Miyakogusa Predicted Gene

Lj5g3v1237800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1237800.1 Non Characterized Hit- tr|K3Y583|K3Y583_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009371,40.52,9e-17,seg,NULL; bHLH-MYC_N,Transcription factor
MYC/MYB N-terminal,CUFF.55087.1
         (135 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077640.1 | bHLH transcription factor-like protein | HC | ...   147   2e-36
Medtr4g051565.1 | bHLH transcription factor-like protein | HC | ...    51   3e-07
Medtr4g051565.2 | bHLH transcription factor-like protein | HC | ...    51   3e-07
Medtr4g051565.3 | bHLH transcription factor-like protein | HC | ...    48   3e-06

>Medtr1g077640.1 | bHLH transcription factor-like protein | HC |
           chr1:34667193-34671948 | 20130731
          Length = 767

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/133 (57%), Positives = 92/133 (69%), Gaps = 14/133 (10%)

Query: 3   MTMEVSHSTLRNKLKTLCSYEHGWSYAVFWRFHPRNSLMLIMXXXXXXXXXXXDIAHVLP 62
           M M +S S LRNKLKTLC+Y  GWSYA+FWRFH RN ++L +           +I  ++P
Sbjct: 1   MEMAMSFS-LRNKLKTLCAYGDGWSYAIFWRFHQRNPMLLNVEETYYEEQLGEEITKIVP 59

Query: 63  QMHLLGEGIVGEAAFSGKHSWVHSDSQTQEWNFTGQNTTEDDSGLHQQFSNG-IKTIVVI 121
           Q+HLLGEGIVGEAAF+GKHSW+HS S            +EDDSGL+QQ S+G IKTIV I
Sbjct: 60  QVHLLGEGIVGEAAFTGKHSWLHSVS------------SEDDSGLYQQLSSGIIKTIVAI 107

Query: 122 PVKACGVVQFVSK 134
           PV ACGVV F S+
Sbjct: 108 PVNACGVVLFGSR 120


>Medtr4g051565.1 | bHLH transcription factor-like protein | HC |
           chr4:18510285-18517807 | 20130731
          Length = 921

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 45/161 (27%)

Query: 12  LRNKLKTLCSYEHGWSYAVFWR---------------FHPRNSLML-------------- 42
           L+  LKTLC+    WSYAVFW+               + P  S  L              
Sbjct: 5   LKEALKTLCARNQ-WSYAVFWKIGCNNSKLLIWEDCYYEPLPSTFLPQNVGTSNLPYQDR 63

Query: 43  ----IMXXXXXXXXXXXDIAHVLPQM------HLLGEGIVGEAAFSGKHSWVHSDSQTQE 92
                             +  ++ +M      ++ G+GI+G AAF+G H W+  ++  ++
Sbjct: 64  EGCWFSSDSQLRIQEDDRVCSLINKMMVNNSVNVAGQGILGRAAFTGNHQWILLNNFIKD 123

Query: 93  WNFTGQNTTEDDSGLHQQFSNGIKTIVVIPVKACGVVQFVS 133
             +  +   E    +H QFS G++T+VVIPV   GVVQ  S
Sbjct: 124 V-YPPEVLNE----VHCQFSAGMQTVVVIPVLPHGVVQLGS 159


>Medtr4g051565.2 | bHLH transcription factor-like protein | HC |
           chr4:18510285-18518000 | 20130731
          Length = 921

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 45/161 (27%)

Query: 12  LRNKLKTLCSYEHGWSYAVFWR---------------FHPRNSLML-------------- 42
           L+  LKTLC+    WSYAVFW+               + P  S  L              
Sbjct: 5   LKEALKTLCARNQ-WSYAVFWKIGCNNSKLLIWEDCYYEPLPSTFLPQNVGTSNLPYQDR 63

Query: 43  ----IMXXXXXXXXXXXDIAHVLPQM------HLLGEGIVGEAAFSGKHSWVHSDSQTQE 92
                             +  ++ +M      ++ G+GI+G AAF+G H W+  ++  ++
Sbjct: 64  EGCWFSSDSQLRIQEDDRVCSLINKMMVNNSVNVAGQGILGRAAFTGNHQWILLNNFIKD 123

Query: 93  WNFTGQNTTEDDSGLHQQFSNGIKTIVVIPVKACGVVQFVS 133
             +  +   E    +H QFS G++T+VVIPV   GVVQ  S
Sbjct: 124 V-YPPEVLNE----VHCQFSAGMQTVVVIPVLPHGVVQLGS 159


>Medtr4g051565.3 | bHLH transcription factor-like protein | HC |
           chr4:18512464-18517807 | 20130731
          Length = 833

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 5/70 (7%)

Query: 64  MHLLGEGIVGEAAFSGKHSWVHSDSQTQEWNFTGQNTTEDDSGLHQQFSNGIKTIVVIPV 123
           +++ G+GI+G AAF+G H W+  ++  ++  +  +   E    +H QFS G++T+VVIPV
Sbjct: 7   VNVAGQGILGRAAFTGNHQWILLNNFIKDV-YPPEVLNE----VHCQFSAGMQTVVVIPV 61

Query: 124 KACGVVQFVS 133
              GVVQ  S
Sbjct: 62  LPHGVVQLGS 71