Miyakogusa Predicted Gene

Lj5g3v1262960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1262960.1 tr|Q9ZSQ5|Q9ZSQ5_ASTPN Granule-bound glycogen
(Starch) synthase OS=Astragalus penduliflorus PE=2
SV=,52.69,0.00000000000003, ,CUFF.55104.1
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g078000.2 | granule bound starch synthase I, putative | HC...    64   3e-11
Medtr1g078000.1 | granule bound starch synthase I, putative | HC...    64   3e-11

>Medtr1g078000.2 | granule bound starch synthase I, putative | HC
          | chr1:34876696-34871897 | 20130731
          Length = 608

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/95 (49%), Positives = 54/95 (56%), Gaps = 10/95 (10%)

Query: 1  MATVTASSYAVSRSACLNRHGRTDSAAAKVNSVTLGGH---ALVYDGLRSLNKLHVRSAR 57
          MAT+  SS      ACLN  GR   A  KVN   L  H   A  Y GLRSLNKLHVRS  
Sbjct: 1  MATMRGSSVG----ACLNFQGR--RAEPKVNLTQLTLHNNQAFTYVGLRSLNKLHVRSTA 54

Query: 58 AVKGLSSTASDGGAARGKASGEVVC-GMNLVFVGA 91
               SS+ +   +  GK +G++VC GMNLVFVGA
Sbjct: 55 RAATSSSSKTSEKSGSGKFNGKIVCGGMNLVFVGA 89


>Medtr1g078000.1 | granule bound starch synthase I, putative | HC
          | chr1:34876958-34871801 | 20130731
          Length = 608

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/95 (49%), Positives = 54/95 (56%), Gaps = 10/95 (10%)

Query: 1  MATVTASSYAVSRSACLNRHGRTDSAAAKVNSVTLGGH---ALVYDGLRSLNKLHVRSAR 57
          MAT+  SS      ACLN  GR   A  KVN   L  H   A  Y GLRSLNKLHVRS  
Sbjct: 1  MATMRGSSVG----ACLNFQGR--RAEPKVNLTQLTLHNNQAFTYVGLRSLNKLHVRSTA 54

Query: 58 AVKGLSSTASDGGAARGKASGEVVC-GMNLVFVGA 91
               SS+ +   +  GK +G++VC GMNLVFVGA
Sbjct: 55 RAATSSSSKTSEKSGSGKFNGKIVCGGMNLVFVGA 89