Miyakogusa Predicted Gene

Lj5g3v1264010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1264010.1 Non Characterized Hit- tr|I1NII1|I1NII1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.5,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; PHOSPHATIDYLCHOLINE TRANSFER PROTEIN,NULL;
no description,START-,CUFF.55122.1
         (466 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g078030.1 | mammalian STARD2 lipid-binding START domain pr...   575   e-164
Medtr3g092640.1 | membrane-related protein CP5, putative | HC | ...   447   e-125
Medtr5g007030.1 | mammalian STARD2 lipid-binding START domain pr...   339   3e-93
Medtr5g007030.2 | mammalian STARD2 lipid-binding START domain pr...   312   4e-85
Medtr4g005140.1 | homeobox/lipid-binding domain protein | HC | c...   137   3e-32

>Medtr1g078030.1 | mammalian STARD2 lipid-binding START domain
           protein | HC | chr1:34888325-34884479 | 20130731
          Length = 395

 Score =  575 bits (1483), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 286/391 (73%), Positives = 318/391 (81%), Gaps = 6/391 (1%)

Query: 78  VLNFLVDLAMFIAPLWIAVLVGVVLGWAWKPKWAAAVDSEHAWTNFFHFRSFPWFPNSDL 137
           V++ L +L  FIAPLWIAV+ GVV+GWAWKPKWA   ++    TN F FR  PWF  S+L
Sbjct: 9   VMDILGNLVTFIAPLWIAVIFGVVVGWAWKPKWAIEPNNYSWSTNLFKFR-IPWFNYSEL 67

Query: 138 HNGPEPDPDFSYSTSSGAPSLKGVSSLVTEQDLRQLSKLVEEKDGGLAWIQMMDRSTQTM 197
            N  +P  ++S ++SSG  S KG+ S+VTE DL+ L KLVEEKDGG AWIQMMDRST  M
Sbjct: 68  QN--QPGLEYSATSSSGE-SEKGLRSIVTEHDLQNLCKLVEEKDGGPAWIQMMDRSTPNM 124

Query: 198 SYQAWRRDPESGPPQYRSRTVFEDASAELVRDFFWDDEYRLKWDDMLIHASIIEDCAVTG 257
           +YQAWRRD E+GPPQYRSRTVFEDAS ELVRDFFWDDE+R +WDDMLIHAS I++C VTG
Sbjct: 125 TYQAWRRDQENGPPQYRSRTVFEDASPELVRDFFWDDEFRSRWDDMLIHASTIQECEVTG 184

Query: 258 AMMVHWVRKFPFFCSDREYIIGRRIWNAGNAYYCVTKGVPCSSMPRQNKPKRVDLYYSSF 317
            MMV WVRKFPFFCSDREYIIGRRIW+A   YYCVTKGVPCSS+PRQ+KP+RVDLYYSSF
Sbjct: 185 TMMVQWVRKFPFFCSDREYIIGRRIWDAERTYYCVTKGVPCSSIPRQSKPRRVDLYYSSF 244

Query: 318 CIRPVKSRKDGQLTACEVLLFHYEDMGIPWEIAKLGVRQGMWGAVKKFDPALRIYEKERA 377
            IR VKSRKDGQLT+CEVL FHYEDMGIPWEIAKLGVRQGMWGAVKKFDP LR Y+KER 
Sbjct: 245 FIRAVKSRKDGQLTSCEVLFFHYEDMGIPWEIAKLGVRQGMWGAVKKFDPGLRTYKKERD 304

Query: 378 SGA-LSRCANAAKINTKVTPDYLRCXXXXXXXXXXXXXQDS-SVKPIGRNIPKLLVVGGA 435
           SG  LS CAN AKINTKVT DY+RC             QDS   KPIGR+IPKLLVVGGA
Sbjct: 305 SGVPLSPCANNAKINTKVTADYVRCLEDSTSNLLETENQDSFDDKPIGRSIPKLLVVGGA 364

Query: 436 IALACTLDQGLVTKAVIFGVARRFAKIGRRL 466
           IALACTLDQGLVTKAV+FG+ARRF K GRRL
Sbjct: 365 IALACTLDQGLVTKAVVFGIARRFGKFGRRL 395


>Medtr3g092640.1 | membrane-related protein CP5, putative | HC |
           chr3:42338841-42335197 | 20130731
          Length = 424

 Score =  447 bits (1150), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/427 (52%), Positives = 291/427 (68%), Gaps = 37/427 (8%)

Query: 73  FQKPAVLNFLVDLAMFIAPLWIAVLVGVVLGWAWKPKW----------AAAVDSEHAWTN 122
            + PA+  F     MF++P+ +   +G+++GW WKPKW          A+ +     ++ 
Sbjct: 1   MESPAIWGFYA--TMFMSPMLLVFFLGIIVGWLWKPKWISSLAKSFDLASPISDSPIFSP 58

Query: 123 FFHFRSF-PWFPNSDLHNGPEPDP------------------DFSYSTSSGAPSLKGVSS 163
              + S  P   +S     P PD                   +F  STSS   S +  S+
Sbjct: 59  LKFYSSLSPCVNSSITMQTPNPDSLCINKEINKKGSSSSSPTNFDSSTSSNK-SGEDTSN 117

Query: 164 LVTEQDLRQLSKLVEEKDGGLAWIQMMDRSTQTMSYQAWRRDPESGPPQYRSRTVFEDAS 223
            VT  DL  L KLVEEKDGGL WIQMMD+ST TMSYQAWRR+P+ GPPQYRS T+FEDA+
Sbjct: 118 GVTIDDLHHLYKLVEEKDGGLPWIQMMDKSTPTMSYQAWRREPKDGPPQYRSSTIFEDAT 177

Query: 224 AELVRDFFWDDEYRLKWDDMLIHASIIEDCAVTGAMMVHWVRKFPFFCSDREYIIGRRIW 283
            E+VRD FWDD++R KWDDML++++ +E+C  TG M V W+RKFPFFC DREYIIGRRIW
Sbjct: 178 PEMVRDLFWDDQFRPKWDDMLVNSTTLEECPTTGTMKVQWIRKFPFFCKDREYIIGRRIW 237

Query: 284 NAGNAYYCVTKGVPCSSMPRQNKPKRVDLYYSSFCIRPVKSRKD-GQLTACEVLLFHYED 342
             G +YYC+TKGV C S+PRQ KP+RVD+YYSS+CIR V+S++D GQLTACE+LLFH+E+
Sbjct: 238 ECGRSYYCITKGVDCPSIPRQEKPRRVDVYYSSWCIRAVESKRDNGQLTACEILLFHHEE 297

Query: 343 MGIPWEIAKLGVRQGMWGAVKKFDPALRIYEKERASGA-LSRCANAAKINTKVTPDYLRC 401
           MGIPWEIAKLGVR+GMWG V+K +P LR Y++ +ASGA LSR A  A +NTK++P+YL+ 
Sbjct: 298 MGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEAKASGAPLSRSAFMAGVNTKISPEYLQS 357

Query: 402 XXXXXXXXXXXXXQ-DSSVKPIGRNIPKLLVVGGAIALACTLDQGLVTKAVIFGVARR-- 458
                           S  KP G  +PK+LV+GGA+ALAC+LD+GLVTKAVIFGVA+R  
Sbjct: 358 IGSSDDESLQTESAITSDDKPKGMTVPKMLVIGGAVALACSLDKGLVTKAVIFGVAKRFG 417

Query: 459 FAKIGRR 465
           FA +G+R
Sbjct: 418 FANMGKR 424


>Medtr5g007030.1 | mammalian STARD2 lipid-binding START domain
           protein | HC | chr5:1173758-1179345 | 20130731
          Length = 436

 Score =  339 bits (870), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 180/428 (42%), Positives = 253/428 (59%), Gaps = 35/428 (8%)

Query: 69  LLGIFQKPAVLNFLVDLAMFIAPLWIAVLVGVVLGWAWKPKWAAAV-------------- 114
           ++   +KP++    VD+ +   P+W+AV++G+V+GW+W+P+W   +              
Sbjct: 8   VMEFMKKPSITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLLFIGLRSKFRFLWTV 67

Query: 115 ----DSEHAWTNFFHFRSFP-----W--FPNSDLHNGPEPDP-------DFSYSTSSGAP 156
                +   W  F    +F      W  F N +    P  +           ++  SG  
Sbjct: 68  PPGFGARRLWLAFTALSAFSICRRYWSNFKNKEKVLDPSSNSCSDDATDATKHAARSGDK 127

Query: 157 SLKGVSSLVTEQDLRQLSKLVEEKDGGLAWIQMMDRSTQTMSYQAWRRDPESGPPQYRSR 216
           + +     V E DL  L  L+E KDG + W   M+RST  M Y+AWR D E+G   YRSR
Sbjct: 128 ADERDKDTVREADLEHLLHLLEGKDGEIDWQSFMERSTPNMQYKAWRYDSETGATVYRSR 187

Query: 217 TVFEDASAELVRDFFWDDEYRLKWDDMLIHASIIEDCAVTGAMMVHWVRKFPFFCSDREY 276
           TVFEDA+ ELVRDFFWDD++R KWD ML H  ++++C   G  +VHW++KFPFFCSDREY
Sbjct: 188 TVFEDATPELVRDFFWDDDFRPKWDPMLAHCKVLKECPHNGTSIVHWIKKFPFFCSDREY 247

Query: 277 IIGRRIWNAGNAYYCVTKGVPCSSMPRQNKPKRVDLYYSSFCIRPVKSRK-DGQLTACEV 335
           II RRIW AGNAYYCVTKGVP  S+P+++KP+RVDLY+SS+ I+PV+SRK DGQL+ACEV
Sbjct: 248 IIARRIWQAGNAYYCVTKGVPYPSLPKRDKPRRVDLYFSSWVIKPVESRKGDGQLSACEV 307

Query: 336 LLFHYEDMGIPWEIAKLGVRQGMWGAVKKFDPALRIYEKERASGA-LSRCANAAKINTKV 394
            L H+EDMGIP ++AKLGVR GMWGAVKK    +R Y+  R + A LSRCA  A   T++
Sbjct: 308 TLLHHEDMGIPKDVAKLGVRHGMWGAVKKLHSGMRAYQNARKTDASLSRCALMASKTTRL 367

Query: 395 TPDYLRCXXXXXXXXXXXXXQDSSVKPIGRNIP-KLLVVGGAIALACTLDQGLVTKAVIF 453
           + +                   ++ + IG  +  K + +GG +A+   +  G V +A++ 
Sbjct: 368 SSNGNLHSLEDASLMEEREQAINNARQIGHGLDWKWVALGGTVAVVLGIHSGAVGRALLL 427

Query: 454 GVARRFAK 461
           G   RFA+
Sbjct: 428 GAGHRFAR 435


>Medtr5g007030.2 | mammalian STARD2 lipid-binding START domain
           protein | HC | chr5:1173861-1179345 | 20130731
          Length = 326

 Score =  312 bits (800), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 160/323 (49%), Positives = 212/323 (65%), Gaps = 6/323 (1%)

Query: 145 PDFSYSTS---SGAPSLKGVSSLVTEQDLRQLSKLVEEKDGGLAWIQMMDRSTQTMSYQA 201
           P+ +Y      SG  + +     V E DL  L  L+E KDG + W   M+RST  M Y+A
Sbjct: 3   PNINYQIDVPMSGDKADERDKDTVREADLEHLLHLLEGKDGEIDWQSFMERSTPNMQYKA 62

Query: 202 WRRDPESGPPQYRSRTVFEDASAELVRDFFWDDEYRLKWDDMLIHASIIEDCAVTGAMMV 261
           WR D E+G   YRSRTVFEDA+ ELVRDFFWDD++R KWD ML H  ++++C   G  +V
Sbjct: 63  WRYDSETGATVYRSRTVFEDATPELVRDFFWDDDFRPKWDPMLAHCKVLKECPHNGTSIV 122

Query: 262 HWVRKFPFFCSDREYIIGRRIWNAGNAYYCVTKGVPCSSMPRQNKPKRVDLYYSSFCIRP 321
           HW++KFPFFCSDREYII RRIW AGNAYYCVTKGVP  S+P+++KP+RVDLY+SS+ I+P
Sbjct: 123 HWIKKFPFFCSDREYIIARRIWQAGNAYYCVTKGVPYPSLPKRDKPRRVDLYFSSWVIKP 182

Query: 322 VKSRK-DGQLTACEVLLFHYEDMGIPWEIAKLGVRQGMWGAVKKFDPALRIYEKERASGA 380
           V+SRK DGQL+ACEV L H+EDMGIP ++AKLGVR GMWGAVKK    +R Y+  R + A
Sbjct: 183 VESRKGDGQLSACEVTLLHHEDMGIPKDVAKLGVRHGMWGAVKKLHSGMRAYQNARKTDA 242

Query: 381 -LSRCANAAKINTKVTPDYLRCXXXXXXXXXXXXXQDSSVKPIGRNIP-KLLVVGGAIAL 438
            LSRCA  A   T+++ +                   ++ + IG  +  K + +GG +A+
Sbjct: 243 SLSRCALMASKTTRLSSNGNLHSLEDASLMEEREQAINNARQIGHGLDWKWVALGGTVAV 302

Query: 439 ACTLDQGLVTKAVIFGVARRFAK 461
              +  G V +A++ G   RFA+
Sbjct: 303 VLGIHSGAVGRALLLGAGHRFAR 325


>Medtr4g005140.1 | homeobox/lipid-binding domain protein | HC |
           chr4:85012-80984 | 20130731
          Length = 381

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 27/295 (9%)

Query: 161 VSSLVTEQDLRQLSKLVEEKDGGL----AWIQMMDRSTQTMSYQAWRRDPESGPPQYRSR 216
            S +VT +DL+ L  +    DG L     W  ++D+    + Y A    P++GP +Y S 
Sbjct: 68  TSKIVTNEDLKFLMMIF---DGNLNENAKWEDVIDKRNDHLCYNAKSCKPKNGPLRYLSV 124

Query: 217 TVFEDASAELVRDFFWDDEYRLKWDDMLIHASIIEDCAVTGAMMVHWVRKFPFFCSDREY 276
           TVF + SAE++R+F+ D++YR +WD  ++  + ++     G+ +   V+KFP     REY
Sbjct: 125 TVFNNISAEMLRNFYMDNDYRKQWDKTVVEHNQLQVDKSDGSEVGRTVKKFPLL-KPREY 183

Query: 277 IIGRRIWNAGN-AYYCVTKGVPCSSMPRQNKPKRVDLYYSSFCIRPVKSRKDGQLTACEV 335
           ++  ++W   +  +YC  K    +  PRQNK  RV+ + S + IR V  R      ACE+
Sbjct: 184 VLTWKLWEGRDKTFYCYIKECEHTLAPRQNKYVRVEFFRSGWRIRQVPGR-----NACEI 238

Query: 336 LLFHYEDMGIPWEIAKLGVRQGMWGAVKKFDPALRIYEKERASGALSRCANAAKINTKVT 395
            +FH ED G+  E+AKL   +G+W  V K D ALR Y    ASG LS    ++    +  
Sbjct: 239 TMFHQEDAGLNVEMAKLAFSKGIWSYVCKMDNALRRYSA--ASGHLSSSVTSSVNLMQKV 296

Query: 396 PDYLRCXXXXXXXXXXXXXQD-----SSVKPIGRNIPK------LLVVGGAIALA 439
           P  L                D     S V+ I R   +      +L+VGGAI L+
Sbjct: 297 PACLESSTSYASSSHPTIIHDQTTHESQVRVISRRPSRKFLANSVLLVGGAICLS 351