMVDENIEPNMETYEGLIFACGKGGLFEDAKKILLH 444
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 3/216 (1%)
Query: 85 VSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVR 144
VSEL+ +M + G P S++ L+ +YA G + ++ R+ AG P T+ L+
Sbjct: 298 VSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSILLN 357
Query: 145 LFGSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
L+G G ++ M+ N D + ILI+ Y ++ +F +
Sbjct: 358 LYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVDENIEP 417
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
E Y+ LI K G +A I M G + ++ + ++ + E A F
Sbjct: 418 NMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEALVAF 477
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDV 299
M E P ETYN ++ +++R Y V+ +
Sbjct: 478 NTM--NEVGSTPTVETYNSLVCSFSRGGLYKEVEAI 511
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 17/309 (5%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M++ ++P +++ L+ + + G + A+ + + P TF LV F
Sbjct: 63 DLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAF 122
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
+G +LA M K + L++ K + A +F ++GG+
Sbjct: 123 CKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDI 182
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
Y +LI CK+ A+++ EM + +N L + C + ++++A
Sbjct: 183 HSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSL--IDGLCKLGKISYALKLV 240
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
E + + PD TY+ ++ A + D+ A L ++D + I+PN+ T+ +L++
Sbjct: 241 DEMHDRGVPPDIITYSSILDALCKNHQVDK----AIALLTKLKD-QGIRPNMYTYTILID 295
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEA 385
K + +A F L+ +K + N ++ + C +G E L L
Sbjct: 296 GLCKGGRLDDAHNIFEDLL-----VKGYNITVN---TYTVMIHGFCNKGLFDEALALLSK 347
Query: 386 MAKDNHPIP 394
M KDN P
Sbjct: 348 M-KDNSCFP 355
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 140/336 (41%), Gaps = 29/336 (8%)
Query: 61 LENGLRF----SFMEELMNRARNRDSAAVSELIYD-MIAAGLNPGPRSFHGLVVSYALNG 115
LEN L F +F +N + + E+++ M+ G+ +F+ L+ +
Sbjct: 122 LENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAH 181
Query: 116 DEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWL- 174
+ A+ L GL+P TF L++ F +G L++ M + +
Sbjct: 182 QLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVK 241
Query: 175 ILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAA 234
+L+ + +E+A + ++ S+ G ++ L+ C++G+ ++ALDI M
Sbjct: 242 VLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 301
Query: 235 GRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYD 294
G + +N L+S G E A + M E P+T TYN +I A + +
Sbjct: 302 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE--CSPNTVTYNTLISALCKENEIE 359
Query: 295 RVQDVAELLGMMVEDYKRIQPNVKTHALLVE--CFTKYCVVREAIRHFRALINFEGGIKA 352
D+A +L K + P+V T L++ C +K A+ FE
Sbjct: 360 AATDLARILV-----SKGLLPDVCTFNTLIQGLCLSK--------NQDIAMEMFE----E 402
Query: 353 LHNGGNYGDPL--SLYLRALCREGRIVELLEALEAM 386
+ N G D S+ + +LC E R+ E L L+ M
Sbjct: 403 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 438
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 150/355 (42%), Gaps = 31/355 (8%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
E++ MI +P +++ L+ + + +AA D R + GL P TF L++
Sbjct: 328 EILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGL 387
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
+ +E+ M+ + + ILI+ L + L++A + + G
Sbjct: 388 CLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNA 447
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
+Y+ LI+ CK +A +I +ME G ++ +N L + C V A+
Sbjct: 448 VVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL--IDGLCKNKRVEEASQLM 505
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
+ + +KPD TYN ++ + R ++ D+ + + +P++ T+ L+
Sbjct: 506 DQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA-----SNGCEPDIFTYGTLIG 560
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPL--SLYLRALCREG-RIVELLEA 382
+ V A + R+ + +G + H +P+ +L++R +EG R+
Sbjct: 561 GLCRAGRVDVASKLLRS-VQMKGIVLTPH----AYNPVIQALFMRKRTKEGMRLFR---- 611
Query: 383 LEAMAKDNHPIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYVEEGGL 437
E M K + PP A+ +R L + P+QE ID+ +E+G L
Sbjct: 612 -EMMEKSD---PPDALTHKIVFRGLCNGG-GPIQE------AIDFTVEMLEKGIL 655
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 5/213 (2%)
Query: 84 AVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALV 143
A ++L +++ GL P +F+ L+ L+ ++ AM+ G +P T+ L+
Sbjct: 360 AATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILI 419
Query: 144 RLFGSKGSATRGLEILAAMEKLNYDIRQA--WLILIEELVRNKYLEDANKVFMKGSKGGL 201
+ L +L ME R A + LI+ L +++ +EDA ++F + G+
Sbjct: 420 DSLCYERRLKEALMLLKEMESSGC-ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV 478
Query: 202 RATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFA 261
++ Y+ LI+ CK A + +M G F +N LL+ G E A
Sbjct: 479 SRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGD 538
Query: 262 TFENMEYGEDFMKPDTETYNWVIQAYTRAESYD 294
+ M + +PD TY +I RA D
Sbjct: 539 IVQTM--ASNGCEPDIFTYGTLIGGLCRAGRVD 569
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 112/278 (40%), Gaps = 43/278 (15%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M++ ++P ++ L+ + + G + A+D R + + P TF L+ F
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278
Query: 147 GSKGSATRGLEILAAMEKLN-------YD--------IRQ-------------------- 171
+G +LA M K N Y+ ++Q
Sbjct: 279 CKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDV 338
Query: 172 -AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYE 230
++ I+I + K +++A K+F + + Y+ L++ CK G S AL++ E
Sbjct: 339 WSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE 398
Query: 231 MEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRA 290
M G+ + +N +L A C V A + E ++PD TY +I +
Sbjct: 399 MHDRGQPSNIITYNSIL--DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKV 456
Query: 291 ESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFT 328
D Q V E ++V+ Y PN+ T+ L+ F
Sbjct: 457 GRLDDAQKVFE--DLLVKGY---SPNIYTYTSLINGFC 489
>Medtr4g094688.1 | PPR containing plant protein | HC |
chr4:38731040-38725816 | 20130731
Length = 1086
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 7/186 (3%)
Query: 103 SFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM 162
++ ++ + A +G AA + G RP F +LV G G ++I M
Sbjct: 289 TYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIFASLVDSMGKAGRLDSAMKIY--M 346
Query: 163 EKLNYDIR---QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVG 219
E Y R ++ LIE V++ LE A +++ + G R +Y L+IE K G
Sbjct: 347 EMRGYGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKLAGFRPNFGLYTLIIESHAKSG 406
Query: 220 DHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTET 279
A+ +ME AG + T + CLL + A G + A + +M ++P T
Sbjct: 407 KLDIAMSAFSDMEKAGFLPTPSTYACLLEMHAASGQIDHAMKLYNSMTNAG--LRPGLST 464
Query: 280 YNWVIQ 285
Y ++
Sbjct: 465 YTVLLS 470
>Medtr5g045490.1 | PPR containing plant-like protein | HC |
chr5:19957328-19961582 | 20130731
Length = 691
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 12/255 (4%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L +M A G+ P +F+ L+ +Y+ + L GL+P ++ L+ +G
Sbjct: 376 LFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYG 435
Query: 148 -SKGSATRGLEILAAMEKLNYD-IRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
K + + M+K+ ++ +I + + E A VF + G++ +
Sbjct: 436 RQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSI 495
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
E Y L++ +VGD + I M + T FN L+ A G+ A
Sbjct: 496 ETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFMEARDVIS- 554
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
E+G+ ++P TYN +I AY R D ++ +LL M + R++P+ T++ ++
Sbjct: 555 -EFGKIGLQPTVMTYNMLINAYARG-GLD--SNIPQLLKEM--EALRLRPDSITYSTVIY 608
Query: 326 CFTKYCVVREAIRHF 340
F + VR+ R F
Sbjct: 609 AFVR---VRDFKRAF 620
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 17/309 (5%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M++ ++P +++ L+ + + G + A+ + + P TF LV F
Sbjct: 63 DLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAF 122
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
+G +LA M K + L++ K + A +F ++GG+
Sbjct: 123 CKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDI 182
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
Y +LI CK+ A+++ EM + +N L + C ++++A
Sbjct: 183 HSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSL--IDGLCKSGKISYALKLV 240
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
E + + PD TY+ ++ A + D+ +A L + +D + I+PN+ T+ +L++
Sbjct: 241 DEMHDRGVPPDIITYSSILDALCKNHQVDKA--IALLTNL--KD-QGIRPNMYTYTILID 295
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEA 385
K + +A F L+ +K + N ++ + C +G E L L
Sbjct: 296 GLCKGGRLEDAHNIFEDLL-----VKGYNITVN---TYTVMIHGFCNKGLFDEALALLSK 347
Query: 386 MAKDNHPIP 394
M KDN P
Sbjct: 348 M-KDNSCFP 355
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M++ G++P ++ L+ + + G + A+D + + ++P TF LV F
Sbjct: 63 DLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 122
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G G + A M K + L++ K + AN +F ++GG+
Sbjct: 123 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDT 182
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
+ Y+++I CK+ A+++ +M + + L + C ++++A
Sbjct: 183 QSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL--IDGLCKSGKISYALKLV 240
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDR 295
E + + PD TY+ ++ A + D+
Sbjct: 241 DEMHDRGVPPDIITYSSILDALCKNHQVDK 270
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 134/329 (40%), Gaps = 41/329 (12%)
Query: 28 SSPRTITVRAAAVSAPAEKRTRKKKQPKDDDTALENGLRFSFMEELMNRARNRDSAAVSE 87
++ RT+T AV+ + T K P D L F+F+ + ++
Sbjct: 45 NTIRTLTNVNTAVTFFHQMLTLKP-LPNIKDF----NLLFTFI------TKTKNYTTTIS 93
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
LI + +N + + ++ G + A L + GL+P T +V
Sbjct: 94 LIKHAHSFNINADTYTLNIVINCLCHLGHTKFAFSVLSQMFKTGLKPTVVTLNTIVNGLC 153
Query: 148 SKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
+G+ R + + ME Y+ + L+ L + + D M + G +R E
Sbjct: 154 VEGNVARAVCLTREMENAGYEPNGYTFGALVNGLCK---IGD-----MVSAVGCIRDMVE 205
Query: 207 --------IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEV 258
+Y+ +++ CK G S AL + EM G + +NCL +Q C I E
Sbjct: 206 RNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKGVKGSLVTYNCL--IQGVCSIGEW 263
Query: 259 AFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVK 318
A F E E + PD +T+ ++ + + + + ++ MV+ ++PNV
Sbjct: 264 KKAYFLLNEMMEKGVMPDVQTFTILVDGFCKE---GLILEAKSVISFMVQ--MGVEPNVV 318
Query: 319 THALLVECFTKYCV---VREAIRHFRALI 344
T+ L+ YC+ + EAI+ FR ++
Sbjct: 319 TYNSLIG---GYCLMNEIDEAIKVFRLMV 344
>Medtr1g090120.1 | PPR containing plant-like protein | HC |
chr1:40360702-40363825 | 20130731
Length = 827
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 97/239 (40%), Gaps = 16/239 (6%)
Query: 57 DDTALE-NGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNG 115
+D LE N + ++ M ++ RAR + A + L M A G+ ++ L+ Y+ G
Sbjct: 149 NDNKLELNVIHYNIMIRILGRAR--EWALLEGLWNQMNARGIVATNSTYGTLIDVYSKGG 206
Query: 116 DEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWLI 175
+ A+ L L G+ P T V +V+L+ G + E + W +
Sbjct: 207 LREDALFWLETMLEHGIEPDEVTMVIVVQLYKKAGEFQKAEEFF-----------RKWSL 255
Query: 176 LIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAG 235
NK++ DA + + + Y+ LI+ K G H A + +M G
Sbjct: 256 GEPLRPSNKHMMDAPESVERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQG 315
Query: 236 RMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYD 294
TT FN ++ + G E + M GE PDT TYN +I +T+ D
Sbjct: 316 IPPTTVTFNTMIHICGNHGRLEEVSSLLRKM--GELRCSPDTRTYNTLISLHTKHNDID 372
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M++ G++P ++ L+ + + G + A+D + + ++P TF LV F
Sbjct: 199 DLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 258
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G G + A M K + L++ K + AN +F ++GG+
Sbjct: 259 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDT 318
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
+ Y+++I CK+ A+++ +M + + L + C ++++A
Sbjct: 319 QSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL--IDGLCKSGKISYALKLV 376
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDR 295
E + + PD TY+ ++ A + D+
Sbjct: 377 DEMHDRGVPPDIITYSSILDALCKNHQVDK 406
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 133/309 (43%), Gaps = 22/309 (7%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L +++ G +P +F+ L+ L G+ A++ + + + ++ L+
Sbjct: 120 LFANILKRGYHPDIVTFNTLINGLCLKGEVHKALNFFEKLVVLKFQLDRVSYETLINGLC 179
Query: 148 SKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
G L +L + + + YD+ + +I L ++K ++DA ++ + +
Sbjct: 180 KVGETRAALRLLKEVNEKIVQYDVVM-YTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDV 238
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
Y+ +I C VG +A+ + +M+ A + FN L+S G A
Sbjct: 239 FTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAV 298
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
M ++ +KPD TYN ++ Y + D+ +++ MV+ + + NV+++++++
Sbjct: 299 MM--KEGVKPDIITYNSLMDGYCLVKEVDKAKNI---FNTMVQ--RGVTANVRSYSIMIN 351
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPL--SLYLRALCREGRIVELLEAL 383
F K ++ EA+ F + +H D + S + C+ GRI + LE +
Sbjct: 352 GFCKVKMMDEAMNLF----------QEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELV 401
Query: 384 EAMAKDNHP 392
+ M P
Sbjct: 402 DEMHDRGQP 410
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 17/255 (6%)
Query: 138 TFVALVRLFGSKGSATRGLEILAAM-EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKG 196
++ L+ F G LE+ M E + + +L+ +A K F +
Sbjct: 262 SYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEM 321
Query: 197 SKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIP 256
+ G+ Y +LI+ CKVG +++ M G +++ FN L+ G+
Sbjct: 322 VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMM 381
Query: 257 EVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPN 316
E A ++M+ + + P++ TYN +I + R +S DR LL M E+ ++ PN
Sbjct: 382 EDAICVLDSMKLNK--VCPNSRTYNELICGFCRKKSMDRAM---ALLNKMYEN--KLSPN 434
Query: 317 VKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRI 376
+ T+ L+ K VV A R +I +G + ++ LC+ G++
Sbjct: 435 LVTYNTLIHGLCKARVVDSAWRLHHLMIK-DGFVPD-------QRTFCAFIDCLCKMGKV 486
Query: 377 VELLEALEAMAKDNH 391
+ + E++ K+ H
Sbjct: 487 EQAHQVFESL-KEKH 500
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 110/259 (42%), Gaps = 9/259 (3%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVS-YALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
EL +M P +++ ++ S + A L R G+ P T+ L+
Sbjct: 357 ELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDG 416
Query: 146 FGSKGSATRGLEILAAMEKLNYD-IRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
F + L +L M++ + A+ LI L + K E AN++F + + ++
Sbjct: 417 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSS 476
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
+Y ++I+ K G + A+ + EM+ G + + +N L++ + + AF+ F
Sbjct: 477 VRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFR 536
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
ME E+ PD ++N ++ R R E+ M I+P+ ++ ++
Sbjct: 537 TME--ENGCNPDINSHNIILNGLARTGGPKRAM---EMFAKMKSS--TIKPDAVSYNTVL 589
Query: 325 ECFTKYCVVREAIRHFRAL 343
C ++ + EA + + +
Sbjct: 590 GCLSRAGLFEEATKLMKEM 608
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 112/288 (38%), Gaps = 46/288 (15%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L+ D +A GL +F+ L+ +Y+ G E A + + G P T +L+
Sbjct: 483 KLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNSLLMGL 542
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQ----------------------------------- 171
KG +L M + + I++
Sbjct: 543 CRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYPDV 602
Query: 172 -AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYE 230
A+ LI+ L + +++A +VF++ G N Y+ LI C +G + AL + E
Sbjct: 603 VAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKE 662
Query: 231 MEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRA 290
M G + TF FN ++ G + A F +M + PD T+N ++ Y +A
Sbjct: 663 MRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMH--RIGLMPDIFTFNILVGGYCKA 720
Query: 291 ESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIR 338
R D+ + Y + P++ T+ + + YC VR+ R
Sbjct: 721 FDMVRADDIVN----KMYPYG-LYPDITTYNIRMH---GYCSVRKMNR 760
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 121/303 (39%), Gaps = 21/303 (6%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
++ G +P +F L+ L G + A+ +G G ++ AL+ G
Sbjct: 73 ILKLGYHPTTITFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSYGALISGLCKIGE 132
Query: 152 ATRGLEILAAME-KLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDL 210
L++L +E KL + I+I+ L + K + +A +++ + +
Sbjct: 133 TRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSS 192
Query: 211 LIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG-IPEVAFATFENMEYG 269
LI C VG A + +EM + F L+ G I E M+ G
Sbjct: 193 LIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEG 252
Query: 270 EDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
++P TYN ++ Y ++ ++V ++G +R+ PNV ++ +++ K
Sbjct: 253 ---VEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGK-----RRMTPNVHSYTIIINGLCK 304
Query: 330 YCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAKD 389
+V EA+ F K +H N SL + ALC+ GRI E L+ M
Sbjct: 305 IKMVDEALNFF----------KEMHCEPNTVTYSSL-IDALCKSGRISHAWELLDQMHDR 353
Query: 390 NHP 392
P
Sbjct: 354 GQP 356
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 68 SFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRE 127
S+M + + + S + +M+ +G+ P SF+ L+ + GD +A+D ++
Sbjct: 266 SYMIVISGYCKLSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKM 325
Query: 128 LGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYL 186
+ G P TF +L+ + G GLE+ M+ N+ + I+I L ++ L
Sbjct: 326 ILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRL 385
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEME 232
++A+++ ++ + IY+ +I+ CK G+ A I +ME
Sbjct: 386 QEAHELLRLLNQSEIVPQAFIYNPVIDGYCKSGNVDEANAIVVDME 431
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 139/335 (41%), Gaps = 36/335 (10%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M A ++P ++ L+ + + G + A+D + + + P TF LV F
Sbjct: 63 DLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGF 122
Query: 147 GSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKG 199
+G +LA M K + Y L+ E+ NK A +F S
Sbjct: 123 CKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEV--NK----AESIFNTMSHR 176
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
G+ A + Y ++I CK+ A+ + EM ++ L + C ++
Sbjct: 177 GVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSAL--IDGLCKSGRIS 234
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDR-VQDVAELLGMMVEDYKRIQPNVK 318
+A E + +PD TYN ++ A + D+ + + +L G + I+P++
Sbjct: 235 YALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKG------QGIRPDMN 288
Query: 319 THALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVE 378
T+ +LV+ + + +A + F L+ +K +N Y ++ ++ C +G E
Sbjct: 289 TYTILVKGLCRSGKLEDARKVFEDLL-----VKG-YNLDVY--AYTVMIQGFCDKGLFDE 340
Query: 379 LLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIE 413
L L M ++N IP ++ Y ++ S E
Sbjct: 341 ALALLSKM-EENGCIPD-----AKTYEIIILSLFE 369
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 19/251 (7%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
E+I +M GL+P +++ LV + +G+ A+ L G GL P T+ L+
Sbjct: 285 EVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGM 344
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
+ +R +EIL+ M + + L++ R + +A KV + G +
Sbjct: 345 CKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSV 404
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
Y+ L+ C +G A+ + +M G ++ ++S+ C E+ A
Sbjct: 405 VTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISL--FCRNGELGKAFQMK 462
Query: 266 MEYGEDFMKPDTETYNWVIQAYT----RAESYDRVQDVAELLGMMVEDYKRIQPNVKTHA 321
+E E + PD TY+ +IQ +E++D Q E+LG + + P+ T+
Sbjct: 463 LEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQ---EMLG------RGLSPDEVTYT 513
Query: 322 LLVECFTKYCV 332
L+ YCV
Sbjct: 514 TLMN---GYCV 521
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 5/218 (2%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
S L M+ G+ P ++ L+ + G ++ A + AG +P TF AL+++
Sbjct: 402 SRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKM 461
Query: 146 FGSKGSATRGLEILAAMEKLNY--DIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
G++G +++ +++ DI W L+ N+ + VF + + G
Sbjct: 462 HGNRGMFVEMMKVFEEIKECGCSPDI-VTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVP 520
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
+ ++ LI + G A+ + M +G +N +L+ A G E +
Sbjct: 521 ERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEKII 580
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAE 301
M+ G +P+ TY+ ++ AY + +R++ + E
Sbjct: 581 AEMKDGR--CRPNELTYSSLLHAYANGKEIERMKALGE 616
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 5/218 (2%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
S L M+ G+ P ++ L+ + G ++ A + AG +P TF AL+++
Sbjct: 402 SRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKM 461
Query: 146 FGSKGSATRGLEILAAMEKLNY--DIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
G++G +++ +++ DI W L+ N+ + VF + + G
Sbjct: 462 HGNRGMFVEMMKVFEEIKECGCSPDI-VTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVP 520
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
+ ++ LI + G A+ + M +G +N +L+ A G E +
Sbjct: 521 ERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEKII 580
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAE 301
M+ G +P+ TY+ ++ AY + +R++ + E
Sbjct: 581 AEMKDGR--CRPNELTYSSLLHAYANGKEIERMKALGE 616
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 56/290 (19%)
Query: 84 AVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALV 143
++ L+ + G+ P F+ ++ +++ +G AM R+ G +P TF L+
Sbjct: 96 SIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLI 155
Query: 144 RLFGSKGSATRGLEILAAMEKLNYDIR---QAWLILIEELVRNKYLEDANKVFMKGSKGG 200
+ FG G +++L M + + +++ + + ILI+ LE+A V K G
Sbjct: 156 KGFGIVGRPHEAMKLLEMMIQ-DGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSG 214
Query: 201 LRATNEIYD-------------------------------------LLIEEDCKVGDHSN 223
++ Y+ ++I CK G+ +
Sbjct: 215 MQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTE 274
Query: 224 ALDISYEMEAAGRMATTFHFNCL----LSVQATCGIPEVAFATFENMEYGEDFMKPDTET 279
AL Y+M+ G FN L L + T G+ E A E E+G +KPD T
Sbjct: 275 ALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEE-ALTLME--EFG---IKPDVVT 328
Query: 280 YNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
Y+ ++ A++ + D + E+ MV+ I+P+++ +++L + + +
Sbjct: 329 YSTIMNAWSSSGLMDNCE---EIFDDMVK--AEIEPDIQAYSILAKGYVR 373
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 56/290 (19%)
Query: 84 AVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALV 143
++ L+ + G+ P F+ ++ +++ +G AM R+ G +P TF L+
Sbjct: 96 SIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLI 155
Query: 144 RLFGSKGSATRGLEILAAMEKLNYDIR---QAWLILIEELVRNKYLEDANKVFMKGSKGG 200
+ FG G +++L M + + +++ + + ILI+ LE+A V K G
Sbjct: 156 KGFGIVGRPHEAMKLLEMMIQ-DGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSG 214
Query: 201 LRATNEIYD-------------------------------------LLIEEDCKVGDHSN 223
++ Y+ ++I CK G+ +
Sbjct: 215 MQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTE 274
Query: 224 ALDISYEMEAAGRMATTFHFNCL----LSVQATCGIPEVAFATFENMEYGEDFMKPDTET 279
AL Y+M+ G FN L L + T G+ E A E E+G +KPD T
Sbjct: 275 ALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEE-ALTLME--EFG---IKPDVVT 328
Query: 280 YNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
Y+ ++ A++ + D + E+ MV+ I+P+++ +++L + + +
Sbjct: 329 YSTIMNAWSSSGLMDNCE---EIFDDMVK--AEIEPDIQAYSILAKGYVR 373
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 26/309 (8%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L+ +M+ G P + GLV G+ +A D + + G P + AL+
Sbjct: 310 LMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINAL- 368
Query: 148 SKGSATRGLEIL-AAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
KG E+L M +N + + ILI+ + L+ A F + + G+R T
Sbjct: 369 CKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETI 428
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
Y+ LI CK GD S A + +M G T F L+S E AF +
Sbjct: 429 YPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYRE 488
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
M E + P T+ +I S + + + ++L MVE ++I+P T+ +++E
Sbjct: 489 MNEKE--IAPSVYTFTALIYGLC---STNEMAEASKLFDEMVE--RKIKPTEVTYNVMIE 541
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKALHNG---GNYG-DPLSLYLRALCREGRIVELLE 381
YC + F L + LHNG Y PL + LC GR+ +
Sbjct: 542 ---GYCKAHNMDKAFELLEDM------LHNGLVPDTYTYRPL---ISGLCSTGRVSAAKD 589
Query: 382 ALEAMAKDN 390
++ + K N
Sbjct: 590 FIDDLHKKN 598
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 128/311 (41%), Gaps = 20/311 (6%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
++ G P +F+ L+ +NG + A+ + G ++ L+ G
Sbjct: 11 ILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMGK 70
Query: 152 ATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
T L++L ++ +N D+ + +I+ L ++K + +A ++ + + +
Sbjct: 71 TTEALQVLRKIDGKLVNTDVVM-YSTIIDSLCKDKLVTEAYVLYSEMITKRISPDVVTFS 129
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATC---GIPEVAFATFENM 266
LI C VG A + +EM + FN L V A C E M
Sbjct: 130 ALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNIL--VDAFCKEGNTKEAKNVIAMMM 187
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVEC 326
+ G + PD TY ++ Y ++ + V L+ M + PN ++ +++
Sbjct: 188 KEG---VIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRM-----GLTPNANSYNIIING 239
Query: 327 FTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSL--YLRALCREGRIVELLEALE 384
F K +V EA+ F + +H+ G + + ++ +L ALC+ ++ + + ++
Sbjct: 240 FCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANVITYNSFLHALCKNHQVDKAIAFVK 299
Query: 385 AMAKDNHPIPP 395
+ KD H I P
Sbjct: 300 KI-KD-HGIQP 308
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 20/300 (6%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
M + + P S L+ S+ A L + G F L++ F G
Sbjct: 85 MASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGD 144
Query: 152 ATRGLEILAAMEKLNYDIRQ--AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
+ + +++ M++ N I ++ +I L + K L +A ++F + G + + +
Sbjct: 145 SHKAMDLFCMMKR-NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFS 203
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
LI+ CK GD + EME G F ++ L+S + G E F M
Sbjct: 204 ALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK 263
Query: 270 EDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
+ P+ TY+ ++ A + + + ++ A++L M +++P+V + +L + +K
Sbjct: 264 N--VTPNVVTYSCLMNALCKKQKW---KEAAQMLDTMTG--CKVRPDVVAYTVLADGLSK 316
Query: 330 YCVVREAIRHFRALIN-FEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAK 388
+AI+ ++ E +N + LC+EGR+ + L LE MAK
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNA---------IINGLCKEGRVDDALGILETMAK 367
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 105/277 (37%), Gaps = 45/277 (16%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
EL +M P +F L+ + NGD + L GL + AL+ F
Sbjct: 185 ELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGF 244
Query: 147 GSKGSATRGLEILAAMEKLN-------YDI-------RQAW------------------- 173
SKG RG E+ M + N Y +Q W
Sbjct: 245 CSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDV 304
Query: 174 ---LILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYE 230
+L + L +N DA KV K G N Y+ +I CK G +AL I
Sbjct: 305 VAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILET 364
Query: 231 MEAAGRMATTFHFNCLLSVQATCGIPEVAFAT-FENMEYGEDF-MKPDTETYNWVIQAYT 288
M G+ ++ L V+ CG+ ++ A N+ ++F +KPD +N VIQ
Sbjct: 365 MAKKGKKPDVVTYSTL--VKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELC 422
Query: 289 RAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
+ R++ + MVE + N+ T+ +L++
Sbjct: 423 KQR---RLRHAKRVYYTMVE--RGFPSNIVTYNILID 454
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
+++ +M L P +++ L+ + NG+ + A+ + GLRP T+ AL+
Sbjct: 304 TKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLN- 362
Query: 146 FGSKGSATRGLEILAAMEKLNYD-IRQ---AWLILIEELVRNKYLEDANKV--------- 192
G A GL + + +E++ D +R ++ +I+ L +N LE+A ++
Sbjct: 363 -GISKHAQFGL-VSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSV 420
Query: 193 -------------FMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMAT 239
F+K K GL ++ LI CK+G+ AL+ M +G ++
Sbjct: 421 SPDIVTFSVLVNGFLKAGKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSD 480
Query: 240 TFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMK-----PDTETYNWVIQAY 287
F + L++ CG E EY D M P + T++ +I Y
Sbjct: 481 HFTSSVLVASFCRCG-------RLEEAEYFVDHMSRMGLAPSSVTFDCIIDTY 526
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 10/254 (3%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
MI+ G+ P +++ L+V+ GD + M+ L GLRP T+ +R G
Sbjct: 226 MISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARR 285
Query: 152 ATRGLEILAAM--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
I M E D+ + +LI+ L L+ A ++++K Y
Sbjct: 286 IDDAWGIFKEMDDEGCGPDV-ITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYI 344
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
L+++ KVGD EME G + L+ G + AF + M
Sbjct: 345 TLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTK 404
Query: 270 EDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
F P+ TYN +I +A R+ + ELL M + ++P ++ L ++ + K
Sbjct: 405 GIF--PNLHTYNTMICGLLKAR---RLDEALELLENM--ESLGVKPTAFSYVLFIDYYGK 457
Query: 330 YCVVREAIRHFRAL 343
+AI F +
Sbjct: 458 SGDPAKAIDTFETM 471
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 138/338 (40%), Gaps = 18/338 (5%)
Query: 56 DDDTALENGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNG 115
DD+ + + ++ + + + A D A EL M A+ +P ++ L+ + G
Sbjct: 297 DDEGCGPDVITYTVLIDALCAAGKLDKA--KELYVKMRASSHSPDRVTYITLMDKFGKVG 354
Query: 116 DEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAME-KLNYDIRQAWL 174
D + G P T+ L+ G R ++L M K + +
Sbjct: 355 DLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYN 414
Query: 175 ILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAA 234
+I L++ + L++A ++ G++ T Y L I+ K GD + A+D M+
Sbjct: 415 TMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKR 474
Query: 235 GRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYD 294
G M + N L A G A F ++ + + PD+ TYN +++ Y++A D
Sbjct: 475 GIMPSIAACNASLYTLAETGRISEAEDIFNDLH--KCGLSPDSVTYNMLMKCYSKAGQID 532
Query: 295 RVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALH 354
+ +LL M+ K +P+V L+ K V A + F L N + +
Sbjct: 533 K---ATQLLSEMIS--KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVV- 586
Query: 355 NGGNYGDPLSLYLRALCREGRIVELLEALEAMAKDNHP 392
++ L L +EG+I++ LE +M + P
Sbjct: 587 -------TYNILLTGLGKEGKILKALELFGSMTESGCP 617
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 12/263 (4%)
Query: 63 NGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMD 122
N + + + + ++ N + A +L Y++++ +P P ++ L+ G + AM
Sbjct: 865 NAITHNIIISALVKSNNLNKAL--DLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMK 922
Query: 123 SLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAM--EKLNYDIRQAWLILIEEL 180
L G P + L+ FG G E+ M E + D++ ++ IL+E L
Sbjct: 923 IFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLK-SYTILVECL 981
Query: 181 VRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATT 240
+++A + F + GL Y+ +I K AL + EM+ G
Sbjct: 982 CITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDL 1041
Query: 241 FHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVA 300
+ +N L+ G +VA +E ++ ++P TYN +I+ ++ + + D+ V
Sbjct: 1042 YTYNALILHLGIAGKVDVAVKMYEELQLVG--LEPSVFTYNALIRGHSLSGNKDQAFSVF 1099
Query: 301 ELLGMMVEDYKRIQPNVKTHALL 323
+ MMV PN +T A L
Sbjct: 1100 K--KMMVVG---CSPNTETFAQL 1117
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 116 DEQAAMDSLRRELGAGLRPVHETFVALVR-LFGSKGSATRGLEILAAMEKL-NYDIRQAW 173
D Q D + LG + P E++ L+ L GS + + LE+ M+ + +
Sbjct: 778 DAQNVFDKFTKNLG--IHPTLESYNCLMDGLLGSNFTE-KALELFEDMKSAGTHPNNFTY 834
Query: 174 LILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEA 233
+L++ ++K + ++ + G ++++I K + + ALD+ YE+ +
Sbjct: 835 NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894
Query: 234 AGRMATTFHFNCLLSVQATCGIPEVAFATFENM-EYGEDFMKPDTETYNWVIQAYTRAES 292
T + L+ G E A FE M +YG P++ YN +I + ++
Sbjct: 895 GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG---CGPNSVIYNILINGFGKSGE 951
Query: 293 YDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRAL 343
D EL MV++ I+P++K++ +LVEC + EA+++F L
Sbjct: 952 IDFA---CELFKKMVKE--GIRPDLKSYTILVECLCITGRIDEAVQYFEEL 997
>Medtr3g008430.2 | PPR containing plant-like protein | HC |
chr3:1537892-1535131 | 20130731
Length = 503
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 131 GLRPVHETFVALVRLFGSKGSATRGLEILAAME-----KLNYDIRQAWLILIEELVRNKY 185
L P TF L++ S + + +E KL D + L++ L + Y
Sbjct: 125 NLPPTPTTFFILIKRLISANLTRQAVRAFNEIESYTDTKLTSD---HFTYLLDTLCKYGY 181
Query: 186 LEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNC 245
++ A ++F + S A ++Y +LI CK+G AL EM+ G +N
Sbjct: 182 VKHACELFNRNS-NRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNV 240
Query: 246 LLS--VQATCGIPEVAF--------ATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDR 295
+L+ + PE F F+ M E ++PD +++ V+ Y+RA +
Sbjct: 241 ILNGICRKASLHPEERFERTIRDAEKVFDEMR--ESGIEPDVTSFSIVLHVYSRAH---K 295
Query: 296 VQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREA 336
Q V + LG+M E K I PNV T+ +++C + EA
Sbjct: 296 PQLVLDKLGLMKE--KGICPNVVTYTSVIKCLCSCGRIEEA 334
>Medtr3g008430.1 | PPR containing plant-like protein | HC |
chr3:1537892-1533804 | 20130731
Length = 503
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 131 GLRPVHETFVALVRLFGSKGSATRGLEILAAME-----KLNYDIRQAWLILIEELVRNKY 185
L P TF L++ S + + +E KL D + L++ L + Y
Sbjct: 125 NLPPTPTTFFILIKRLISANLTRQAVRAFNEIESYTDTKLTSD---HFTYLLDTLCKYGY 181
Query: 186 LEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNC 245
++ A ++F + S A ++Y +LI CK+G AL EM+ G +N
Sbjct: 182 VKHACELFNRNS-NRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNV 240
Query: 246 LLS--VQATCGIPEVAF--------ATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDR 295
+L+ + PE F F+ M E ++PD +++ V+ Y+RA +
Sbjct: 241 ILNGICRKASLHPEERFERTIRDAEKVFDEMR--ESGIEPDVTSFSIVLHVYSRAH---K 295
Query: 296 VQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREA 336
Q V + LG+M E K I PNV T+ +++C + EA
Sbjct: 296 PQLVLDKLGLMKE--KGICPNVVTYTSVIKCLCSCGRIEEA 334
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 15/304 (4%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L+ +M++ GL P +++ +V G A + L R G T+ L+R
Sbjct: 237 KLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDL 296
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATN 205
++G G ++++ M + + LI L R+ +++A V + L
Sbjct: 297 LNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDG 356
Query: 206 EIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFEN 265
YD LI C+ G A++ +M + G + +N +L+ G + A FE
Sbjct: 357 YSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEK 416
Query: 266 MEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVE 325
+ GE P+ +YN + A S D+++ + +L M+ I P+ T+ L+
Sbjct: 417 L--GEVGCPPNAGSYNTLFGAL--WSSGDKIRALGMILEMLSNG---IDPDEITYNSLIS 469
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEA 385
C + +V +AI + E K +Y + L LC+ RI++ +E L A
Sbjct: 470 CLCRDGLVDQAIELLVDMFESE---KCQPTVISY----NTVLLGLCKVQRIIDAIEVLAA 522
Query: 386 MAKD 389
M +
Sbjct: 523 MVNE 526
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 9/241 (3%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L+ DM+ G P P ++ L+ + +G A + L+ L P ++ L+
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366
Query: 147 GSKGSATRGLEILAAMEKLNY--DIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRAT 204
+G +E L M + DI ++ ++ L +N ++A +F K + G
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDIL-SYNSILASLCKNGNADEALNIFEKLGEVGCPPN 425
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
Y+ L GD AL + EM + G +N L+S G+ + A
Sbjct: 426 AGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLV 485
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLV 324
+M + + +P +YN V+ + + R+ D E+L MV + PN T+ LL+
Sbjct: 486 DM-FESEKCQPTVISYNTVLLGLCKVQ---RIIDAIEVLAAMVNE--GCLPNETTYTLLI 539
Query: 325 E 325
+
Sbjct: 540 Q 540
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 145/361 (40%), Gaps = 44/361 (12%)
Query: 62 ENGLRFSFMEELMNRARNRDSAAVSELI---------------YDMIAA-GLNPGPRSFH 105
+N L FS + ++ + + D+ ++ LI +D +AA G S+
Sbjct: 25 QNPLSFSVLAKIFKKGYDPDAITLTSLIKGLCLKGQIHQALHFHDKLAALGFRFNHVSYG 84
Query: 106 GLVVSYALNGDEQAAMDSLRRELG------AGLRPVHETFVALVR-----LFGSKGSATR 154
L+ G +AA+ LRR G G+ P T+ AL+ F +G
Sbjct: 85 TLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVTYSALISGFCILAFCKEGKVKE 144
Query: 155 GLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIE 213
+ AAM K + + L++ K + A +F ++GG+ + Y++LI
Sbjct: 145 AKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILIN 204
Query: 214 EDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFM 273
CK+ A+++ EM + +N L + C ++++A E +
Sbjct: 205 GFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSL--IDGLCKSGKISYALKLVDEMHDRGQ 262
Query: 274 KPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVV 333
PD TY+ ++ A + D+ A L ++D + +QPN+ T+ +L+ K
Sbjct: 263 PPDIITYSSLLDALCKNHHVDK----AIALLTKLKD-QGLQPNMYTYTILINGLCKGGRP 317
Query: 334 REAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAKDNHPI 393
+A F L+ +K + N ++ + C G E L L M ++N I
Sbjct: 318 EDAQNIFEDLL-----VKGYNINVN---TYTVMIHVFCNNGMFGEALAMLSKM-EENGCI 368
Query: 394 P 394
P
Sbjct: 369 P 369
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 10/235 (4%)
Query: 98 NPGPRSFH-GLVVSYALNGDEQAAMDSLRREL-GAGLRPVHETFVALVRLFGSKGSATRG 155
NP P F G ++ + + + + SL R++ G+ L+ F G
Sbjct: 67 NPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLS 126
Query: 156 LEILAAMEKLNYDIRQAWLI-LIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEE 214
+LA + K+ Y+ L LI+ L + A + K G Y LI
Sbjct: 127 FSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLING 186
Query: 215 DCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMK 274
CKVG S AL + ++ +N ++ + AF + M +
Sbjct: 187 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV--SKGIS 244
Query: 275 PDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
PD TYN +I + +++D +L M+ ++ I PNV T +LV+ F K
Sbjct: 245 PDVVTYNALISGFCIV---GKMKDATDLFNKMI--FENINPNVYTFNILVDGFCK 294
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 139/335 (41%), Gaps = 36/335 (10%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M A ++P ++ L+ + + G + A+D + + + P TF LV F
Sbjct: 175 DLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGF 234
Query: 147 GSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKG 199
+G +LA M K + Y L+ E+ NK A +F S
Sbjct: 235 CKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEV--NK----AESIFNTMSHR 288
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
G+ A + Y ++I CK+ A+ + EM ++ L + C ++
Sbjct: 289 GVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSAL--IDGLCKSGRIS 346
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDR-VQDVAELLGMMVEDYKRIQPNVK 318
+A E + +PD TYN ++ A + D+ + + +L G + I+P++
Sbjct: 347 YALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKG------QGIRPDMN 400
Query: 319 THALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVE 378
T+ +LV+ + + +A + F L+ +K +N Y ++ ++ C +G E
Sbjct: 401 TYTILVKGLCRSGKLEDARKVFEDLL-----VKG-YNLDVYA--YTVMIQGFCDKGLFDE 452
Query: 379 LLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIE 413
L L M ++N IP ++ Y ++ S E
Sbjct: 453 ALALLSKM-EENGCIPD-----AKTYEIIILSLFE 481
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L +M+ +NP +F+ LV + G+ + A + L + G+ P T+ +L+ +
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324
Query: 148 SKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
+ +L + ++ ++ +I + K +++A +F G+
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
Y+ LI+ CK G S A ++ EM G+ A F +NCL + A C V A
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL--IDALCKNHHVDQAIALVK 442
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAE 301
+ + ++PD T+N +I + QDV +
Sbjct: 443 KIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQ 477
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L +M+ +NP +F+ LV + G+ + A + L + G+ P T+ +L+ +
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324
Query: 148 SKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
+ +L + ++ ++ +I + K +++A +F G+
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
Y+ LI+ CK G S A ++ EM G+ A F +NCL + A C V A
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL--IDALCKNHHVDQAIALVK 442
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAE 301
+ + ++PD T+N +I + QDV +
Sbjct: 443 KIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQ 477
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 143/349 (40%), Gaps = 46/349 (13%)
Query: 74 MNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLR 133
+N A + S VS+ I+ P +++ L+ + + G + A+D + +
Sbjct: 349 VNDAFDLYSEKVSKRIF--------PDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNII 400
Query: 134 PVHETFVALVRLFGSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYL 186
P TF LV F G+ +LA M K + Y L+ E+ NK
Sbjct: 401 PDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV--NK-- 456
Query: 187 EDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCL 246
A +F S G+ A + Y+++I CK+ A+ + EM ++ L
Sbjct: 457 --AESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514
Query: 247 LSVQATCGIPEVAFATFENMEY-GEDFMKPDTETYNWVIQAYTRAESYDR-VQDVAELLG 304
+ G A + M Y G+ +PD TYN ++ A + D+ + + +L G
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQ---QPDIITYNSILDALCKKHHVDKAITLLTKLKG 571
Query: 305 MMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLS 364
+ I+P++ T+ +LV+ + + +A + F L+ +K +N Y +
Sbjct: 572 ------QGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLL-----VKG-YNLDVYA--YT 617
Query: 365 LYLRALCREGRIVELLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIE 413
+ ++ C +G E L L M ++N IP ++ Y ++ S E
Sbjct: 618 VMIQGFCDKGLFDEALALLSKM-EENGCIPD-----AKTYEIIILSLFE 660
>Medtr7g025610.1 | PPR containing plant-like protein, putative | HC
| chr7:8534854-8532764 | 20130731
Length = 646
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 137/350 (39%), Gaps = 38/350 (10%)
Query: 124 LRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVR 182
LR L P TF A++ F + + +IL M L ++ W +LI +
Sbjct: 167 LREMLRLRYCPNASTFSAVLNAFCKMNAFRQVYQILGLMIGLGIELSVNVWTVLIHHFCK 226
Query: 183 NKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFH 242
L+ A+ +F K + + Y LI+ + D + AL + +M + G +
Sbjct: 227 LGKLDVADDLFDKMIQSCCSPNSVTYTPLIKAVMESDDVTLALRLEQKMNSVGIVPDLVF 286
Query: 243 FNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAEL 302
+N L+ + G+ E A FE + KPD T+ ++ A R+E +D L
Sbjct: 287 YNMLIDCLSKSGMHEEAIRVFEQKNF-----KPDKYTFTSLLSAICRSEQFD-------L 334
Query: 303 LGMMVEDYKRIQPN-VKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGD 361
L +V+ K I + V +ALL+ +A RAL +E I Y
Sbjct: 335 LPKLVQHCKHISRDLVFCNALLIS-------YVKAGYSSRALELYERMISEGFKPDKY-- 385
Query: 362 PLSLYLRALCREGRIVELLEALEAMAKDN------HPIPPRAMILSRKYRTLVSSWIEPL 415
+ L ALC E R E ++ A+ D+ H + + + +Y +I
Sbjct: 386 TFAGLLSALCAENRNDEAVKVWRAVTMDHTDDVHIHTVISNELKKAGQYEQASDVFI--- 442
Query: 416 QEEAELGYEIDYIARYVE-----EGGLTGERKRWVPRSGKTPLDPDCDGF 460
EA Y +D IA V G T E + + K L+P+ F
Sbjct: 443 -SEAVKKYPLDSIAYGVGIDAHLRSGRTLEARTLYDQMKKNGLEPNFQTF 491
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 25/260 (9%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +M+A ++P ++ L+ + + G + A+D + + ++P TF LV F
Sbjct: 244 DLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 303
Query: 147 GSKGSATRGLEILAAMEKLNYDIR---QAWLILIEELVRNKYLEDANKVFMKGSKGGLRA 203
+G + +L M + DI+ + L++ +++ +++ VF K G++
Sbjct: 304 CKEGRLKKAKNVLDMM--MIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 361
Query: 204 TNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATF 263
Y L++ C V + A I M G A +N + + C I +V A
Sbjct: 362 NVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIM--INGFCKIKKVDKAMK 419
Query: 264 ENMEYGEDFMKPDTETYNWVIQAYTRA-----------ESYDRVQ-----DVAELLGMMV 307
+E + PD TYN +I ++ E +DR Q +L ++
Sbjct: 420 LFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL 479
Query: 308 EDYKR--IQPNVKTHALLVE 325
K IQPN+ T +L++
Sbjct: 480 TKLKDQGIQPNMHTDTILIK 499
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 96 GLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRG 155
G+N S++ L+ + G + AM + E+ + P H T+ L+ +
Sbjct: 265 GINLDIVSYNSLIYGFCKEGKMREAM-RMFGEIKDAI-PNHVTYTTLIDGYCKANEFEEA 322
Query: 156 LEILAAM-EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEE 214
L + M K Y + ++ +L + + DANK+ + S+ ++A + + LI
Sbjct: 323 LRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINA 382
Query: 215 DCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFA---TFENMEYGED 271
CK+GD ++AL +M AG +F + L + C E+ A F ++ G
Sbjct: 383 YCKIGDLNSALKFKTKMLEAGLTPNSFTYKAL--IHGFCKTSELESAKELLFGMLDAG-- 438
Query: 272 FMKPDTETYNWVIQAYTRAESYDRV 296
P+ TY+W++ +Y + ++ D V
Sbjct: 439 -FSPNYRTYSWIVDSYCKKDNTDAV 462
>Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:9674893-9670547 | 20130731
Length = 687
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 93/210 (44%), Gaps = 7/210 (3%)
Query: 138 TFVALVRLFGSKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVFMKG 196
TF AL+++F G+ L + M+ L + + +L+ ++R K A ++ +
Sbjct: 254 TFSALIKMFDLNGNYDGCLNMHLEMKGLGVKANVEMYNVLLVAMLRGKRHWQAKTIYQEM 313
Query: 197 SKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIP 256
G+ Y L+ + +A+ + EM+ G + +N LL++ A G
Sbjct: 314 KSNGVSPDFTTYSTLLRIYTRAQFGQDAISVYKEMKGKGMNVSIDLYNVLLAMCADVGCN 373
Query: 257 EVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPN 316
+ A F++++ PD+ T++ +I Y+ +V + +L M++ +PN
Sbjct: 374 DEALEIFQDIKNSRT-CTPDSWTFSALINVYSNT---GKVFEAEAMLDEMIK--SGFEPN 427
Query: 317 VKTHALLVECFTKYCVVREAIRHFRALINF 346
+ LV+C+ K + + ++ F +N
Sbjct: 428 IFVMVSLVQCYGKVKRIDDVVKVFNRFLNL 457
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 43/283 (15%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVH 136
++ + AA + +M GL P +++ L+ NG + A+D + +G GL+P
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343
Query: 137 ETFVALVRLFGSK---GSATRGLEILAAMEKLNYDIRQAWLI------------------ 175
T+ AL+ F K AT+ L+ ++ E + I +I
Sbjct: 344 VTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403
Query: 176 ---------------LIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGD 220
LI L R + L+ A ++ + GL+ Y++LI+ CK
Sbjct: 404 MLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDK 463
Query: 221 HSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETY 280
NA + EM G +N L+ G + A + ME ++ +P+ TY
Sbjct: 464 SRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRME--KERKQPNVVTY 521
Query: 281 NWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
N +I+ Y + ++++ LL M+E K + PN T+ ++
Sbjct: 522 NVLIKGYCKI---NKLEAANGLLNEMLE--KGLNPNRTTYDIV 559
>Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:9664816-9662405 | 20130731
Length = 691
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 17/265 (6%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAM---DSLRRELGAGLRPVHETFVALV 143
EL M G P ++ YA G+ A+ DS + E +RPV F AL+
Sbjct: 205 ELFERMPDFGCEPDYNVSSSMIYVYARTGNVDMALKLYDSAKNEKWV-IRPV--AFSALI 261
Query: 144 RLFGSKGSATRGLEILAAMEKLNYDIRQAWLI---LIEELVRNKYLEDANKVFMKGSKGG 200
+++G G+ L + M+ L +R ++ L+ + R K DA V+ + K G
Sbjct: 262 KMYGILGNYDGCLSVYNDMKVLG--VRPNMVLYNALLYAMGRAKRARDAKGVYQEMKKNG 319
Query: 201 LRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAF 260
Y L+E + AL + EM+ G ++ LL + A G + A
Sbjct: 320 FVPNWGTYAALLEAYSRGRLSKEALSVYKEMKEKGMSMNKVLYSMLLDMCADVGFVDEAV 379
Query: 261 ATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTH 320
FE+M+ +PD Y +I Y+ ++ + +L M+ ++PN+
Sbjct: 380 EIFEDMKCSMT-CQPDNYIYTSLINMYSWN---GKIPEAEAMLKEMIS--CGLEPNILVL 433
Query: 321 ALLVECFTKYCVVREAIRHFRALIN 345
+ V C+ K + + F ++
Sbjct: 434 TMFVHCYGKAKRTNDVVNIFNQFMD 458
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 133/302 (44%), Gaps = 20/302 (6%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L +M+ ++P +F+ L+ NG+ + A + L + +G++ T+ +L+ +
Sbjct: 259 LFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMDGYF 318
Query: 148 SKGSATRGLEILAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
+ ++ M + ++ I+I+ L +K +++A +F K +
Sbjct: 319 QVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTV 378
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
Y+ LI CK G S LD+ EM G+ A + L+ + A A F M
Sbjct: 379 TYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAIALFTKM 438
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQP-NVKTHALLVE 325
+ + ++P+ TYN +I ++ R+ D L+ E + R QP NV T+ L++
Sbjct: 439 K--DLGVEPNVYTYNILIDRLCKS---GRIADAWYLID---EMHDRGQPANVVTYTSLID 490
Query: 326 CFTKYCVVREAIRHFRALINFEGGIKA-LHNGGNYGDPLSLYLRALCREGRIVELLEALE 384
K + +AI F IN + GI+A +H ++ + LC+ GR+ LE
Sbjct: 491 GLCKNHNLDKAIEFFTK-IN-DWGIQADVHT-------YTVLIDGLCKGGRLKNALEVFR 541
Query: 385 AM 386
+
Sbjct: 542 IL 543
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 144/340 (42%), Gaps = 26/340 (7%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVH 136
+N+ S L +MI + P ++ L+ + + G + A+ L + L +
Sbjct: 104 CKNKLIIDASALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDV 163
Query: 137 ETFVALVRLFGSKGSATRGLEILAAMEK--LNYDIRQAWLILIEELVRNKYLEDANKVFM 194
+TF LV +G + +LA M K ++ DI ++ L++ K + A VF
Sbjct: 164 QTFNTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIF-TYISLMDGYFLVKEVNKATYVFN 222
Query: 195 KGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG 254
++ G+ + + Y ++I CK A+++ E++ T +N L+ G
Sbjct: 223 TIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSG 282
Query: 255 -IPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRI 313
I +V E G+ D TYN ++ A + D+ A L ++D + I
Sbjct: 283 RISDVWDLIDEMHNIGQ---PADVITYNSLLDALCKNHQVDK----AITLLTKIKD-QGI 334
Query: 314 QPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCRE 373
QPN+ T+ +LV+ K +++A ++ L+ IK H S+ + LC+E
Sbjct: 335 QPNMYTYTILVDGLCKNGRLKDAQVVYQNLL-----IKGYHLDVKM---YSVMVNGLCKE 386
Query: 374 GRIVELLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIE 413
G + L + M +DN P + Y TL+ + E
Sbjct: 387 GLFDDALSLVSKM-EDNSCTPN-----AVTYETLIRALFE 420
>Medtr1g066900.1 | PPR containing plant-like protein | HC |
chr1:28759663-28757173 | 20130731
Length = 719
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNG---DEQAAMDSLRRELGAGLRPVHETFVALVRLFGS 148
++ P R + L+ Y G D ++++R + + P H ++ +V
Sbjct: 348 LLPKAYTPNTRIYTTLMKGYMKAGRVADTVRMLEAMRYQEDSSSHPDHVSYTTVVSALVK 407
Query: 149 KGSATRGLEILAAMEKLNYDI-RQAWLILIEELVRNKYLEDANKVFMKGSKG-GLRATNE 206
G R ++LA M ++ R + IL++ + ++ A ++ + ++ G+
Sbjct: 408 AGFMDRAHQVLAEMTRIGVPANRITYNILLKGYCKQLQMDKAMELLQEMAEDIGIEPDVV 467
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
Y++LI+ V D + AL EM A G T + L+ A G P++A F+ M
Sbjct: 468 SYNILIDGCILVDDSAGALSFFNEMRAKGIAPTKVSYTTLMKAFALSGQPKLAQRVFDEM 527
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTH 320
+ ++ D +N +++ Y+R V++V +++ M E+ PNV T+
Sbjct: 528 -VTDARVRVDLIAWNMLVEGYSR---LGLVEEVKKVIQKMKEN--GFYPNVSTY 575
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 107/243 (44%), Gaps = 8/243 (3%)
Query: 88 LIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFG 147
L + M+ +NP +F+ LV + G+ + A ++L + ++P T+ +L+ +
Sbjct: 255 LFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYC 314
Query: 148 SKGSATRGLEILAAMEKLNYDI-RQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNE 206
+ +L+ + ++ Q++ I+I + K + +A +F + +
Sbjct: 315 LVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTV 374
Query: 207 IYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENM 266
Y+ LI+ CK G S+A + EM G+ F ++ L+ + A A + +
Sbjct: 375 TYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKI 434
Query: 267 EYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVEC 326
+ + ++P+ TYN +I + QDV + ++ + Y N++T+ +L+
Sbjct: 435 K--DQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQ--DLLTKGYSL---NIRTYNILING 487
Query: 327 FTK 329
K
Sbjct: 488 LCK 490
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 100/257 (38%), Gaps = 49/257 (19%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVH 136
R D A E+ DM AG+ P ++ ++ S G A D + AG P
Sbjct: 258 CRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNA 317
Query: 137 ETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKG 196
TF +L+R+ G + L++ M++L
Sbjct: 318 VTFNSLMRVHVKAGRTEKVLQVYNQMKRL------------------------------- 346
Query: 197 SKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRM--ATTFH--FNCLLSVQAT 252
G A Y+ LIE CK + A+ + M G A+TF+ F C+ +
Sbjct: 347 ---GCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDV 403
Query: 253 CGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR 312
G A + M+ E P+T TYN +++ + ++S D V + + + D
Sbjct: 404 NG----AHRMYAKMK--ELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEM-----DESE 452
Query: 313 IQPNVKTHALLVECFTK 329
++PNV T+ +L+ F +
Sbjct: 453 VEPNVNTYRILILMFCE 469
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 122/306 (39%), Gaps = 19/306 (6%)
Query: 92 MIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGS 151
++ GL P +F ++ G + A + L +G G +P T +L+ KG
Sbjct: 206 LVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGW 265
Query: 152 ATRGLEI-LAAMEKLNYDIR-QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
+ + L + N+ + +I R L A + + + GL Y
Sbjct: 266 TEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYT 325
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
LI+ CK G+ A D+ M + G +N +++ G + A+ E +
Sbjct: 326 TLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE--DGF 383
Query: 270 EDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
++ +KPD TYN ++ + + E+ ++ L M++ IQP++ ++ L+ F +
Sbjct: 384 QNGLKPDKFTYNILMSEHCKQEN---IRQALALFNKMLK--IGIQPDIHSYTTLIAVFCR 438
Query: 330 YCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAKD 389
++E+ F + I + Y + Y CREG + ++ ++
Sbjct: 439 ENRMKESEMFFEEAVR----IGIIPTNKTYTSMICGY----CREGNLTLAMKFFHRLS-- 488
Query: 390 NHPIPP 395
+H P
Sbjct: 489 DHGCAP 494
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 142/349 (40%), Gaps = 41/349 (11%)
Query: 69 FMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRREL 128
F + L + +++ V L M G+ P +F+ L+ + G A L + L
Sbjct: 73 FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132
Query: 129 GAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQ-AWLILIEELVRNKYLE 187
G P T ++ F KG + L + L + + Q ++ LI L +
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192
Query: 188 DANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLL 247
A ++ + ++ +Y +I+ CK + ++A D+ EM + + ++ L+
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252
Query: 248 SVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMV 307
S G + A F M + + PD T+N ++ A+ + RV++ L MM+
Sbjct: 253 SGFCIVGKLKDAIGLFNKMT--SENINPDVYTFNILVDAFCKE---GRVKEAKNGLAMMM 307
Query: 308 EDYKRIQPNVKTHALLVECFTKYCVVREA------------------IRHFRALINFEGG 349
+ + I+P++ T+ L++ YC+V E +R + +IN
Sbjct: 308 K--QGIKPDIVTYNSLMD---GYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCK 362
Query: 350 IKA----------LHNGGNYGDPLSL--YLRALCREGRIVELLEALEAM 386
IK +H+ + + ++ + LC+ GRI LE ++ M
Sbjct: 363 IKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLM 411
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 114/284 (40%), Gaps = 45/284 (15%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVH 136
++ + AA + +M GL P +++ L+ NG + A+D + +G GL+P
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343
Query: 137 ETFVALVRLFGSK-----------------------------------GSATRGLEILAA 161
T+ AL+ F K G G + ++
Sbjct: 344 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403
Query: 162 M--EKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVG 219
M E + ++ + LI L R + L+ A ++ + GL+ Y++LI+ CK
Sbjct: 404 MLDEGILPNV-STYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKND 462
Query: 220 DHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTET 279
NA + EM G +N L+ G + A ME ++ +P+ T
Sbjct: 463 KSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME--KERKQPNVVT 520
Query: 280 YNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
YN +I+ Y + ++++ LL M+E K + PN T+ ++
Sbjct: 521 YNVLIKGYCKI---NKLEAANGLLNEMLE--KGLNPNRTTYDIV 559
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 26/246 (10%)
Query: 99 PGPRSFHGLVVSYALNG--DEQAA-MDSLRRELGAGLRPVHETFVALVRLFGSKGSATRG 155
P +++ LV +Y G DE AA +D++ + G+ P T+ ++ +G G A +
Sbjct: 376 PDAITYNELVAAYVRAGFHDEGAAVIDTMASK---GVMPNAITYTTVINAYGKAGDADKA 432
Query: 156 LEILAAMEKL----NYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLL 211
LE+ M++L N L+L+ + R+ ED K+ G ++ +
Sbjct: 433 LEVFGQMKELGCVPNVCTYNNVLVLLGKRSRS---EDMIKILCDMKLNGCPPDRITWNTM 489
Query: 212 IEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGED 271
+ + G + EM+ G FN L+S CG EV A YGE
Sbjct: 490 LAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCG-SEVDVAKM----YGEM 544
Query: 272 F---MKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFT 328
P TYN ++ A R ++ + V +L M + +K PN +++LL+ C++
Sbjct: 545 VAAGFTPCITTYNALLNALARRGNWKAAESV--VLDMRKKGFK---PNETSYSLLLHCYS 599
Query: 329 KYCVVR 334
K VR
Sbjct: 600 KAGNVR 605
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 140/344 (40%), Gaps = 39/344 (11%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
EL +MI ++P +F L+ + + G + A + + + + P TF LV
Sbjct: 222 ELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVDAL 281
Query: 147 GSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKG 199
+G L M K + Y+ L+ E+ + K+L S+
Sbjct: 282 CKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSII------SRI 335
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
G+ + Y ++I CK+ AL + YEM G T ++ L+ G A
Sbjct: 336 GVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCA 395
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKT 319
+ + M P+ TY+ +I A + D+ + + ++D + IQP++ T
Sbjct: 396 WELVDEMHVNGQ--PPNIFTYSSLIDALCKNNHLDKAMTLVK----KIKD-QGIQPDMYT 448
Query: 320 HALLVECFTKYCVVREAIRHFRALIN--FEGGIKALHNGGNYGDPLSLYLRALCREGRIV 377
+ +L++ K ++ A F+ L+ + I++ ++ + LC++G +
Sbjct: 449 YNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRS----------YNILINGLCKDG-LF 497
Query: 378 ELLEALEAMAKDNHPIPPRAMILSRKYRTLVSS-WIEPLQEEAE 420
+ EAL + K N IP Y T++ S + + E+AE
Sbjct: 498 DKAEALLSKMKGNDVIPDAV-----TYETIIHSLFYKDENEKAE 536
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 144/340 (42%), Gaps = 46/340 (13%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +MI ++P +++ L+ +++ G + A+ L + + P TF LV
Sbjct: 215 DLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGL 274
Query: 147 GSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKG 199
+G + +LA M K + Y L++E+ + K+L N + ++G
Sbjct: 275 CKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHL--FNTLPLRGVTP 332
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCG-IPEV 258
+ + Y+++I CK + A ++ EM ++ T +N L+ G I +V
Sbjct: 333 NVFS----YNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDV 388
Query: 259 AFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVK 318
E + G+ + TYN ++ A + D+ A L ++D + IQPN+
Sbjct: 389 WDLLVEMHDIGQ---PANVITYNSLLDALCKNHQVDK----AIALLKKIKD-QGIQPNMY 440
Query: 319 THALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPL--SLY---LRALCRE 373
T+ +LV+ K + +A + L+ G PL S+Y + C+E
Sbjct: 441 TYTILVDGLCKNGRLEDAQEIYHDLL-------------TKGYPLNVSMYNVMVNEFCKE 487
Query: 374 GRIVELLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIE 413
G E L L M +++ P A+ Y+TL+ + E
Sbjct: 488 GLFDEALSLLSKM--EDNGCTPNAI----TYQTLICALFE 521
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 118/296 (39%), Gaps = 27/296 (9%)
Query: 67 FSFMEELMNRARNRDSAAVSELI--------YD-------MIAAGLNPGPRSFHGLVVSY 111
S ++E+ + D A + LI YD MI GL P +++ ++ SY
Sbjct: 615 LSIVQEMTEKNTRFDVVACNTLIKGLLRLGKYDPQNVCSRMIELGLAPNCVTYNTIINSY 674
Query: 112 ALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNY---D 168
+ G+ + A+ L G+ P T+ L+ G + ++L M +
Sbjct: 675 CIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVVPTP 734
Query: 169 IRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDIS 228
I +L+ + R K + ++ K GL+ T +Y+ LI C++G A +
Sbjct: 735 ITHKFLV--KAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTRKAKVVL 792
Query: 229 YEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYT 288
EM G A +N L+ T E AF T+ M D + P+ TYN ++ +
Sbjct: 793 DEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFV--DGISPNITTYNTLLWGLS 850
Query: 289 RAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALI 344
A + GM + PN T+ +LV + + E+ + +R ++
Sbjct: 851 NAGLMKGTDKIVR--GMKERGF---VPNAATYDILVSGYGRVGNKEESTKFYREML 901
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 138/330 (41%), Gaps = 26/330 (7%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L+ M GL+P + L+ NGD A + G L T+ L+ F
Sbjct: 185 QLLGMMEKTGLSPNVVIYTTLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGF 244
Query: 147 GSKGSATRGLEILAAMEKLNYDIRQAWLI--LIEELVRNKYLEDANKVFMKGSKGGLRAT 204
+G G ++ +M KL+ + + +I E + ++ A VF + + + +
Sbjct: 245 FKQGLQKEGFQMYESM-KLSGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACS 303
Query: 205 NEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFE 264
Y+LLI C++ A+ + Y + G F +N L ++ C ++ A
Sbjct: 304 IMTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTL--IKGYCDAEKIDTAVRL 361
Query: 265 NMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR-IQPNVKTHALL 323
E + + P TYN +I Y+ +V ++A L ++ E +R I P T+ +L
Sbjct: 362 YNELKSNGLSPTVVTYNTLIAGYS------KVGNLAGALNLVKEMEERNIAPTKVTYTIL 415
Query: 324 VECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEAL 383
+ F + + +A +L+ G + ++ G + + LC G + E +
Sbjct: 416 LNGFVRINYMEKAFE-IHSLMEKSGLVSDVYTYG-------VLIHGLCMNGSMKEASKLF 467
Query: 384 EAMAKDNHPIPPRAMILSRKYRTLVSSWIE 413
+++ + N + P ++I Y TL+ + +
Sbjct: 468 KSLDELN--MEPNSVI----YDTLIHGYCK 491
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 122/300 (40%), Gaps = 28/300 (9%)
Query: 87 ELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLF 146
+L +MI + P +F+ L+ + + G + A+ + P TF LV
Sbjct: 216 DLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGL 275
Query: 147 GSKGSATRGLEILAAMEK-------LNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKG 199
+G R +L M K + Y+ L++E+ + Y VF ++
Sbjct: 276 CKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATY------VFDTLARR 329
Query: 200 GLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVA 259
G+ Y ++I CKV A+ + EM + T +N L+ G
Sbjct: 330 GVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDV 389
Query: 260 FATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQP-NVK 318
+ + M+ + +KPD TY+ +I ++ R+ D L+ M + R QP NV
Sbjct: 390 WYLIDEMQIKDLGVKPDVYTYSILIDRLCKS---GRIADAWYLIDEM---HDRGQPANVV 443
Query: 319 THALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVE 378
T+ L++ K + +AI F + + G++ N Y ++ + LC+ GRI +
Sbjct: 444 TYTSLIDGLCKNHNLDKAIALFTKMKDL--GVEP--NVYTY----NILIDRLCKSGRIAD 495
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 47/285 (16%)
Query: 77 ARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVH 136
++ + AA + +M GL P +++ L+ NG + A+D + +G GL+P
Sbjct: 150 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 209
Query: 137 ETFVALVRLFGSK-----------------------------------GSATRGLEILAA 161
T+ AL+ F K G G + ++
Sbjct: 210 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 269
Query: 162 MEKLNYDIR---QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKV 218
M L+ I + LI L R + L+ A ++ + GL+ Y++LI+ CK
Sbjct: 270 M--LDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKN 327
Query: 219 GDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTE 278
NA + EM G +N L+ G + A ME ++ +P+
Sbjct: 328 DKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME--KERKQPNVV 385
Query: 279 TYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALL 323
TYN +I+ Y + ++++ LL M+E K + PN T+ ++
Sbjct: 386 TYNVLIKGYCKI---NKLEAANGLLNEMLE--KGLNPNRTTYDIV 425
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 103/258 (39%), Gaps = 13/258 (5%)
Query: 91 DMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKG 150
DM GL P + + L+ + + A L L L + ++ L
Sbjct: 375 DMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSS 434
Query: 151 SATRGLEILAAMEKLNYDIRQAWL-ILIEELVR-NKYLEDANKVFMKGSKGGLRATNEIY 208
L+I+ A+ N + + L +L+ L + K+LE + F K GL A
Sbjct: 435 KFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTS 494
Query: 209 DLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEY 268
+ L+ C+ G+ + EM G + +N L+ G E AF E M
Sbjct: 495 NALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMM- 553
Query: 269 GEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKR--IQPNVKTHALLVEC 326
+ KPDT TYN++++ D V G ++ + K + PN+ T+AL++E
Sbjct: 554 -KQGFKPDTYTYNFLMKGLADKGKMDDV-------GRVLHEAKDHGVVPNIYTYALMLEG 605
Query: 327 FTKYCVVREAIRHFRALI 344
+ + A+ F L+
Sbjct: 606 YCNADRIDNAVSLFNKLV 623
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 113/292 (38%), Gaps = 17/292 (5%)
Query: 47 RTRKKKQPKDDDTALENGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHG 106
+T KK +P N + ++ + + +A N D A EL M + P + +
Sbjct: 306 KTEKKNKP--------NTITYNCLIDGFCKAGNIDKA--RELFGLMNEEQIQPNVVTLNT 355
Query: 107 LVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLN 166
LV G +A++ G GL+ T+ AL+ F + + ++ M
Sbjct: 356 LVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSG 415
Query: 167 YDIRQ-AWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNAL 225
+ LI L + DA+ V + + G Y++LI CK
Sbjct: 416 CSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVY 475
Query: 226 DISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQ 285
++ EME G +N L+S G + A AT + ++ +KP TY VI
Sbjct: 476 EMLNEMEENGVKPDIVTYNTLVSYLGKAG--DFATATKVMKKMIKEGLKPSVVTYGAVIH 533
Query: 286 AYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAI 337
AY ++ D + ++ G M + PN + +L++ K V A+
Sbjct: 534 AYCLKKNID---EAMKIFGEMCST-SMVPPNTVIYNILIDALCKNNDVERAV 581
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 22/324 (6%)
Query: 91 DMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKG 150
+M+ GL P +F+ ++V D A L G+ P +F ++V +F G
Sbjct: 333 EMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNG 392
Query: 151 SATRGLEILAAMEKLNYDIRQA-WLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYD 209
R L M+ + + ILI RN + A K+ + + G Y+
Sbjct: 393 ELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYN 452
Query: 210 LLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYG 269
L+ C+ +A ++ EM G + L+ G A + FE M
Sbjct: 453 TLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLR 512
Query: 270 EDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTK 329
+KPD TYN ++ + + ++ + EL M+ + I P+ + ++L+ F
Sbjct: 513 S--LKPDVVTYNTLMDGFCKVGEMEKAK---ELWYDMIS--REIFPSYISFSILINGFCS 565
Query: 330 YCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAKD 389
+V EA R + + E GIK N + YLRA G + + + L M +
Sbjct: 566 LGLVSEAFRLWDEMK--EKGIKPTLVTCN--TIIKGYLRA----GNLSKANDFLNTMISE 617
Query: 390 NHPIPPRAMILSRKYRTLVSSWIE 413
+PP + Y TL++S+++
Sbjct: 618 G--VPPDCI----TYNTLINSFVK 635
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 114/290 (39%), Gaps = 30/290 (10%)
Query: 112 ALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAME-KLNYDIR 170
LNG A+ L G H T+ L+ G L++L +E KL
Sbjct: 134 CLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNV 193
Query: 171 QAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYE 230
+ +I+ L ++K + DA ++ + + T + LI C VG +A + E
Sbjct: 194 VMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNE 253
Query: 231 MEAAGRMATTFHFNCLLSVQATCG---IPEVAFATFENMEYGEDFMKPDTETYNWVIQAY 287
M + FN L V A C I E M+ G ++P TYN ++ Y
Sbjct: 254 MVMKNINPDAYTFNIL--VDALCKEGKIKEAKNVIAVMMKEG---VEPTVVTYNTLMDGY 308
Query: 288 TRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFE 347
+ + V ++ M R+ PN +++ +++ F K +V EA+ F +
Sbjct: 309 CLVNEVGKAKHVLSIISRM-----RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCC-- 361
Query: 348 GGI---KALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAKDNHPIP 394
GI K +N + LC+ GRI E ++ M N+ IP
Sbjct: 362 RGIAPHKVTYNS---------LIDGLCKAGRIPYAWELVDEM--HNNCIP 400
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 131 GLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLN--YDIRQAWLILIEELVR-NKYLE 187
G+ P + +L+ + +G+ L I+ M++ N +D+ A+ LI+ L+R KY
Sbjct: 596 GIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDV-VAYNALIKGLLRLGKY-- 652
Query: 188 DANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLL 247
D V + + GL Y+ +I C G +ALDI EM++ G M +N L+
Sbjct: 653 DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712
Query: 248 SVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELL 303
G E A + + M E P T+ ++++AY+R+E D++ + E L
Sbjct: 713 GGLCKTGAVEKAESALDEMLVME--FVPTPITHKFLVKAYSRSEKADKILQIHEKL 766
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 137/333 (41%), Gaps = 30/333 (9%)
Query: 86 SELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRL 145
S+L +MI + P ++ L+ + G + A+ + L ++P TF LV
Sbjct: 224 SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283
Query: 146 FGSKGSATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYL----EDANKVFMKGSKGGL 201
+G + +LA M K D + ++ L+ +L A VF ++ G+
Sbjct: 284 LCKEGEMKKARNVLAVMIKQGVD---SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGV 340
Query: 202 RATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFA 261
+ Y ++I CK A+++ EM + T +N L+ G A+
Sbjct: 341 TPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWD 400
Query: 262 TFENMEY-GEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTH 320
M G+ D TY+ ++ A + D+ A L ++D + IQPN+ T+
Sbjct: 401 LVNEMHNRGQ---PADVITYSSLLDALCKNHQVDK----AITLITKIKD-QGIQPNIYTY 452
Query: 321 ALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELL 380
+LV+ K +++A ++ L+ IK H + + + LC+EG E L
Sbjct: 453 TILVDGLCKNGRLKDAQAVYQDLL-----IKGYHLDVKMYNVM---VNGLCKEGLFDEAL 504
Query: 381 EALEAMAKDNHPIPPRAMILSRKYRTLVSSWIE 413
+ M +DN IP + Y TLV + E
Sbjct: 505 SLVSKM-EDNGCIPD-----AVTYETLVRALFE 531
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 176 LIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISY--EMEA 233
+I RN DA +F S G+ Y+ +I+ K G+ S + + + EM A
Sbjct: 254 MISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAK-GEVSFDVVVKFYDEMIA 312
Query: 234 AGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESY 293
G M +N LLSV A+ G+ E+A M++ + PD TYN + +A
Sbjct: 313 NGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDH--RCIVPDVFTYNTYLDTLCKAGQI 370
Query: 294 DRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRAL 343
D + V E + KR+ PNV T++ +++ + K ++ +A+ + +
Sbjct: 371 DLARRVFEEMSS-----KRVWPNVVTYSAMMDGYAKANLLEDALNLYEEM 415